BLASTX nr result

ID: Coptis25_contig00012968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012968
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95443.1| unknown [Populus trichocarpa]                          189   5e-46
ref|XP_002863762.1| hypothetical protein ARALYDRAFT_494776 [Arab...   186   3e-45
dbj|BAB09328.1| unnamed protein product [Arabidopsis thaliana]        186   4e-45
ref|NP_568607.1| B-cell receptor-associated 31-like protein [Ara...   186   4e-45
gb|AAM62748.1| unknown [Arabidopsis thaliana]                         186   4e-45

>gb|ABK95443.1| unknown [Populus trichocarpa]
          Length = 219

 Score =  189 bits (479), Expect = 5e-46
 Identities = 98/143 (68%), Positives = 119/143 (83%)
 Frame = +2

Query: 119 MIQLLFTVISFEIGLIMILMFKTPLRKLVIMSLDHVKRGRGPVVVKTIGGTVCIVLMSSV 298
           MIQLLFTVI  E+ +I++ +FKTPLRKL+IMSLD VKRGRGPV+VKT+ GTV +VLMSSV
Sbjct: 1   MIQLLFTVIFSEMAMILLFVFKTPLRKLLIMSLDRVKRGRGPVMVKTVAGTVFVVLMSSV 60

Query: 299 YSLIKIQKRSSDSSGGVLNSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 478
           YS++KIQKR  D  GG +N TDQVL +K+LLEA+LMG  LFL LMIDR HHYIRELRM R
Sbjct: 61  YSMVKIQKRWID-DGGAVNPTDQVLLAKHLLEATLMGSILFLGLMIDRLHHYIRELRMRR 119

Query: 479 KSMEDVKKENRAVED*ELRPQKS 547
           K+MEDVKK+NR+ ED ++   K+
Sbjct: 120 KTMEDVKKQNRSFEDGKVEETKA 142


>ref|XP_002863762.1| hypothetical protein ARALYDRAFT_494776 [Arabidopsis lyrata subsp.
           lyrata] gi|297309597|gb|EFH40021.1| hypothetical protein
           ARALYDRAFT_494776 [Arabidopsis lyrata subsp. lyrata]
          Length = 218

 Score =  186 bits (473), Expect = 3e-45
 Identities = 97/135 (71%), Positives = 114/135 (84%)
 Frame = +2

Query: 119 MIQLLFTVISFEIGLIMILMFKTPLRKLVIMSLDHVKRGRGPVVVKTIGGTVCIVLMSSV 298
           MI LL+TVI  E+ LI++L+FKTPLRKL+I++ D +KRGRGPVVVKTIG TV IVL+SS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGITVFIVLLSSI 60

Query: 299 YSLIKIQKRSSDSSGGVLNSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 478
           YSL+KIQ+RS D  G VLN TDQVL SK LLEASLMGF LFL+LMIDR HHYIRELR+LR
Sbjct: 61  YSLVKIQRRSED--GAVLNPTDQVLASKYLLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query: 479 KSMEDVKKENRAVED 523
           K+ME  KK+NR  ED
Sbjct: 119 KTMETAKKQNRGFED 133


>dbj|BAB09328.1| unnamed protein product [Arabidopsis thaliana]
          Length = 252

 Score =  186 bits (472), Expect = 4e-45
 Identities = 95/135 (70%), Positives = 114/135 (84%)
 Frame = +2

Query: 119 MIQLLFTVISFEIGLIMILMFKTPLRKLVIMSLDHVKRGRGPVVVKTIGGTVCIVLMSSV 298
           MI LL+TVI  E+ LI++L+FKTPLRKL+I++ D +KRGRGPVVVKTIG TV +VL+SS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 299 YSLIKIQKRSSDSSGGVLNSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 478
           YSL+ IQ+RS D  G VLN TDQVL SK+LLEASLMGF LFL+LMIDR HHYIRELR+LR
Sbjct: 61  YSLVNIQRRSED--GAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query: 479 KSMEDVKKENRAVED 523
           K+ME  KK+NR  ED
Sbjct: 119 KTMETAKKQNRGFED 133


>ref|NP_568607.1| B-cell receptor-associated 31-like protein [Arabidopsis thaliana]
           gi|15450826|gb|AAK96684.1| Unknown protein [Arabidopsis
           thaliana] gi|88196723|gb|ABD43004.1| At5g42570
           [Arabidopsis thaliana] gi|332007447|gb|AED94830.1|
           B-cell receptor-associated 31-like protein [Arabidopsis
           thaliana]
          Length = 218

 Score =  186 bits (472), Expect = 4e-45
 Identities = 95/135 (70%), Positives = 114/135 (84%)
 Frame = +2

Query: 119 MIQLLFTVISFEIGLIMILMFKTPLRKLVIMSLDHVKRGRGPVVVKTIGGTVCIVLMSSV 298
           MI LL+TVI  E+ LI++L+FKTPLRKL+I++ D +KRGRGPVVVKTIG TV +VL+SS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 299 YSLIKIQKRSSDSSGGVLNSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 478
           YSL+ IQ+RS D  G VLN TDQVL SK+LLEASLMGF LFL+LMIDR HHYIRELR+LR
Sbjct: 61  YSLVNIQRRSED--GAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query: 479 KSMEDVKKENRAVED 523
           K+ME  KK+NR  ED
Sbjct: 119 KTMETAKKQNRGFED 133


>gb|AAM62748.1| unknown [Arabidopsis thaliana]
          Length = 218

 Score =  186 bits (472), Expect = 4e-45
 Identities = 95/135 (70%), Positives = 114/135 (84%)
 Frame = +2

Query: 119 MIQLLFTVISFEIGLIMILMFKTPLRKLVIMSLDHVKRGRGPVVVKTIGGTVCIVLMSSV 298
           MI LL+TVI  E+ LI++L+FKTPLRKL+I++ D +KRGRGPVVVKTIG TV +VL+SS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 299 YSLIKIQKRSSDSSGGVLNSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 478
           YSL+ IQ+RS D  G VLN TDQVL SK+LLEASLMGF LFL+LMIDR HHYIRELR+LR
Sbjct: 61  YSLVNIQRRSED--GAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query: 479 KSMEDVKKENRAVED 523
           K+ME  KK+NR  ED
Sbjct: 119 KTMETAKKQNRGFED 133


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