BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013042
         (1566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...   203   1e-49
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...   175   3e-41
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]   170   1e-39
ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein...   166   2e-38
emb|CBI23315.3| unnamed protein product [Vitis vinifera]              149   2e-33

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
            vinifera]
          Length = 610

 Score =  203 bits (516), Expect = 1e-49
 Identities = 159/484 (32%), Positives = 242/484 (50%), Gaps = 36/484 (7%)
 Frame = +1

Query: 100  DQEAMESQDRISDLPDSMLLHILSFLSMKEVVLTGVLSKRWDHLWTKAMHLRYLGPRITT 279
            D+E    +D IS+L DS+L+ ILSFL MK VV T +LSKRW  LWT         P +  
Sbjct: 66   DEEISSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV-------PNLVF 118

Query: 280  SYKEDKERFFKFVIHTLHLRETNPIEEFSLDFPLSEHSPLEITILSIHVFTWIHFAVKRK 459
             ++   E F   +  TL L + + I++F +DF         + +       WI  A ++ 
Sbjct: 119  RFRRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV-------WIRHATRKN 171

Query: 460  VKIICLDFSNNDYFLRSQIPFK--LPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGELC 633
            V+ + L F    +   S + +   LP  L++  S+  LSL +C I     ISW SL  L 
Sbjct: 172  VEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLS 231

Query: 634  LKEVRLSDDVVQKILSGAPLLVELTLYFCTGMENLNITSRNLKILHLS-------LTSQS 792
            +  V L DD++++ILSG P L  L L+ C G+ +LNITS +LK L ++          +S
Sbjct: 232  IGSVELCDDLIEEILSGCPALESLELHHCFGINSLNITSASLKKLVINRYWDSSHSHHRS 291

Query: 793  KLSISAPYLRTLEIRGGV--ARYNLMKVSSLSMVKIFPGMAIIGSSHQDKLE-------R 945
             L ISAP +++L I G +      +  V SL    +   +A+   + +D  +       +
Sbjct: 292  VLKISAPNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMK 351

Query: 946  LLQSVQHAQYLTLSSHCLQVLYMLEVKGFPTSYSQCSFLELRTDMNKSDFPGIITLLRTC 1125
            LL+SV H + LT+ + C+QVL + E K   +  S    L L T +NK D PGI  LL++ 
Sbjct: 352  LLKSVNHVKALTVGTWCIQVLSIFEGKDLSSLLSNLKCLILDTHLNKWDLPGIANLLQSS 411

Query: 1126 QNLQTLCID-----SDVIYRSIHLYDVPQKYDFDDTNYWSS---LLPFPCLTKTLETVKL 1281
             +L+T  I+     S  I   +  +     ++FD+  YWSS   +L    +   L+TVK+
Sbjct: 412  THLETFVINMISPCSQQISVEVG-FSFTDLHNFDEEKYWSSREGVLANSLI--NLKTVKI 468

Query: 1282 FGF----TGGSSEMRLMEFLLDKAQVLQEMKIYCKTTD------DMLKISQKLLSFRRAS 1431
             G      G      L++FLL  A++L++++I  K           L  +Q LLSF RAS
Sbjct: 469  IGVIWNQPGIELVFGLVKFLLKNARMLEKVEICAKRDSQSRSRWSSLNSAQSLLSFPRAS 528

Query: 1432 PNAV 1443
            PNAV
Sbjct: 529  PNAV 532


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
            gi|222847400|gb|EEE84947.1| f-box family protein [Populus
            trichocarpa]
          Length = 481

 Score =  175 bits (444), Expect = 3e-41
 Identities = 152/507 (29%), Positives = 236/507 (46%), Gaps = 40/507 (7%)
 Frame = +1

Query: 40   ANTFKALPRLTFSVLCCGRSDQ-EAMESQDRISDLPDSMLLHILSFLSMKEVVLTGVLSK 216
            + TF   P L  + L   RS Q +  +  DRIS+LPD ++ HILSFL   + + T +LSK
Sbjct: 16   STTFYRTPNLKNNPLKRPRSCQNKECQKVDRISNLPDPIIQHILSFLPADDAIKTCILSK 75

