BLASTX nr result
ID: Coptis25_contig00012972
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012972
(613 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310072.1| predicted protein [Populus trichocarpa] gi|2... 294 1e-77
ref|XP_004148041.1| PREDICTED: thioredoxin-like protein 4A-like ... 293 1e-77
ref|NP_196446.1| mRNA splicing factor, thioredoxin-like U5 snRNP... 292 3e-77
ref|NP_001064903.1| Os10g0486600 [Oryza sativa Japonica Group] g... 292 3e-77
ref|XP_002871315.1| hypothetical protein ARALYDRAFT_908777 [Arab... 292 3e-77
>ref|XP_002310072.1| predicted protein [Populus trichocarpa]
gi|225432821|ref|XP_002283622.1| PREDICTED:
thioredoxin-like protein 4A [Vitis vinifera]
gi|255577696|ref|XP_002529724.1| mitosis protein dim1,
putative [Ricinus communis]
gi|356532239|ref|XP_003534681.1| PREDICTED: DIM protein
[Glycine max] gi|356571707|ref|XP_003554015.1|
PREDICTED: thioredoxin-like protein 4A-like [Glycine
max] gi|118484553|gb|ABK94150.1| unknown [Populus
trichocarpa] gi|222852975|gb|EEE90522.1| predicted
protein [Populus trichocarpa]
gi|223530788|gb|EEF32653.1| mitosis protein dim1,
putative [Ricinus communis] gi|255629203|gb|ACU14946.1|
unknown [Glycine max] gi|297737123|emb|CBI26324.3|
unnamed protein product [Vitis vinifera]
Length = 142
Score = 294 bits (752), Expect = 1e-77
Identities = 142/142 (100%), Positives = 142/142 (100%)
Frame = -2
Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415
MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120
Query: 234 RGARKGRGLVIAPKDYSTKYRY 169
RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142
>ref|XP_004148041.1| PREDICTED: thioredoxin-like protein 4A-like [Cucumis sativus]
gi|317159581|gb|ADV04065.1| mitosis protein YLS8 [Hevea
brasiliensis]
Length = 142
Score = 293 bits (751), Expect = 1e-77
Identities = 141/142 (99%), Positives = 142/142 (100%)
Frame = -2
Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415
MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY
Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
Query: 234 RGARKGRGLVIAPKDYSTKYRY 169
RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142
>ref|NP_196446.1| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis
thaliana] gi|11692866|gb|AAG40036.1|AF324685_1 AT5g08290
[Arabidopsis thaliana]
gi|11908020|gb|AAG41439.1|AF326857_1 unknown protein
[Arabidopsis thaliana]
gi|12642840|gb|AAK00362.1|AF339680_1 unknown protein
[Arabidopsis thaliana]
gi|14030633|gb|AAK52991.1|AF375407_1 AT5g08290/F8L15_20
[Arabidopsis thaliana] gi|10178271|emb|CAC08329.1|
putative protein [Arabidopsis thaliana]
gi|13122294|dbj|BAB32888.1| Dim1 homolog [Arabidopsis
thaliana] gi|17978897|gb|AAL47418.1| AT5g08290/F8L15_20
[Arabidopsis thaliana] gi|332003895|gb|AED91278.1| mRNA
splicing factor, thioredoxin-like U5 snRNP [Arabidopsis
thaliana]
Length = 142
Score = 292 bits (748), Expect = 3e-77
Identities = 140/142 (98%), Positives = 142/142 (100%)
Frame = -2
Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415
MSYLLPHLHSGWAVDQ+ILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1 MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY
Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
Query: 234 RGARKGRGLVIAPKDYSTKYRY 169
RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142
>ref|NP_001064903.1| Os10g0486600 [Oryza sativa Japonica Group]
gi|226498606|ref|NP_001148867.1| LOC100282486 [Zea mays]
gi|297725467|ref|NP_001175097.1| Os07g0202450 [Oryza
sativa Japonica Group] gi|242079123|ref|XP_002444330.1|
hypothetical protein SORBIDRAFT_07g020280 [Sorghum
bicolor] gi|242092472|ref|XP_002436726.1| hypothetical
protein SORBIDRAFT_10g007680 [Sorghum bicolor]
gi|18087886|gb|AAL59040.1|AC087182_23 putative
thioredoxin-like U5 small ribonucleoprotein particle
protein [Oryza sativa Japonica Group]
gi|31432762|gb|AAP54355.1| Thioredoxin-like protein 4A,
putative, expressed [Oryza sativa Japonica Group]
gi|33146577|dbj|BAC79773.1| putative dim1p [Oryza sativa
Japonica Group] gi|50508616|dbj|BAD31005.1| putative
dim1p [Oryza sativa Japonica Group]
gi|113639512|dbj|BAF26817.1| Os10g0486600 [Oryza sativa
Japonica Group] gi|195620258|gb|ACG31959.1| mitosis
protein dim1 [Zea mays] gi|195622740|gb|ACG33200.1|
mitosis protein dim1 [Zea mays]
gi|215686611|dbj|BAG88864.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215768559|dbj|BAH00788.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218199272|gb|EEC81699.1| hypothetical protein
OsI_25296 [Oryza sativa Indica Group]
gi|222613039|gb|EEE51171.1| hypothetical protein
OsJ_31953 [Oryza sativa Japonica Group]
gi|222636632|gb|EEE66764.1| hypothetical protein
OsJ_23479 [Oryza sativa Japonica Group]
gi|241914949|gb|EER88093.1| hypothetical protein
SORBIDRAFT_10g007680 [Sorghum bicolor]
gi|241940680|gb|EES13825.1| hypothetical protein
SORBIDRAFT_07g020280 [Sorghum bicolor]
gi|255677591|dbj|BAH93825.1| Os07g0202450 [Oryza sativa
Japonica Group] gi|414870567|tpg|DAA49124.1| TPA:
mitosis protein dim1 [Zea mays]
Length = 142
Score = 292 bits (748), Expect = 3e-77
Identities = 140/142 (98%), Positives = 142/142 (100%)
Frame = -2
Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415
MSYLLPHLHSGWAVDQAILAEEERLV+IRFGHDWDETCMQMDEVLA+VAETIKNFAVIYL
Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYL 60
Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120
Query: 234 RGARKGRGLVIAPKDYSTKYRY 169
RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142
>ref|XP_002871315.1| hypothetical protein ARALYDRAFT_908777 [Arabidopsis lyrata subsp.
lyrata] gi|297317152|gb|EFH47574.1| hypothetical protein
ARALYDRAFT_908777 [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 292 bits (748), Expect = 3e-77
Identities = 140/142 (98%), Positives = 142/142 (100%)
Frame = -2
Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415
MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVL+SVAETIKNFAVIYL
Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL 60
Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY
Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
Query: 234 RGARKGRGLVIAPKDYSTKYRY 169
RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142