BLASTX nr result

ID: Coptis25_contig00013064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013064
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276217.1| PREDICTED: uncharacterized protein LOC100242...   490   e-136
ref|XP_002315294.1| predicted protein [Populus trichocarpa] gi|2...   485   e-134
ref|XP_002534549.1| conserved hypothetical protein [Ricinus comm...   483   e-134
ref|XP_003536360.1| PREDICTED: uncharacterized protein LOC100775...   474   e-131
ref|XP_004142424.1| PREDICTED: uncharacterized protein LOC101205...   469   e-130

>ref|XP_002276217.1| PREDICTED: uncharacterized protein LOC100242744 [Vitis vinifera]
          Length = 282

 Score =  490 bits (1262), Expect = e-136
 Identities = 221/280 (78%), Positives = 246/280 (87%)
 Frame = +3

Query: 171  MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCEGFLQTPLLVVGFVVLIVSLAGF 350
            MYRFSNTVIGFLNLFTLLASIPIIGGGLWMA+SSTTCE FLQTPLLVVGFVVLI+SLAGF
Sbjct: 1    MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLIISLAGF 60

Query: 351  IGACFNVPWALWVYXXXXXXXXXXXXXXXXFGFVVTSQGGGVDVPGRVYKEYRLQDFSEW 530
            IGACFNV WALW+Y                FGFVVTSQGGGV+VPGRVYKEY+L+ +S W
Sbjct: 61   IGACFNVAWALWLYLVVMLFLIGTLLGLTIFGFVVTSQGGGVEVPGRVYKEYQLEKYSSW 120

Query: 531  LKNRVKDPQYWRTIRSCILGSKTCSKLASWTPLDYLEKDMSPVQSGCCKPPTSCNYAMAT 710
            LK+R+KDP YW TIRSCILGS TC+++ASWTPLDYLE+DM+P+QSGCCKPPTSCNYA AT
Sbjct: 121  LKSRIKDPHYWSTIRSCILGSNTCAQIASWTPLDYLERDMTPIQSGCCKPPTSCNYATAT 180

Query: 711  MMSQDPDCYKWNNAMPFLCYECDSCKAGVLEDVRRDWRKLSVLNVVILVFLISIYSIGCC 890
            MM+QD DCY+WNNA   LCYECDSCKAGVLE +RRDW KLSVLN+V+LV LI IYSIGCC
Sbjct: 181  MMTQDADCYRWNNAPNLLCYECDSCKAGVLEHIRRDWHKLSVLNIVMLVLLIGIYSIGCC 240

Query: 891  AFRNSRRSETDHPYGENRMSKVRPRWDYYWWRWLHDRREQ 1010
            AFRN+RRSETD+PYGENRMSKVRPRWD+YWWRW +DR+ Q
Sbjct: 241  AFRNTRRSETDYPYGENRMSKVRPRWDFYWWRWWYDRKNQ 280


>ref|XP_002315294.1| predicted protein [Populus trichocarpa] gi|222864334|gb|EEF01465.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  485 bits (1248), Expect = e-134
 Identities = 221/270 (81%), Positives = 241/270 (89%)
 Frame = +3

Query: 171 MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCEGFLQTPLLVVGFVVLIVSLAGF 350
           MYRFSNTVIGFLNLFTLLASIPIIGGGLWMA+SSTTCEGFLQTPLLVVGFVVLI+SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCEGFLQTPLLVVGFVVLIISLAGF 60

Query: 351 IGACFNVPWALWVYXXXXXXXXXXXXXXXXFGFVVTSQGGGVDVPGRVYKEYRLQDFSEW 530
           IGACF+V WALWVY                FGFVVTSQGGGV+VPGRVYKEYRL+D+S W
Sbjct: 61  IGACFHVAWALWVYLVVMLLLIATLMGLTIFGFVVTSQGGGVEVPGRVYKEYRLEDYSPW 120

