BLASTX nr result

ID: Coptis25_contig00012988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012988
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172503.1| PREDICTED: small heat shock protein, chlorop...   246   5e-63
ref|XP_004147204.1| PREDICTED: small heat shock protein, chlorop...   238   2e-60
ref|XP_004172504.1| PREDICTED: small heat shock protein, chlorop...   237   3e-60
gb|ADJ57588.1| mitochondrial small heat shock protein [Capsicum ...   234   1e-59
gb|AEX97054.1| mitochondrial heat shock protein [Copaifera offic...   233   6e-59

>ref|XP_004172503.1| PREDICTED: small heat shock protein, chloroplastic-like [Cucumis
           sativus]
          Length = 212

 Score =  246 bits (628), Expect = 5e-63
 Identities = 131/218 (60%), Positives = 166/218 (76%), Gaps = 2/218 (0%)
 Frame = +2

Query: 77  MASSVVLRRASSTASTLLKNKSFFNSLRSTAVAPS-VQRSFNTNAQMTEYDQDDRSSLDI 253
           MASS+ LRR +++++T L     FN +RS +V PS V RSFNTNAQMT YD DDRS +D+
Sbjct: 1   MASSIALRRLAASSATKL-----FNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRS-VDV 54

Query: 254 DRRPGYATRRYDSPASFISDVFDPITPTRSLSQVLNIMDRLMDNPFAIASQGMGGGLRRG 433
           D R   +  R         DVFDP +PTRSLSQVLN+MD+ M++PF  AS+G+G G RRG
Sbjct: 55  DSRSDRSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRG 114

Query: 434 WDAKEDNDALHLRIDMPGLGKEDVKVSVEDNTLTIKG-GDKEASEEEGGRKYSSRIDLPP 610
           WD KED++AL+LR+DMPGL K+DV+VSVE NTL IKG G KE+ +EE  R++SSR+DLP 
Sbjct: 115 WDVKEDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPA 174

Query: 611 NLYKADQIKAEMKNGVLKVSVPKVKEDERKNVHQVNVD 724
           NLY+ + IKAEMKNGVLKV+VPKVKE+ERK+V  V V+
Sbjct: 175 NLYELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 212


>ref|XP_004147204.1| PREDICTED: small heat shock protein, chloroplastic-like [Cucumis
           sativus]
          Length = 213

 Score =  238 bits (606), Expect = 2e-60
 Identities = 129/219 (58%), Positives = 162/219 (73%), Gaps = 3/219 (1%)
 Frame = +2

Query: 77  MASSVVLRRASSTASTLLKNKSFFNSLRSTAVAPS-VQRSFNTNAQMTEYDQDDRSSLDI 253
           MASS+ LR     A T        N +RS ++ PS V RSFNTNAQMT YD DDRS +++
Sbjct: 1   MASSIALR-----ALTAFSAPKLINPVRSASILPSSVPRSFNTNAQMTNYDHDDRS-VEV 54

Query: 254 DRRPGYATRRYDSPAS-FISDVFDPITPTRSLSQVLNIMDRLMDNPFAIASQGMGGGLRR 430
           DRR   +  R   P S F  +VFDP + TRSLSQVLN+MD+ M++PF  AS+G+G G RR
Sbjct: 55  DRRSDRSLSRSRDPYSGFGGNVFDPFSQTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRR 114

Query: 431 GWDAKEDNDALHLRIDMPGLGKEDVKVSVEDNTLTIKG-GDKEASEEEGGRKYSSRIDLP 607
           GWD KED++ L+LR+DMPGLGK+DVKVSVE NTL IKG  +KE+ +EE  R++SSR+DLP
Sbjct: 115 GWDVKEDDNCLYLRMDMPGLGKDDVKVSVEQNTLIIKGEAEKESEDEEDLRRFSSRLDLP 174

Query: 608 PNLYKADQIKAEMKNGVLKVSVPKVKEDERKNVHQVNVD 724
            NLY+ + IKAEMKNGVLKV+VPKVKE+ERK+V  V V+
Sbjct: 175 ANLYELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 213


>ref|XP_004172504.1| PREDICTED: small heat shock protein, chloroplastic-like [Cucumis
           sativus]
          Length = 209

 Score =  237 bits (604), Expect = 3e-60
 Identities = 128/218 (58%), Positives = 160/218 (73%), Gaps = 2/218 (0%)
 Frame = +2

Query: 77  MASSVVLRRASSTASTLLKNKSFFNSLRSTAVAPS-VQRSFNTNAQMTEYDQDDRSSLDI 253
           MASS+ LR     A T        N +RS ++ PS V RSFNTNAQMT YD DDRS +++
Sbjct: 1   MASSIALR-----ALTAFSAPKLINPVRSASILPSSVPRSFNTNAQMTNYDHDDRS-VEV 54

