BLASTX nr result
ID: Coptis25_contig00013065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00013065
(838 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera] 143 1e-39
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation... 143 1e-39
emb|CBI29961.3| unnamed protein product [Vitis vinifera] 143 1e-39
gb|AAL13083.1| putative translation-initiation factor 3 subunit ... 138 6e-38
ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation... 133 8e-38
>emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]
Length = 1047
Score = 143 bits (361), Expect(4) = 1e-39
Identities = 76/126 (60%), Positives = 95/126 (75%)
Frame = -3
Query: 776 MICAMLLEVPNMAVTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSK 597
+ICAMLLEVPNMA DAK KVISKTFR+LLE S+R FT ENVRD +M A+ ALSK
Sbjct: 638 LICAMLLEVPNMAANTHDAKRKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSK 697
Query: 596 GDFQTSFNVIQSFGFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQPTT 417
GDFQ +F+VI+S FW L +R+ DVLEML++KIKEEA+R FTYS Y++ S+DQ T
Sbjct: 698 GDFQKAFDVIKSLDFWKLLRNRE-DVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTK 756
Query: 416 TLNISK 399
++S+
Sbjct: 757 MFDLSE 762
Score = 44.7 bits (104), Expect(4) = 1e-39
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1
Query: 838 RRQMPYHMHINLELLDAVHLI 776
RRQMPYHMHINLELL+ VHLI
Sbjct: 619 RRQMPYHMHINLELLEGVHLI 639
Score = 22.3 bits (46), Expect(4) = 1e-39
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 285 LTKQLPVLDESNCKVFEARTWRIGCNAPM 199
LT +L +L E+N + +EA+ G + P+
Sbjct: 806 LTDKLTILAENNERAYEAKIGGGGLDLPL 834
Score = 20.4 bits (41), Expect(4) = 1e-39
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1
Query: 397 TIEHGMVSKMMII 359
T+ H ++SKMM++
Sbjct: 763 TLTHSIISKMMVM 775
>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
[Vitis vinifera]
Length = 946
Score = 143 bits (361), Expect(4) = 1e-39
Identities = 76/126 (60%), Positives = 95/126 (75%)
Frame = -3
Query: 776 MICAMLLEVPNMAVTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSK 597
+ICAMLLEVPNMA DAK KVISKTFR+LLE S+R FT ENVRD +M A+ ALSK
Sbjct: 639 LICAMLLEVPNMAANTHDAKRKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSK 698
Query: 596 GDFQTSFNVIQSFGFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQPTT 417
GDFQ +F+VI+S FW L +R+ DVLEML++KIKEEA+R FTYS Y++ S+DQ T
Sbjct: 699 GDFQKAFDVIKSLDFWKLLRNRE-DVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTK 757
Query: 416 TLNISK 399
++S+
Sbjct: 758 MFDLSE 763
Score = 44.7 bits (104), Expect(4) = 1e-39
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1
Query: 838 RRQMPYHMHINLELLDAVHLI 776
RRQMPYHMHINLELL+ VHLI
Sbjct: 620 RRQMPYHMHINLELLEGVHLI 640
Score = 22.3 bits (46), Expect(4) = 1e-39
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 285 LTKQLPVLDESNCKVFEARTWRIGCNAPM 199
LT +L +L E+N + +EA+ G + P+
Sbjct: 807 LTDKLTILAENNERAYEAKIGGGGLDLPL 835
Score = 20.4 bits (41), Expect(4) = 1e-39
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1
Query: 397 TIEHGMVSKMMII 359
T+ H ++SKMM++
Sbjct: 764 TLTHSIISKMMVM 776
>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 143 bits (361), Expect(4) = 1e-39
Identities = 76/126 (60%), Positives = 95/126 (75%)
Frame = -3
Query: 776 MICAMLLEVPNMAVTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSK 597
+ICAMLLEVPNMA DAK KVISKTFR+LLE S+R FT ENVRD +M A+ ALSK
