BLASTX nr result

ID: Coptis25_contig00013051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013051
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243...    75   5e-12
emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]    75   5e-12
ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256...    70   2e-10
emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera]    70   2e-10

>ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|222841953|gb|EEE79500.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -2

Query: 351 GHRGINTAHVARSNVLNELPSEQNWRPAGRMRGALSGQAYSAALSQYMVQPTQSVQAASP 172
           G+ G     V+ +  L +L SEQNWRP GRMRG+LSG+AYSAAL ++MVQPTQ  Q   P
Sbjct: 716 GNAGGALPAVSGTEGLVDLASEQNWRPTGRMRGSLSGRAYSAALKEFMVQPTQQTQTPRP 775

Query: 171 PPHTAPPY-SVSQQLQILISNN 109
           PP+  P   S+   LQ L + N
Sbjct: 776 PPNLPPSQSSMPPHLQFLFARN 797


>ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243215 [Vitis vinifera]
          Length = 920

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = -2

Query: 324  VARSNVLNELPSEQNWRPAGRMRGALSGQAYSAALSQYMVQPTQSVQAASPP-PHTAPPY 148
            V+R   L +L SEQNWRP G MRG+L G+AY++AL+Q ++QPTQ  Q+  PP P T+PP 
Sbjct: 814  VSRPESLVDLASEQNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQSTRPPTPITSPPP 873

Query: 147  SVSQQLQILISN 112
                 LQ L++N
Sbjct: 874  GFPPHLQALLTN 885


>emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]
          Length = 901

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = -2

Query: 324  VARSNVLNELPSEQNWRPAGRMRGALSGQAYSAALSQYMVQPTQSVQAASPP-PHTAPPY 148
            V+R   L +L SEQNWRP G MRG+L G+AY++AL+Q ++QPTQ  Q+  PP P T+PP 
Sbjct: 795  VSRPESLVDLASEQNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQSTRPPTPITSPPP 854

Query: 147  SVSQQLQILISN 112
                 LQ L++N
Sbjct: 855  GFPPHLQALLTN 866


>ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256919 [Vitis vinifera]
          Length = 881

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/43 (67%), Positives = 39/43 (90%)
 Frame = -2

Query: 297 LPSEQNWRPAGRMRGALSGQAYSAALSQYMVQPTQSVQAASPP 169
           LP+++NWRP+GRMRG+L+G+AYSAAL+Q+M+QPTQ  QA  PP
Sbjct: 783 LPTDENWRPSGRMRGSLTGEAYSAALNQFMLQPTQPTQAPLPP 825


>emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera]
          Length = 845

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/43 (67%), Positives = 39/43 (90%)
 Frame = -2

Query: 297 LPSEQNWRPAGRMRGALSGQAYSAALSQYMVQPTQSVQAASPP 169
           LP+++NWRP+GRMRG+L+G+AYSAAL+Q+M+QPTQ  QA  PP
Sbjct: 744 LPTDENWRPSGRMRGSLTGEAYSAALNQFMLQPTQPTQAPLPP 786


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