Query: 217  RWDHLWTKAMHLRYLGPRITTSYKEDKERFFKFVIHTLHLRETNPIEEFSLDFPLSEHSP 396
            RWD +WT   +L +   R   S  ++ E F  FV   L    +  +++F ++F  +E   
Sbjct: 76   RWDSIWTLVPNLIF---RRECSCSQEAENFAVFVDKALMHYCSPKVKKFLVEFEFTE--- 129

Query: 397  LEITILSIHVFTWIHFAVKRKVKIICLDFSNN-----DYFLRSQIPFKLPSPLFSCDSVK 561
                     V +W+ FAV+ KV+ +CL+F        DY+        LP+ L+S    +
Sbjct: 130  ----CFKAQVDSWVDFAVRLKVEELCLEFHREIADDPDYYY-------LPNFLYSNIPAE 178

Query: 562  WLSLAYCIIDRDR--QISWNSLGELCLKEVRLSDDVVQKILSGAPLLVELTLYFCTGMEN 735
             LSL +C +  ++  Q+SW SL  L +    LS+++++ I  G  LL  L L  C G + 
Sbjct: 179  KLSLRFCALSPNKLKQVSWMSLKVLSISYSWLSNEMIKNIFLGCSLLEYLKLNQCCGFDQ 238

Query: 736  LNIT-SRNLKILHL--SLTSQSK-----LSISAPYLRTLEIRGGVARYNLMKVSSLSMVK 891
            +N   S +LK L +  S   + K     ++I  P L +L + G + R N M +   S+V+
Sbjct: 239  INTNFSSSLKDLVVDGSWGPEDKFGDFVITIKGPNLLSLTLAGYMHRANYMLLDVSSLVE 298

Query: 892  IFPGMAIIG----------SSHQDKLERLLQSVQHAQYLTLSSHCLQVLYMLEVKGFPTS 1041
               G  +            S+H+  L  LL+ +QH + LT+ + CLQVL + EVKG  + 
Sbjct: 299  ASIGYRMKSCSHGCRSNWYSAHRSVLHDLLEKLQHVEKLTIGTWCLQVLSISEVKGLSSP 358

Query: 1042 YSQCSFLELRTDMNKSDFPGIITLLRTCQNLQTLCIDSDVIYRSIHLYDVPQKYDFDDTN 1221
             S C +L L   +NK D PGI +LL++  NLQ L I                        
Sbjct: 359  TSACKYLTLNKKINKWDLPGIASLLQSSPNLQKLTI------------------------ 394

Query: 1222 YWSSLLPFPCLTKTLETVKLFGFTGGSSEMRLMEFLLDKAQVLQEMKIYCKTTD------ 1383
               +L+P                          EFLL  A+VL++M I+ +  D      
Sbjct: 395  ---NLMP----------------------SNNFEFLLKNAKVLEKMIIHAQRDDVNRTWM 429

Query: 1384 --------DMLKISQKLLSFRRASPNA 1440
                    ++L+++Q  LS+ RASPNA
Sbjct: 430  SVEAQELMELLELTQAFLSYPRASPNA 456


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score =  170 bits (430), Expect = 1e-39
 Identities = 134/457 (29%), Positives = 230/457 (50%), Gaps = 33/457 (7%)
 Frame = +1

Query: 94   RSDQEAMESQ-DRISDLPDSMLLHILSFLSMKEVVLTGVLSKRWDHLWTKAMHLRYLGPR 270
            RS +   ES+ DRIS+LPD +L+HILSFL M   + TGVLSKR+ + W    +L +    
Sbjct: 24   RSRKNPRESRVDRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVF---- 79

Query: 271  ITTSYKEDKERFFKFVIHTLHLRETN-PIEEFSLDFPLSEHSPLEITILSIHVFTWIHFA 447
                 + + + F  FV   L L + N  +++F++     +   +E ++    V  W+ FA
Sbjct: 80   -DQDSEWEIDDFITFVNRALLLHBPNCKVQKFTIYMDCMDQV-IENSLQEDCVTLWLRFA 137