Query: 531 LKNRVKDPQYWRTIRSCILGSKTCSKLASWTPLDYLEKDMSPVQSGCCKPPTSCNYAMAT 710
           L+NR+KDP YWRTIRSCILGSKTC+KLASWTPLDYLEKDMSP+QSGCCKPPTSCNY MAT
Sbjct: 121 LRNRIKDPDYWRTIRSCILGSKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYNMAT 180

Query: 711 MMSQDPDCYKWNNAMPFLCYECDSCKAGVLEDVRRDWRKLSVLNVVILVFLISIYSIGCC 890
            + QDPDCY+WNN    LCYECDSCKAGVLEDVRRDWRKLSVLN+V++V LI IYS GCC
Sbjct: 181 AVPQDPDCYRWNNVPTLLCYECDSCKAGVLEDVRRDWRKLSVLNIVMVVLLIGIYSTGCC 240

Query: 891 AFRNSRRSETDHPYGENRMSKVRPRWDYYW 980
           AF+N+RR+ETD+PYGENRM+KVRPRWDYYW
Sbjct: 241 AFQNTRRAETDYPYGENRMTKVRPRWDYYW 270


>ref|XP_002534549.1| conserved hypothetical protein [Ricinus communis]
           gi|223525057|gb|EEF27833.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  483 bits (1242), Expect = e-134
 Identities = 221/270 (81%), Positives = 241/270 (89%)
 Frame = +3

Query: 171 MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCEGFLQTPLLVVGFVVLIVSLAGF 350
           MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCE FLQTPLLVVGFVVLI+SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCESFLQTPLLVVGFVVLIISLAGF 60

Query: 351 IGACFNVPWALWVYXXXXXXXXXXXXXXXXFGFVVTSQGGGVDVPGRVYKEYRLQDFSEW 530
           IGACF+V WALWVY                FGFVVTSQGGGVDVPGRVYKEYRL+D+S W
Sbjct: 61  IGACFHVAWALWVYLVVMLFLIATLMGLTIFGFVVTSQGGGVDVPGRVYKEYRLEDYSPW 120

Query: 531 LKNRVKDPQYWRTIRSCILGSKTCSKLASWTPLDYLEKDMSPVQSGCCKPPTSCNYAMAT 710
           L++RVKDP YWRTIRSCILGS+TC+KLASWTPLDY+EKDMS +QSGCCKPPTSCNY MAT
Sbjct: 121 LRDRVKDPDYWRTIRSCILGSRTCAKLASWTPLDYMEKDMSHIQSGCCKPPTSCNYNMAT 180

Query: 711 MMSQDPDCYKWNNAMPFLCYECDSCKAGVLEDVRRDWRKLSVLNVVILVFLISIYSIGCC 890
           ++ QDPDCY+WNN+   LCYECDSCKAGVLEDVRRDW KLSVLN+V+LV LI IYSIGCC
Sbjct: 181 LVPQDPDCYRWNNSPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVLLIGIYSIGCC 240

Query: 891 AFRNSRRSETDHPYGENRMSKVRPRWDYYW 980
           AFRN+RR+ETD+PYGENRM+KVRPRWDYYW
Sbjct: 241 AFRNTRRAETDYPYGENRMTKVRPRWDYYW 270


>ref|XP_003536360.1| PREDICTED: uncharacterized protein LOC100775780 [Glycine max]
          Length = 283

 Score =  474 bits (1219), Expect = e-131
 Identities = 215/281 (76%), Positives = 243/281 (86%), Gaps = 1/281 (0%)
 Frame = +3

Query: 171  MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCEGFLQTPLLVVGFVVLIVSLAGF 350
            MYRFSNTVIGFLNLFTLLASIPIIG GLWMA+SSTTCE FLQTPLLV+GFVVL+VSLAGF
Sbjct: 1    MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCENFLQTPLLVIGFVVLVVSLAGF 60