Query: 254 DRRPGYATRRYDSPASFISDVFDPITPTRSLSQVLNIMDRLMDNPFAIASQGMGGGLRRG 433
           DRR   +  R   P    SDVFDP + TRSLSQVLN+MD+ M++PF  AS+G+G G RRG
Sbjct: 55  DRRSDRSLSRSRDP---YSDVFDPFSQTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRG 111

Query: 434 WDAKEDNDALHLRIDMPGLGKEDVKVSVEDNTLTIKG-GDKEASEEEGGRKYSSRIDLPP 610
           WD KED++ L+LR+DMPGL K+DVKVSVE NTL IKG  +KE+ +EE  R++SSR+DLP 
Sbjct: 112 WDVKEDDNCLYLRMDMPGLSKDDVKVSVEQNTLIIKGEAEKESEDEEDRRRFSSRLDLPA 171

Query: 611 NLYKADQIKAEMKNGVLKVSVPKVKEDERKNVHQVNVD 724
           NLY+ + IKAEMKNGVLKV+VPKVKE+ERK+V  V V+
Sbjct: 172 NLYELNSIKAEMKNGVLKVAVPKVKEEERKDVRHVTVE 209


>gb|ADJ57588.1| mitochondrial small heat shock protein [Capsicum annuum]
          Length = 211

 Score =  234 bits (598), Expect = 1e-59
 Identities = 125/220 (56%), Positives = 167/220 (75%), Gaps = 4/220 (1%)
 Frame = +2

Query: 77  MASSVVLRRASSTASTLLKNKSFFNSLRSTAVAPSVQRSFNTNAQMTEYDQDDRSSLDID 256
           MA+S+ LRRA+++          FN L +   + SV RSFNTN QMT YD DDR S++++
Sbjct: 1   MATSLALRRATTSP--------LFNRLVNPVRSASVFRSFNTNTQMTTYDDDDR-SVEVE 51

Query: 257 RRPGYA-TRRYDSPASFISDVFDPITPTRSLSQVLNIMDRLMDNPFAIASQGMGGG--LR 427
           RRP  + +RR D   SF SDVFDP +P RS+SQ+LN+MD++M++PFA A   MG G   R
Sbjct: 52  RRPDRSVSRRQDGLPSFFSDVFDPFSPPRSVSQLLNMMDQMMNSPFAAAPHAMGAGNPSR 111

Query: 428 RGWDAKEDNDALHLRIDMPGLGKEDVKVSVEDNTLTIKG-GDKEASEEEGGRKYSSRIDL 604
           RGWD +ED+DAL++++DMPGL KE+VKV+VE+NTL IKG G+KE+ +EE  R+YS+R+++
Sbjct: 112 RGWDVREDDDALYIKMDMPGLDKENVKVAVEENTLIIKGEGEKESEDEEYRRRYSTRLEI 171

Query: 605 PPNLYKADQIKAEMKNGVLKVSVPKVKEDERKNVHQVNVD 724
           P NLYK D IKAEMKNGVLKV+VPKVKE+ERK+V  V V+
Sbjct: 172 PQNLYKLDGIKAEMKNGVLKVAVPKVKEEERKDVFNVEVE 211


>gb|AEX97054.1| mitochondrial heat shock protein [Copaifera officinalis]
          Length = 214

 Score =  233 bits (593), Expect = 6e-59
 Identities = 123/192 (64%), Positives = 144/192 (75%), Gaps = 2/192 (1%)
 Frame = +2

Query: 155 LRSTAVAPSVQRSFNTNAQMTEYDQDDRSSLDIDRRPGYATRRYDSPASFISDVFDPITP 334
           +R+     S  RSFNTNA M +YD  +  SLD+DRR   +  R D       DVFDP +P
Sbjct: 24  IRTVPRMVSASRSFNTNA-MRDYDDGNGRSLDVDRRSDRSVPRGDRRDDLFPDVFDPFSP 82

Query: 335 TRSLSQVLNIMDRLMDNPFAIASQGMG-GGLRRGWDAKEDNDALHLRIDMPGLGKEDVKV 511
           TRSLSQVLN+MD+ +DNPF  AS+G+G GGLRRGWDAKE  DAL LR+DMPGLGK+DVKV
Sbjct: 83  TRSLSQVLNLMDQFVDNPFLSASRGIGAGGLRRGWDAKETEDALFLRVDMPGLGKDDVKV 142

Query: 512 SVEDNTLTIKG-GDKEASEEEGGRKYSSRIDLPPNLYKADQIKAEMKNGVLKVSVPKVKE 688
           SVE NTL IKG G KE  EE+  R+YSSRIDLP  LYK DQIKAEMKNGVLKV VPK+KE
Sbjct: 143 SVEQNTLIIKGEGGKEEGEEDSARRYSSRIDLPEKLYKIDQIKAEMKNGVLKVVVPKMKE 202

Query: 689 DERKNVHQVNVD 724
           ++R +V+QV VD
Sbjct: 203 EDRSDVYQVKVD 214


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