Query: 448  VKRKVKIICLDFSNNDYFLR------SQIPFKLPSPLFSCDSVKWLSLAYCIIDRDRQIS 609
             ++ V+ + L F++ +  L+          + LP  +F   S + L+  +C       +S
Sbjct: 138  TRKGVEKLNLGFNDEEDPLQLWESRYDSYRYLLPQFIFRHSSFRKLATRFCNFVTYGVVS 197

Query: 610  WNSLGELCLKEVRLSDDVVQKILSGAPLLVELTLYFCTGMENLNITSRNLKILHL----- 774
            W  L  L +    L+++ ++ IL G+P L  L  + C G   +NI S +LK L +     
Sbjct: 198  WAWLKSLSIGYAELNEETIRNILMGSPALECLEFHRCHGFARINICSESLKKLSILEPWA 257

Query: 775  --SLTSQSKLSISAPYLRTLEIRGGVARY-NLMKVSSLSMVKIFPGMA-------IIGSS 924
                  ++ L +SAP +R+LE+ G   +   L+ +SSL   K+   M             
Sbjct: 258  PNDAEGETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMMHQDRNFQYFSED 317

Query: 925  HQDKLERLLQSVQHAQYLTLSSHCLQVLYMLEVKGFPTSYSQCSFLELRTDMNKSDFPGI 1104
            + + L  +L+ + H + LT+ + CL+VL +LE+K  P+  S+  +L L T   K D PGI
Sbjct: 318  YSNMLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGI 377

Query: 1105 ITLLRTCQNLQTLCIDSDVI----YRSIHLYDVPQKY-DFDDTNYW-SSLLPFPCLTKTL 1266
             +LL++  +L+ L ID + +    +    +++   KY D    ++W S    F CL + L
Sbjct: 378  ASLLKSSPDLEKLHIDVNPLNVLKFWEXQVFNNYYKYGDDHGESFWESEEKSFKCLLQNL 437

Query: 1267 ETVKLFGFTGGSSEMR----LMEFLLDKAQVLQEMKI 1365
            + +K+ GF  G  +++     +EFLL  AQVL++M I
Sbjct: 438  KIIKIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVI 474


>ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Cucumis
            sativus] gi|449503744|ref|XP_004162155.1| PREDICTED:
            putative F-box/LRR-repeat protein At3g18150-like [Cucumis
            sativus]
          Length = 512

 Score =  166 bits (420), Expect = 2e-38
 Identities = 141/511 (27%), Positives = 237/511 (46%), Gaps = 58/511 (11%)
 Frame = +1

Query: 88   CGRSDQEAMESQDRISDLPDSMLLHILSFLSMKEVVLTGVLSKRWDHLWTKAMHLR---- 255
            C +  +   +  D IS LP+S+L+ ILS+L  ++ V   ++S R+ +LWT   HL     
Sbjct: 4    CSKRTRTEEDRNDWISQLPESVLVDILSYLPTRDAVKMALIS-RFRNLWTYIHHLSFDEC 62

Query: 256  -YLGPRITTSYKED----KERFFKFVIHTLHLRETNPIEEFSLDFPLSEHSPL------- 399
             Y    I      D     ERF   + H L L E   I+EF L F  +  + +       
Sbjct: 63   AYHDHNIYDGENYDGPHYDERFLNLIRHVLILHERTIIDEFHLKFAFNLFNAIHDDQYNS 122

Query: 400  -----EITILSIHVFTWIHFAVKRKVKIICLDFSNNDYFLRSQIPFKLPSPLFSCDSVKW 564
                 +   ++  + TWI F+++++VK++ +D          ++ ++LP+ + +   +K 
Sbjct: 123  DGYASKERRMASELTTWIKFSLRKQVKVLDIDLLGCG-LSEPEVNYELPTSILTNKYLKE 181

Query: 565  LSLAYCIIDRDRQISWNSLGELCLKEVRLSDDVVQKILSGAPLLVELTLYFCTGMENLNI 744
            LSL  C I+   +I   SL +L LKE+ LSD ++ +IL G P+L EL+L  C G+  L +
Sbjct: 182  LSLTGCGIEEKGRIQLTSLSKLSLKEIMLSDKIMGEILIGCPMLEELSLDGCCGLHKLKL 241