Sbjct: 559 LICAMLLEVPNMAANTHDAKRKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSK 618
Query: 596 GDFQTSFNVIQSFGFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQPTT 417
GDFQ +F+VI+S FW L +R+ DVLEML++KIKEEA+R FTYS Y++ S+DQ T
Sbjct: 619 GDFQKAFDVIKSLDFWKLLRNRE-DVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTK 677
Query: 416 TLNISK 399
++S+
Sbjct: 678 MFDLSE 683
Score = 44.7 bits (104), Expect(4) = 1e-39
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1
Query: 838 RRQMPYHMHINLELLDAVHLI 776
RRQMPYHMHINLELL+ VHLI
Sbjct: 540 RRQMPYHMHINLELLEGVHLI 560
Score = 22.3 bits (46), Expect(4) = 1e-39
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 285 LTKQLPVLDESNCKVFEARTWRIGCNAPM 199
LT +L +L E+N + +EA+ G + P+
Sbjct: 727 LTDKLTILAENNERAYEAKIGGGGLDLPL 755
Score = 20.4 bits (41), Expect(4) = 1e-39
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1
Query: 397 TIEHGMVSKMMII 359
T+ H ++SKMM++
Sbjct: 684 TLTHSIISKMMVM 696
>gb|AAL13083.1| putative translation-initiation factor 3 subunit [Prunus avium]
Length = 934
Score = 138 bits (348), Expect(3) = 6e-38
Identities = 81/153 (52%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Frame = -3
Query: 776 MICAMLLEVPNMAVTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSK 597
+ICAMLLEVPNMA + DAK ++ISKTFR+LLE S++ FT ENVRD +M AS AL K
Sbjct: 629 LICAMLLEVPNMAANIHDAKRRLISKTFRRLLEVSEKQTFTGPPENVRDHVMAASRALGK 688
Query: 596 GDFQTSFNVIQSFGFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQPTT 417
GDFQ +F+VI S W L +R+N VLEMLK+KIKEEA+R FTYS Y + S++QPT
Sbjct: 689 GDFQKAFDVINSLDVWKLLPNREN-VLEMLKAKIKEEALR-TYFTYSSSYKTLSLEQPTK 746
Query: 416 TLNISKYYRAWHGEQDDDHI-E*PCANWDQHTR 321
++S+ H + E A+WDQ TR
Sbjct: 747 LFDLSE--AQIHSIVSKMMVNEELFASWDQPTR 777
Score = 43.5 bits (101), Expect(3) = 6e-38
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1
Query: 838 RRQMPYHMHINLELLDAVHLI 776
RRQMPYHMHIN ELL+AVHLI
Sbjct: 610 RRQMPYHMHINPELLEAVHLI 630
Score = 22.7 bits (47), Expect(3) = 6e-38
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 285 LTKQLPVLDESNCKVFEARTWRIGCNAP 202
LT++L +L ESN + EAR G + P
Sbjct: 796 LTEKLAILAESNERATEARIGGGGLDLP 823
>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
[Glycine max]
Length = 926
Score = 133 bits (334), Expect(3) = 8e-38
Identities = 77/153 (50%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
Frame = -3
Query: 776 MICAMLLEVPNMAVTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSK 597
++ AMLLEVPNMA V DAK KVISKTFR+LLE S++ FT ENVRD +M A+ L K
Sbjct: 632 LVSAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRILRK 691
Query: 596 GDFQTSFNVIQSFGFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQPTT 417
GDFQ +F++I S W F+ +RD VLEMLK KIKEEA+R FT+S Y S S+DQ T
Sbjct: 692 GDFQKAFDIIVSLDVWKFVRNRDT-VLEMLKDKIKEEALRTYLFTFSSSYESLSLDQLTK 750
Query: 416 --TLNISKYYRAWHGEQDDDHIE*PCANWDQHT 324
L++S+ + ++ + A+WDQ T
Sbjct: 751 FFDLSVSRTHSIVSRMMINEELH---ASWDQPT 780
Score = 45.8 bits (107), Expect(3) = 8e-38
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -1
Query: 838 RRQMPYHMHINLELLDAVHLI 776
RRQMPYHMHINLELL+AVHL+
Sbjct: 613 RRQMPYHMHINLELLEAVHLV 633
Score = 25.4 bits (54), Expect(3) = 8e-38
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 285 LTKQLPVLDESNCKVFEARTWRIGCNAPM 199
LT++L VL ESN K EAR G + P+
Sbjct: 800 LTEKLSVLAESNEKATEARVGGGGLDLPL 828