BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013043
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...   174   2e-41
ref|NP_196398.2| SNF2 and helicase domain-containing protein [Ar...   171   1e-40
dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana]        171   1e-40
ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...   168   9e-40
ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis ...   168   1e-39

>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score =  174 bits (441), Expect = 2e-41
 Identities = 119/270 (44%), Positives = 145/270 (53%), Gaps = 32/270 (11%)
 Frame = +2

Query: 2    GITAGGVGVDFSSAQNVVFLELPKSVSEMLQAEDRAHRRGQTKAVNIYIFCAKDTSDDLH 181
            G+TAGGVG+DFSSAQNVVFLELP+S S MLQAEDRAHRRGQT AVNIYIFCAKDT D+ H
Sbjct: 609  GVTAGGVGLDFSSAQNVVFLELPQSSSLMLQAEDRAHRRGQTNAVNIYIFCAKDTVDERH 668

Query: 182  WQYLNKSLHRVSSVMNGKYDAVQEIAIGGVSDLRSKER---------------------- 295
            WQYLNKSLHRVSS  NGKYDAV EI + GVS L S                         
Sbjct: 669  WQYLNKSLHRVSSTTNGKYDAVPEIPVDGVSYLESTSEGSSGNQISDKASYAKLSAITED 728

Query: 296  --RAKFVEP-EEYDIQDRTVEAADENHDIKSDNTVCEDMLQTKEDDGDS--DAELVRXXX 460
               AK ++P E +D    T+    E H       V  D    K +   +  D EL     
Sbjct: 729  SCTAKNMQPFENHDEAAGTLIDRSEEHPSYGATAVQTDDFHLKVELASTALDKELYNYIA 788

Query: 461  XXXXXXXXXXXXXXIRRYSEVCTNILTKLELQKEK--LFWAPDGDRNISVQVNEAN---S 625
                          + + +       ++ E++KE+  L    +   ++    NEA+   S
Sbjct: 789  ESESNSDGGISSSKLDKGNG------SEHEIEKEQNPLSQTKETYNHVPALGNEADETFS 842

Query: 626  IPADSLRFEVSQFTGRIHLYTYILGEDSTP 715
                SLRFEVS++TGRIHLY+ ILG D  P
Sbjct: 843  NQVYSLRFEVSKYTGRIHLYSCILGTDPRP 872


>ref|NP_196398.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
            gi|332003824|gb|AED91207.1| SNF2 and helicase
            domain-containing protein [Arabidopsis thaliana]
          Length = 1190

 Score =  171 bits (433), Expect = 1e-40
 Identities = 111/248 (44%), Positives = 144/248 (58%), Gaps = 10/248 (4%)
 Frame = +2

Query: 2    GITAGGVGVDFSSAQNVVFLELPKSVSEMLQAEDRAHRRGQTKAVNIYIFCAKDTSDDLH 181
            G+ AGGVG+DFS+AQNVVFLELPK+ S +LQAEDRAHRRGQT AVN+YIFCAKDT D+ +
Sbjct: 612  GVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESN 671

Query: 182  WQYLNKSLHRVSSVMNGKYDAVQEIAIGGVSDLR----SKERRAKFVEPEEYD--IQDRT 343
            WQ LNK LHR+SS  +GKYD   EI IGG S  +    S ER     +P E +  + D+ 
Sbjct: 672  WQNLNKKLHRISSTTDGKYDGKTEIEIGGASIFKPAEESSEREVLEGQPSESNTVVADKI 731

Query: 344  VEAADE-NHDIKSDNTVCEDMLQTKEDDGDSDAELVRXXXXXXXXXXXXXXXXXIRRYSE 520
            VE+ D+   +    NT+        +DD  S  E++                  +R    
Sbjct: 732  VESCDDPGTETDVSNTI------DLKDDMTSQLEILE-----VCPFVENGSGSGMRSSGT 780

Query: 521  VCTNILTK--LELQKEKLFWAPDGDRNISVQVNEANSIP-ADSLRFEVSQFTGRIHLYTY 691
            +   +L +   E  K K   A DG   +  +V+ ++  P  DSLRFEVSQ TGRIHLY+ 
Sbjct: 781  ISLTMLAQENQENHKPKNLIADDG---LVKEVDSSSIFPLIDSLRFEVSQNTGRIHLYSC 837

Query: 692  ILGEDSTP 715
            I G+D  P
Sbjct: 838  IPGKDPRP 845


>dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1178

 Score =  171 bits (433), Expect = 1e-40
 Identities = 111/248 (44%), Positives = 144/248 (58%), Gaps = 10/248 (4%)
 Frame = +2

Query: 2    GITAGGVGVDFSSAQNVVFLELPKSVSEMLQAEDRAHRRGQTKAVNIYIFCAKDTSDDLH 181
            G+ AGGVG+DFS+AQNVVFLELPK+ S +LQAEDRAHRRGQT AVN+YIFCAKDT D+ +
Sbjct: 600  GVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESN 659

