BLASTX nr result

ID: Coptis25_contig00012994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012994
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273662.1| PREDICTED: dolichol kinase [Vitis vinifera] ...    87   3e-15
ref|NP_190090.2| dolichol kinase [Arabidopsis thaliana] gi|33264...    79   1e-12
emb|CAB89319.1| putative protein [Arabidopsis thaliana]                79   1e-12
gb|AAL67067.1| unknown protein [Arabidopsis thaliana]                  79   1e-12
ref|XP_002523693.1| Transmembrane protein, putative [Ricinus com...    77   4e-12

>ref|XP_002273662.1| PREDICTED: dolichol kinase [Vitis vinifera]
           gi|297734932|emb|CBI17166.3| unnamed protein product
           [Vitis vinifera]
          Length = 564

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 61/171 (35%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
 Frame = -2

Query: 551 VVFVFITRVLFSVPIXXXXXXXXXXXXXXXXXLVEIFLENSKSH--FKARPAASSGILLG 378
           VV +FI+ +LFS P                   ++I L+NS     FK RP ASSGI LG
Sbjct: 13  VVLLFISAILFSTPSSLFSQALVLFLLAIAALFLDIRLDNSNFSVPFKTRPGASSGIFLG 72

Query: 377 SVTLPTVMLSRLIQLSRAPISPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGYL 198
           +VTLP VM+SRLIQLSRA                                     ++GYL
Sbjct: 73  AVTLPAVMISRLIQLSRA----------------------------FSLHEVGIKELGYL 104

Query: 197 VVQYWVVSASCFSVLVFLTLALRRHSVNRRILGGLLSYVVLYTSLCFLSLA 45
            VQYW  SASCF VL+F+ L +RR   N           + ++S C +S A
Sbjct: 105 KVQYWATSASCFGVLIFIFLLMRRSPNNSCSFSSNSPQGLKFSSSCVVSCA 155


>ref|NP_190090.2| dolichol kinase [Arabidopsis thaliana] gi|332644461|gb|AEE77982.1|
           dolichol kinase [Arabidopsis thaliana]
          Length = 569

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
 Frame = -2

Query: 551 VVFVFITRVLFSVPIXXXXXXXXXXXXXXXXXLVEIFLENSK---SHFKARPAASSGILL 381
           VVFV ++R+L S+P+                 LVEI +E S    SHF +R  ASSGILL
Sbjct: 15  VVFVVVSRILLSLPLSLISHGFSLFLLSLSAFLVEIRVETSPFLLSHFSSRRGASSGILL 74

Query: 380 GSVTLPTVMLSRLIQLSRAPISPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGY 201
           G+VTLP+VM+S+L+QLSRA                                     ++ +
Sbjct: 75  GAVTLPSVMISKLVQLSRA----------------------------ISIHEAEQDELAH 106

Query: 200 LVVQYWVVSASCFSVLVFLTLALRRHSVNRRILGG-------LLSYVVLYTSLCFLSLA 45
           + +QYW  SASC ++L++L++ + +   +  +           L+  VLY   CF+SL+
Sbjct: 107 VTMQYWAASASCCAILIYLSVIMSQVRKDESLSSSSIWLTRVSLTGTVLYGVACFVSLS 165


>emb|CAB89319.1| putative protein [Arabidopsis thaliana]
          Length = 598

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
 Frame = -2

Query: 551 VVFVFITRVLFSVPIXXXXXXXXXXXXXXXXXLVEIFLENSK---SHFKARPAASSGILL 381
           VVFV ++R+L S+P+                 LVEI +E S    SHF +R  ASSGILL
Sbjct: 15  VVFVVVSRILLSLPLSLISHGFSLFLLSLSAFLVEIRVETSPFLLSHFSSRRGASSGILL 74

Query: 380 GSVTLPTVMLSRLIQLSRAPISPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGY 201
           G+VTLP+VM+S+L+QLSRA                                     ++ +
Sbjct: 75  GAVTLPSVMISKLVQLSRA----------------------------ISIHEAEQDELAH 106

Query: 200 LVVQYWVVSASCFSVLVFLTLALRRHSVNRRILGG-------LLSYVVLYTSLCFLSLA 45
           + +QYW  SASC ++L++L++ + +   +  +           L+  VLY   CF+SL+
Sbjct: 107 VTMQYWAASASCCAILIYLSVIMSQVRKDESLSSSSIWLTRVSLTGTVLYGVACFVSLS 165


>gb|AAL67067.1| unknown protein [Arabidopsis thaliana]
          Length = 569

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
 Frame = -2

Query: 551 VVFVFITRVLFSVPIXXXXXXXXXXXXXXXXXLVEIFLENSK---SHFKARPAASSGILL 381
           VVFV ++R+L S+P+                 LVEI +E S    SHF +R  ASSGILL
Sbjct: 15  VVFVVVSRILLSLPLSLISHGFSLFLLSLSAFLVEIRVETSPFLLSHFSSRRGASSGILL 74

Query: 380 GSVTLPTVMLSRLIQLSRAPISPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGY 201
           G+VTLP+VM+S+L+QLSRA                                     ++ +
Sbjct: 75  GAVTLPSVMISKLVQLSRA----------------------------ISIHEAEQDELAH 106

Query: 200 LVVQYWVVSASCFSVLVFLTLALRRHSVNRRILGG-------LLSYVVLYTSLCFLSLA 45
           + +QYW  SASC ++L++L++ + +   +  +           L+  VLY   CF+SL+
Sbjct: 107 VTMQYWAASASCCAILIYLSVIMSQVRKDESLSSSSIWLTRVSLTGTVLYGVACFVSLS 165


>ref|XP_002523693.1| Transmembrane protein, putative [Ricinus communis]
           gi|223536997|gb|EEF38633.1| Transmembrane protein,
           putative [Ricinus communis]
          Length = 565

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 53/144 (36%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
 Frame = -2

Query: 551 VVFVFITRVLFSVPIXXXXXXXXXXXXXXXXXLVEIFLE---NSKSHFKARPAASSGILL 381
           VV +FI  +LFS+P+                   EI  E   NS S FK RP ASSGI L
Sbjct: 15  VVILFIGCILFSLPLSLVLHGVVLSIIALFALCTEICSETCSNSLSQFKTRPGASSGIFL 74

Query: 380 GSVTLPTVMLSRLIQLSRAPISPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGY 201
           G++TLP VMLS+LIQLSRA                                     ++ Y
Sbjct: 75  GAITLPAVMLSKLIQLSRA----------------------------FSLHQIESGELNY 106

Query: 200 LVVQYWVVSASCFSVLVFLTLALR 129
           L +QYW  SA C SVL+FL   +R
Sbjct: 107 LAMQYWATSAICMSVLIFLCSVMR 130


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