Query: 745  TSRNLKILHLSL-----TSQSKLSISAPYLRTLEIRGGVARYNLMKVSSLSMVKIFPGMA 909
            T+ N+K L + +      S S+L IS P L++LE+ G +    L   +S+    ++    
Sbjct: 242  TTSNIKRLKIIVGWRNEMSNSRLEISCPGLKSLELAGAIHLVQLKYSASIFDASLYYSRT 301

Query: 910  IIGSSH-QDKLERLLQSVQHAQYLTLSSHCLQVLYMLEVKGFPTSYSQCSFLELRTDMNK 1086
             +      +K++ LL  +         +    +  + ++   P   +    +E R    K
Sbjct: 302  FMCERRIYEKVQMLLWKLAEVSVFIPCTWTTLIFTIWDLTYVPIPVAGWKSVEFRLLFTK 361

Query: 1087 SDFPGIITLLRTCQNLQTLCIDSDVIYRSIHLYDVPQK------YDFDDTNYWSSLLP-- 1242
               PGI ++LR    L+TL      IY   +   + ++      YDFD  +YW S     
Sbjct: 362  WHMPGICSILRNSHWLETLTF---YIYPGSYSTFLTEEAKWMEAYDFDGKSYWKSQNGDF 418

Query: 1243 FPCLTKTLETVKLFGFTGGSSEMRLMEFLLDKAQVLQEMKIYCK---------------- 1374
               L K L+TVK++G+      + L+EFLL  A VL++M I  K                
Sbjct: 419  RGGLRKYLKTVKIYGYVTEPYVLELIEFLLKNALVLEKMVISTKKTLQPIHQYELFKDAV 478

Query: 1375 -------TTDDMLKISQKLLSFRRASPNAVV 1446
                   T  ++L+ SQKLL+  RAS +AV+
Sbjct: 479  FDQEDRFTPKELLQFSQKLLTLPRASKSAVI 509


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  149 bits (376), Expect = 2e-33
 Identities = 109/342 (31%), Positives = 169/342 (49%), Gaps = 18/342 (5%)
 Frame = +1

Query: 181  MKEVVLTGVLSKRWDHLWTKAMHLRYLGPRITTSYKEDKERFFKFVIHTLHLRETNPIEE 360
            MK VV T +LSKRW  LWT         P +   ++   E F   +  TL L + + I++
Sbjct: 1    MKYVVATSILSKRWQFLWTMV-------PNLVFRFRRRDEHFVNSIDKTLVLHQNSQIKK 53

Query: 361  FSLDFPLSEHSPLEITILSIHVFTWIHFAVKRKVKIICLDFSNNDYFLRSQIPFK--LPS 534
            F +DF         + +       WI  A ++ V+ + L F    +   S + +   LP 
Sbjct: 54   FLIDFTYQSQFQSSVNV-------WIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQ 106

Query: 535  PLFSCDSVKWLSLAYCIIDRDRQISWNSLGELCLKEVRLSDDVVQKILSGAPLLVELTLY 714
             L++  S+  LSL +C I     ISW SL  L +  V L DD++++ILSG P L  L L+
Sbjct: 107  FLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELH 166

Query: 715  FCTGMENLNITSRNLKILHLS-------LTSQSKLSISAPYLRTLEIRGGV--ARYNLMK 867
             C G+ +LNITS +LK L ++          +S L ISAP +++L I G +      +  
Sbjct: 167  HCFGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKECRVKN 226

Query: 868  VSSLSMVKIFPGMAIIGSSHQDKLE-------RLLQSVQHAQYLTLSSHCLQVLYMLEVK 1026
            V SL    +   +A+   + +D  +       +LL+SV H + LT+ + C+QVL + E K
Sbjct: 227  VPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQVLSIFEGK 286

Query: 1027 GFPTSYSQCSFLELRTDMNKSDFPGIITLLRTCQNLQTLCID 1152
               +  S    L L T +NK D PGI  LL++  +L+T  I+
Sbjct: 287  DLSSLLSNLKCLILDTHLNKWDLPGIANLLQSSTHLETFVIN 328