Query: 182  WQYLNKSLHRVSSVMNGKYDAVQEIAIGGVSDLR----SKERRAKFVEPEEYD--IQDRT 343
            WQ LNK LHR+SS  +GKYD   EI IGG S  +    S ER     +P E +  + D+ 
Sbjct: 660  WQNLNKKLHRISSTTDGKYDGKTEIEIGGASIFKPAEESSEREVLEGQPSESNTVVADKI 719

Query: 344  VEAADE-NHDIKSDNTVCEDMLQTKEDDGDSDAELVRXXXXXXXXXXXXXXXXXIRRYSE 520
            VE+ D+   +    NT+        +DD  S  E++                  +R    
Sbjct: 720  VESCDDPGTETDVSNTI------DLKDDMTSQLEILE-----VCPFVENGSGSGMRSSGT 768

Query: 521  VCTNILTK--LELQKEKLFWAPDGDRNISVQVNEANSIP-ADSLRFEVSQFTGRIHLYTY 691
            +   +L +   E  K K   A DG   +  +V+ ++  P  DSLRFEVSQ TGRIHLY+ 
Sbjct: 769  ISLTMLAQENQENHKPKNLIADDG---LVKEVDSSSIFPLIDSLRFEVSQNTGRIHLYSC 825

Query: 692  ILGEDSTP 715
            I G+D  P
Sbjct: 826  IPGKDPRP 833


>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score =  168 bits (426), Expect = 9e-40
 Identities = 117/272 (43%), Positives = 149/272 (54%), Gaps = 34/272 (12%)
 Frame = +2

Query: 2   GITAGGVGVDFSSAQNVVFLELPKSVSEMLQAEDRAHRRGQTKAVNIYIFCAKDTSDDLH 181
           GITAGGVG+DFSSAQNVVFLELP+S S MLQAEDRAHRRGQ+ AVNIYIFCAKDT D+  
Sbjct: 120 GITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQSNAVNIYIFCAKDTMDETC 179

Query: 182 WQYLNKSLHRVSSVMNGKYDAVQEIAIGGVSDLRSKE---RRAKFVE---PEEYDIQDRT 343
           WQ LNKSLHRVSS+ +GKYDAV EI +  +S     +   RR+  V+   P+   + D  
Sbjct: 180 WQNLNKSLHRVSSITDGKYDAVPEILVERISYFGKSDKGIRRSSEVQVKLPDSGSVWDSQ 239

Query: 344 VEAADENHDIK------------------SDNTVCEDMLQTKEDDGDSDAELVRXXXXXX 469
               D+  ++                    DN   +D +  K  +G S+ E         
Sbjct: 240 PFKTDDEENVMLIGSTFQTDDLNLGAVMVLDNVTDKDSVANKNLEGISEIE--------- 290

Query: 470 XXXXXXXXXXXIRRYSEVCTNILTK-----LELQKEKLFWAPDGDRNIS--VQVNEAN-- 622
                      IR  S V ++  ++      + +KE        + N S   Q NEA+  
Sbjct: 291 -----------IRSSSRVSSSESSEGHEGNDQSEKENKLCVQTTETNDSELAQQNEADEC 339

Query: 623 -SIPADSLRFEVSQFTGRIHLYTYILGEDSTP 715
            S    SLRFEVS++TGRIHLY+ ILG+DS P
Sbjct: 340 WSNEVYSLRFEVSKYTGRIHLYSCILGKDSRP 371


>ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319162|gb|EFH49584.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1194

 Score =  168 bits (425), Expect = 1e-39
 Identities = 109/247 (44%), Positives = 143/247 (57%), Gaps = 9/247 (3%)
 Frame = +2

Query: 2    GITAGGVGVDFSSAQNVVFLELPKSVSEMLQAEDRAHRRGQTKAVNIYIFCAKDTSDDLH 181
            G+ AGGVG+DFS+AQNVVFLELPK+ S +LQAEDRAHRRGQT AVN+YIFCAKDT D+ +
Sbjct: 617  GVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESN 676

Query: 182  WQYLNKSLHRVSSVMNGKYDAVQEIAIGGV----SDLRSKERRAKFVEPEEYD--IQDRT 343
            WQ LNK LHR+SS  +GKYD   EI I        D  S ER     +P + +  + D+ 
Sbjct: 677  WQNLNKKLHRISSTTDGKYDGKTEIEIERAYIFKPDEESSEREVLEAQPSKANTVVADKI 736

Query: 344  VEAADENHDIKSDNTVCEDMLQTKEDDGDSDAELVRXXXXXXXXXXXXXXXXXIRRYSEV 523
            VE+ D   D+ S+  V   +    +DD  S  E++                  +R    +
Sbjct: 737  VESCD---DLGSETDVSNTI--DLKDDMTSHLEILE-----VCKFVENGSGSEMRSSGTI 786

Query: 524  CTNILTK--LELQKEKLFWAPDGDRNISVQVNEANSIP-ADSLRFEVSQFTGRIHLYTYI 694
            C  +L +   E  + K   A DG   +  + + ++  P  DSLRFEVSQ TGRIHLY+ I
Sbjct: 787  CLTMLDQENQENHQPKNLIADDG---LVKEFDSSSIFPLIDSLRFEVSQNTGRIHLYSCI 843

Query: 695  LGEDSTP 715
            LG+D  P
Sbjct: 844  LGKDPRP 850