Query: 351  IGACFNVPWALWVYXXXXXXXXXXXXXXXXFGFVVTSQGGGVDVPGRVYKEYRLQDFSEW 530
            IGACF+V  ALW+Y                FGF VTS+GGGV+VPGRVYKEYRLQD+S W
Sbjct: 61   IGACFHVACALWLYLVVMLFLIAALMGFTIFGFGVTSKGGGVEVPGRVYKEYRLQDYSPW 120

Query: 531  LKNRVKDPQYWRTIRSCILGSKTCSKLASWTPLDYLEKDMSPVQSGCCKPPTSCNYAMAT 710
            L+ R++DP+YW TIR CILGSKTC KLASWTPLDY+++DMSP+QSGCCKPPT+C Y +AT
Sbjct: 121  LRKRIQDPRYWNTIRGCILGSKTCEKLASWTPLDYMQRDMSPIQSGCCKPPTACTYNVAT 180

Query: 711  -MMSQDPDCYKWNNAMPFLCYECDSCKAGVLEDVRRDWRKLSVLNVVILVFLISIYSIGC 887
             MM+QDPDCY+WNNA   LCYECDSCKAGVLED+R +W KLSVL V +LV LI IYSIGC
Sbjct: 181  TMMTQDPDCYRWNNAPNLLCYECDSCKAGVLEDIRGNWHKLSVLTVTMLVLLIGIYSIGC 240

Query: 888  CAFRNSRRSETDHPYGENRMSKVRPRWDYYWWRWLHDRREQ 1010
            CAFRN+RR+ETD+PYGENRM+KVRPRWDY+WWRWLHDRREQ
Sbjct: 241  CAFRNTRRAETDYPYGENRMTKVRPRWDYHWWRWLHDRREQ 281


>ref|XP_004142424.1| PREDICTED: uncharacterized protein LOC101205675 isoform 1 [Cucumis
            sativus] gi|449449344|ref|XP_004142425.1| PREDICTED:
            uncharacterized protein LOC101205675 isoform 2 [Cucumis
            sativus] gi|449487173|ref|XP_004157518.1| PREDICTED:
            uncharacterized protein LOC101226514 isoform 1 [Cucumis
            sativus] gi|449487176|ref|XP_004157519.1| PREDICTED:
            uncharacterized protein LOC101226514 isoform 2 [Cucumis
            sativus]
          Length = 286

 Score =  469 bits (1208), Expect = e-130
 Identities = 208/284 (73%), Positives = 244/284 (85%), Gaps = 4/284 (1%)
 Frame = +3

Query: 171  MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCEGFLQTPLLVVGFVVLIVSLAGF 350
            MYRFSNT+IGFLNLFTL+ASIPIIGGGLWMA+SSTTCE FLQTPLLVVGFVVL+VSLAGF
Sbjct: 1    MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 351  IGACFNVPWALWVYXXXXXXXXXXXXXXXXFGFVVTSQGGGVDVPG-RVYKEYRLQDFSE 527
            IGACFNV WALWVY                FGF+VT+ GGGV+ PG RVY+EY L+ +S 
Sbjct: 61   IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 528  WLKNRVKDPQYWRTIRSCILGSKTCSKLASWTPLDYLEKDMSPVQSGCCKPPTSCNYAM- 704
            WL+ R+KDP+YW TIRSC+LGSKTC++LASWTPLDYL++DMSP+QSGCCKPPT+CNY M 
Sbjct: 121  WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 705  --ATMMSQDPDCYKWNNAMPFLCYECDSCKAGVLEDVRRDWRKLSVLNVVILVFLISIYS 878
                M+SQDPDCY+WNNA   LCYECDSCKAGVLE+VRRDW KLSVLNVV+++ LI +Y 
Sbjct: 181  AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 879  IGCCAFRNSRRSETDHPYGENRMSKVRPRWDYYWWRWLHDRREQ 1010
            +GCCAFRN++R+ETD+PYG N+M+KVRPRWDYYWWRWLHD++EQ
Sbjct: 241  VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWWRWLHDKKEQ 284


Top