BLASTX nr result
ID: Coptis25_contig00012972
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00012972 (613 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310072.1| predicted protein [Populus trichocarpa] gi|2... 294 1e-77 ref|XP_004148041.1| PREDICTED: thioredoxin-like protein 4A-like ... 293 1e-77 ref|NP_196446.1| mRNA splicing factor, thioredoxin-like U5 snRNP... 292 3e-77 ref|NP_001064903.1| Os10g0486600 [Oryza sativa Japonica Group] g... 292 3e-77 ref|XP_002871315.1| hypothetical protein ARALYDRAFT_908777 [Arab... 292 3e-77 >ref|XP_002310072.1| predicted protein [Populus trichocarpa] gi|225432821|ref|XP_002283622.1| PREDICTED: thioredoxin-like protein 4A [Vitis vinifera] gi|255577696|ref|XP_002529724.1| mitosis protein dim1, putative [Ricinus communis] gi|356532239|ref|XP_003534681.1| PREDICTED: DIM protein [Glycine max] gi|356571707|ref|XP_003554015.1| PREDICTED: thioredoxin-like protein 4A-like [Glycine max] gi|118484553|gb|ABK94150.1| unknown [Populus trichocarpa] gi|222852975|gb|EEE90522.1| predicted protein [Populus trichocarpa] gi|223530788|gb|EEF32653.1| mitosis protein dim1, putative [Ricinus communis] gi|255629203|gb|ACU14946.1| unknown [Glycine max] gi|297737123|emb|CBI26324.3| unnamed protein product [Vitis vinifera] Length = 142 Score = 294 bits (752), Expect = 1e-77 Identities = 142/142 (100%), Positives = 142/142 (100%) Frame = -2 Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60 Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120 Query: 234 RGARKGRGLVIAPKDYSTKYRY 169 RGARKGRGLVIAPKDYSTKYRY Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142 >ref|XP_004148041.1| PREDICTED: thioredoxin-like protein 4A-like [Cucumis sativus] gi|317159581|gb|ADV04065.1| mitosis protein YLS8 [Hevea brasiliensis] Length = 142 Score = 293 bits (751), Expect = 1e-77 Identities = 141/142 (99%), Positives = 142/142 (100%) Frame = -2 Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60 Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120 Query: 234 RGARKGRGLVIAPKDYSTKYRY 169 RGARKGRGLVIAPKDYSTKYRY Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142 >ref|NP_196446.1| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] gi|11692866|gb|AAG40036.1|AF324685_1 AT5g08290 [Arabidopsis thaliana] gi|11908020|gb|AAG41439.1|AF326857_1 unknown protein [Arabidopsis thaliana] gi|12642840|gb|AAK00362.1|AF339680_1 unknown protein [Arabidopsis thaliana] gi|14030633|gb|AAK52991.1|AF375407_1 AT5g08290/F8L15_20 [Arabidopsis thaliana] gi|10178271|emb|CAC08329.1| putative protein [Arabidopsis thaliana] gi|13122294|dbj|BAB32888.1| Dim1 homolog [Arabidopsis thaliana] gi|17978897|gb|AAL47418.1| AT5g08290/F8L15_20 [Arabidopsis thaliana] gi|332003895|gb|AED91278.1| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] Length = 142 Score = 292 bits (748), Expect = 3e-77 Identities = 140/142 (98%), Positives = 142/142 (100%) Frame = -2 Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415 MSYLLPHLHSGWAVDQ+ILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL Sbjct: 1 MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60 Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120 Query: 234 RGARKGRGLVIAPKDYSTKYRY 169 RGARKGRGLVIAPKDYSTKYRY Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142 >ref|NP_001064903.1| Os10g0486600 [Oryza sativa Japonica Group] gi|226498606|ref|NP_001148867.1| LOC100282486 [Zea mays] gi|297725467|ref|NP_001175097.1| Os07g0202450 [Oryza sativa Japonica Group] gi|242079123|ref|XP_002444330.1| hypothetical protein SORBIDRAFT_07g020280 [Sorghum bicolor] gi|242092472|ref|XP_002436726.1| hypothetical protein SORBIDRAFT_10g007680 [Sorghum bicolor] gi|18087886|gb|AAL59040.1|AC087182_23 putative thioredoxin-like U5 small ribonucleoprotein particle protein [Oryza sativa Japonica Group] gi|31432762|gb|AAP54355.1| Thioredoxin-like protein 4A, putative, expressed [Oryza sativa Japonica Group] gi|33146577|dbj|BAC79773.1| putative dim1p [Oryza sativa Japonica Group] gi|50508616|dbj|BAD31005.1| putative dim1p [Oryza sativa Japonica Group] gi|113639512|dbj|BAF26817.1| Os10g0486600 [Oryza sativa Japonica Group] gi|195620258|gb|ACG31959.1| mitosis protein dim1 [Zea mays] gi|195622740|gb|ACG33200.1| mitosis protein dim1 [Zea mays] gi|215686611|dbj|BAG88864.1| unnamed protein product [Oryza sativa Japonica Group] gi|215768559|dbj|BAH00788.1| unnamed protein product [Oryza sativa Japonica Group] gi|218199272|gb|EEC81699.1| hypothetical protein OsI_25296 [Oryza sativa Indica Group] gi|222613039|gb|EEE51171.1| hypothetical protein OsJ_31953 [Oryza sativa Japonica Group] gi|222636632|gb|EEE66764.1| hypothetical protein OsJ_23479 [Oryza sativa Japonica Group] gi|241914949|gb|EER88093.1| hypothetical protein SORBIDRAFT_10g007680 [Sorghum bicolor] gi|241940680|gb|EES13825.1| hypothetical protein SORBIDRAFT_07g020280 [Sorghum bicolor] gi|255677591|dbj|BAH93825.1| Os07g0202450 [Oryza sativa Japonica Group] gi|414870567|tpg|DAA49124.1| TPA: mitosis protein dim1 [Zea mays] Length = 142 Score = 292 bits (748), Expect = 3e-77 Identities = 140/142 (98%), Positives = 142/142 (100%) Frame = -2 Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415 MSYLLPHLHSGWAVDQAILAEEERLV+IRFGHDWDETCMQMDEVLA+VAETIKNFAVIYL Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYL 60 Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120 Query: 234 RGARKGRGLVIAPKDYSTKYRY 169 RGARKGRGLVIAPKDYSTKYRY Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142 >ref|XP_002871315.1| hypothetical protein ARALYDRAFT_908777 [Arabidopsis lyrata subsp. lyrata] gi|297317152|gb|EFH47574.1| hypothetical protein ARALYDRAFT_908777 [Arabidopsis lyrata subsp. lyrata] Length = 142 Score = 292 bits (748), Expect = 3e-77 Identities = 140/142 (98%), Positives = 142/142 (100%) Frame = -2 Query: 594 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 415 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVL+SVAETIKNFAVIYL Sbjct: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL 60 Query: 414 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 235 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY Sbjct: 61 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120 Query: 234 RGARKGRGLVIAPKDYSTKYRY 169 RGARKGRGLVIAPKDYSTKYRY Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142