BLASTX nr result

ID: Coptis25_contig00012964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012964
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    92   3e-17
emb|CAN68264.1| hypothetical protein VITISV_002761 [Vitis vinifera]    92   3e-17
ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat...    90   2e-16
gb|EEC69300.1| hypothetical protein OsI_38365 [Oryza sativa Indi...    89   3e-16

>ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Vitis
           vinifera] gi|296084015|emb|CBI24403.3| unnamed protein
           product [Vitis vinifera]
          Length = 1116

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/57 (73%), Positives = 46/57 (80%)
 Frame = +1

Query: 1   QLEDGDILCFQKFPTIRSGLECRYPVVPSFLEFVHNRRAVHFRLLTKPNEDDFCLEL 171
           QLEDGDI+CFQK P I SG   RYP VPSFLE+VHNR+ VHFR L KP EDDFCLE+
Sbjct: 764 QLEDGDIICFQKTPPIESGESFRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEM 820


>emb|CAN68264.1| hypothetical protein VITISV_002761 [Vitis vinifera]
          Length = 510

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/57 (73%), Positives = 46/57 (80%)
 Frame = +1

Query: 1   QLEDGDILCFQKFPTIRSGLECRYPVVPSFLEFVHNRRAVHFRLLTKPNEDDFCLEL 171
           QLEDGDI+CFQK P I SG   RYP VPSFLE+VHNR+ VHFR L KP EDDFCLE+
Sbjct: 158 QLEDGDIICFQKTPPIESGESFRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEM 214


>ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|222855251|gb|EEE92798.1|
            predicted protein [Populus trichocarpa]
          Length = 1239

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = +1

Query: 1    QLEDGDILCFQKFPTIRSGLECRYPVVPSFLEFVHNRRAVHFRLLTKPNEDDFCLEL 171
            Q+EDGDI+CFQK P +    ECRYP VPS+LE+VHNR+ VHFR L KP EDDFCLEL
Sbjct: 847  QIEDGDIICFQKSPPLEKEEECRYPDVPSYLEYVHNRQIVHFRSLEKPKEDDFCLEL 903


>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 1120

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/57 (68%), Positives = 46/57 (80%)
 Frame = +1

Query: 1   QLEDGDILCFQKFPTIRSGLECRYPVVPSFLEFVHNRRAVHFRLLTKPNEDDFCLEL 171
           Q+EDGDI+CFQK P +    +C+YP VPSFLE+VHNR+ VHFR L KP EDDFCLEL
Sbjct: 763 QIEDGDIICFQKSPPLEVEEDCKYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEL 819


>gb|EEC69300.1| hypothetical protein OsI_38365 [Oryza sativa Indica Group]
          Length = 1076

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/57 (70%), Positives = 45/57 (78%)
 Frame = +1

Query: 1   QLEDGDILCFQKFPTIRSGLECRYPVVPSFLEFVHNRRAVHFRLLTKPNEDDFCLEL 171
           QLEDGDI+CFQK P +    + RYP VPSFLE+VHNR+ VHFR L KP EDDFCLEL
Sbjct: 757 QLEDGDIICFQKSPVLDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEL 813


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