BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012961
         (2163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulga...   103   1e-19
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    95   7e-17
emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulga...    95   9e-17
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]         94   1e-16
emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulga...    94   2e-16

>emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 488

 Score =  103 bits (258), Expect = 1e-19
 Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 2/243 (0%)
 Frame = -3

Query: 1930 EELQQNMFNLFFKKKAQRVIELDCINGPD-QVNGPLTLVGKLYGGHKLQLEVLSAEVHRI 1754
            +EL ++   L   ++   V++L  +   +      L LVGK+     + L+ L   + +I
Sbjct: 3    DELVESCRRLRIVEEENEVVDLGAVESTNLTAKTSLMLVGKVLSTRAVNLDALKRVMTQI 62

Query: 1753 WQTKYEICLEMVDRDHIQITFEEEKERAHVLENGPWNIHGYILSLKEWRGSHRMEDYNFD 1574
            W     + +  +D +     F   K++A +L+  PW     +L + E  G  +  D   +
Sbjct: 63   WSLNSNMVVRAIDSNSFIFQFFHWKDKAKILDGRPWLFDQKLLVIDEILGDTQPSDVVLE 122

Query: 1573 LVKFWVQIWDLPKVRINQANVRKIGAELGEVCEVDLSCPPDFN-QPVARVKIEMDIKERL 1397
               FWV+I++LP    +   VR I   LG V EVD+    DF  +   RVK+E++I + L
Sbjct: 123  TSPFWVRIYNLPFNCRSDTEVRAIAGGLGPVLEVDID---DFGLERFCRVKVELNIFKPL 179

Query: 1396 TKEQNIKLETGDSLVVRFKYEKLEIFCYFCGIIGHDQYNCRIRAQYRYDISQTGGTAAVI 1217
             + Q I+ + G    + +KYE+L  FC+ CG++GH   +C       ++     G     
Sbjct: 180  RRRQRIRRKDGAVASIDYKYERLPHFCFRCGVLGHGDKDCNAEVPEEWEKEMGWGQWLKA 239

Query: 1216 KPF 1208
             P+
Sbjct: 240  SPY 242


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 95.1 bits (235), Expect = 7e-17
 Identities = 51/185 (27%), Positives = 93/185 (50%)
 Frame = -3

Query: 1825 TLVGKLYGGHKLQLEVLSAEVHRIWQTKYEICLEMVDRDHIQITFEEEKERAHVLENGPW 1646
            +LV       K  L  L  ++ R+W         ++D+  +Q  F+ E+    VL  GPW
Sbjct: 38   SLVVTTVNPRKQNLRALIGQMPRVWGFPDSCVGRIIDKGRVQFKFQSEEAMNLVLRRGPW 97

Query: 1645 NIHGYILSLKEWRGSHRMEDYNFDLVKFWVQIWDLPKVRINQANVRKIGAELGEVCEVDL 1466
            + + ++LS+  W  +  + +    ++ FWVQI  +P + +  A  R +G  LG V +VD 
Sbjct: 98   SFNDWMLSIHRWYPN--LSEAEMKIIPFWVQITGIPLLFLTNAMARCVGNRLGHVADVDF 155

Query: 1465 SCPPDFNQPVARVKIEMDIKERLTKEQNIKLETGDSLVVRFKYEKLEIFCYFCGIIGHDQ 1286
                +    V RV+I  ++ + L  ++N +   G++ V++F++E+L  FC  CG + HD 
Sbjct: 156  DENSNHTGFV-RVRINWNLDDPLRFQRNFQFADGENTVIKFRFERLRNFCTKCGSLKHDI 214

Query: 1285 YNCRI 1271
              C +
Sbjct: 215  KVCTL 219


>emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 94.7 bits (234), Expect = 9e-17
 Identities = 43/191 (22%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
 Frame = -3

Query: 1846 DQVNGPLTLVGKLYGGHKLQLEVLSAEVHRIWQTKYEICLEMVDRDHIQITFEEEKERAH 1667
            D+    L LV ++     +     +  +  IWQ K+++ ++ + ++   + F   +++  
Sbjct: 56   DEARTELGLVIRICTNRHVNQNAFTTTMKNIWQAKHDMDIKNIGKNLYVVQFYHWRDKHR 115

Query: 1666 VLENGPWNIHGYILSLKEWRGSHRMEDYNFDLVKFWVQIWDLP-KVRINQANVRKIGAEL 1490
            V+E  PW+   +++ + + +G+ +  D        W +++DLP K R+N  NV+ IG ++
Sbjct: 116  VMEGQPWHFDKHVILMSDIKGNCKPSDIQLWEFPIWARVYDLPFKGRLNINNVKAIGNKI 175

Query: 1489 GEVCEVDLSCPPDFNQPVARVKIEMDIKERLTKEQNIKLETGDSLVVRFKYEKLEIFCYF 1310
            G    +D S     ++ + R+++  D+++ L+    +++++G+  +   KYE+  +FC++
Sbjct: 176  GSFITMDKSGAMGIDKSI-RIRVMHDVRKPLSSSIKVRMKSGEEDIFTVKYERPPLFCFY 234

Query: 1309 CGIIGHDQYNC 1277
            CG +GH   +C
Sbjct: 235  CGKVGHGTKDC 245


>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
          Length = 2367

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
 Frame = -3

Query: 1873 IELDCINGPDQVNGPLTLVGKLYGGHKLQLEVLSAEVHRIWQTKYEICLEMVDRDHIQIT 1694
            +E++      Q  G  T++ + Y         L  ++ R W+ + E+  + +  +   ++
Sbjct: 341  VEIEIEENEVQKAGQWTILARFYSLKFPNQSALFEDMRRAWRLRAEMSYKSLKDNLFIVS 400

Query: 1693 FEEEKERAHVLENGPWNIHGYILSLKEWRGSHRMEDYNFDLVKFWVQIWDLPKVRINQAN 1514
            F  E +   VL+  PW   G  L + E+ G       N D V  WV+I+DLP V +N+A 
Sbjct: 401  FNAEGDYNFVLQGDPWLHRGDALLVAEFNGLLNPSMVNLDTVPIWVRIYDLPLVMMNRAR 460

Query: 1513 VRKIGAELGEVCEVDLSCPPDFNQPVARVKIEMDIKERLTKEQNIKLET-GDSLVVRF-- 1343
                G+++G+V EVD+           R+++++ +   L +   IK++  G     RF  
Sbjct: 461  GELYGSKMGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLRRMLAIKIKVQGKEETRRFHL 520

Query: 1342 KYEKLEIFCYFCGIIGHDQYNCRIR 1268
            +YE++  FC+FCG IGH    C  R
Sbjct: 521  RYERVPHFCFFCGFIGHSDKECEKR 545


>emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 93.6 bits (231), Expect = 2e-16
 Identities = 49/184 (26%), Positives = 93/184 (50%)
 Frame = -3

Query: 1828 LTLVGKLYGGHKLQLEVLSAEVHRIWQTKYEICLEMVDRDHIQITFEEEKERAHVLENGP 1649
            L+L+GK+        + L   +++IW         +++ D   + F  ++++  V+   P
Sbjct: 38   LSLIGKVVTVRSFNFDALKRTLNQIWSISKGAIFRIIENDLFVVQFACKRDKEKVMAGRP 97

Query: 1648 WNIHGYILSLKEWRGSHRMEDYNFDLVKFWVQIWDLPKVRINQANVRKIGAELGEVCEVD 1469
            W+    ++ L+E     +  +       FWV++++LP    ++ ++R IG  +G+V EVD
Sbjct: 98   WSFDQSLVLLQEIDADVQPSNVRLTHSPFWVRVYNLPMRCRSEQHIRMIGGCIGDVLEVD 157

Query: 1468 LSCPPDFNQPVARVKIEMDIKERLTKEQNIKLETGDSLVVRFKYEKLEIFCYFCGIIGHD 1289
                       AR+++ +DI + L + Q   L+ G S +V  KYE+L  FC+ CG+IGH 
Sbjct: 158  TH--EILWDKSARIRVLIDITKPLRRVQRFALKNGVSALVEIKYERLPTFCFLCGVIGHI 215

Query: 1288 QYNC 1277
              +C
Sbjct: 216  GRDC 219