BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012946
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis ...   174   9e-42
ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like is...   172   3e-41
ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatu...   170   1e-40
ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|NP_001151809.1| 50S ribosomal protein L20 [Zea mays] gi|2269...   170   1e-40

>ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis vinifera]
           gi|147832535|emb|CAN74888.1| hypothetical protein
           VITISV_041868 [Vitis vinifera]
           gi|296087520|emb|CBI34109.3| unnamed protein product
           [Vitis vinifera]
          Length = 125

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/94 (89%), Positives = 89/94 (94%)
 Frame = -3

Query: 495 RVEKALQYSYRDRRTKKRDMRSLWIERINAGSRLHGVNYGNFMHGLMKENIQLNRKVLSE 316
           RVEKALQYSYRDRRTKKRDMRSLWIERINAGSRLHGVNY NF+HGLMKENIQLNRKVLSE
Sbjct: 27  RVEKALQYSYRDRRTKKRDMRSLWIERINAGSRLHGVNYNNFIHGLMKENIQLNRKVLSE 86

Query: 315 LSMHEPYSFKGLVDISRNAFPGNKKVVGIPQKQG 214
           LSMHEPY+FK LVDIS+NAFPGNKK V  P+K+G
Sbjct: 87  LSMHEPYTFKALVDISQNAFPGNKKAVLPPRKEG 120


>ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like isoform 1 [Cucumis
           sativus] gi|449444292|ref|XP_004139909.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449444294|ref|XP_004139910.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
           gi|449444296|ref|XP_004139911.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 4 [Cucumis sativus]
           gi|449475856|ref|XP_004154571.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 1 [Cucumis sativus]
           gi|449475859|ref|XP_004154572.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449475863|ref|XP_004154573.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
          Length = 125

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/92 (89%), Positives = 87/92 (94%)
 Frame = -3

Query: 495 RVEKALQYSYRDRRTKKRDMRSLWIERINAGSRLHGVNYGNFMHGLMKENIQLNRKVLSE 316
           RVEKALQYSYRDRR KKRDMRSLWI+RINAG+RLHGVNYGNFMHGLMKEN+QLNRKVLSE
Sbjct: 27  RVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRLHGVNYGNFMHGLMKENVQLNRKVLSE 86

Query: 315 LSMHEPYSFKGLVDISRNAFPGNKKVVGIPQK 220
           +SMHEPYSFK LVDISRNAFPGNK VV  P+K
Sbjct: 87  ISMHEPYSFKALVDISRNAFPGNKNVVFPPKK 118


>ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatula]
           gi|355518385|gb|AET00009.1| 50S ribosomal protein L20
           [Medicago truncatula] gi|388499506|gb|AFK37819.1|
           unknown [Medicago truncatula]
          Length = 121

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/92 (88%), Positives = 87/92 (94%)
 Frame = -3

Query: 495 RVEKALQYSYRDRRTKKRDMRSLWIERINAGSRLHGVNYGNFMHGLMKENIQLNRKVLSE 316
           RVEKALQYSYRDRR KKRDMRSLWI+RINAG+R+HGVNYGNFMHGL+KENIQLNRKVLSE
Sbjct: 27  RVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRIHGVNYGNFMHGLLKENIQLNRKVLSE 86

Query: 315 LSMHEPYSFKGLVDISRNAFPGNKKVVGIPQK 220
           +SMHEPYSFK LVDISRNAFPGNK VV  P+K
Sbjct: 87  ISMHEPYSFKSLVDISRNAFPGNKNVVVPPRK 118


>ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|222843458|gb|EEE81005.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = -3

Query: 495 RVEKALQYSYRDRRTKKRDMRSLWIERINAGSRLHGVNYGNFMHGLMKENIQLNRKVLSE 316
           RVEKALQYSYRDRR KKRDMRSLWI+RINAG+R HGVNYGNFMHGLMKENIQLNRKVLSE
Sbjct: 27  RVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSE 86

Query: 315 LSMHEPYSFKGLVDISRNAFPGNKKVVGIPQK 220
           +SMHEPYSFK LVDISRNAFPGNK VV  P+K
Sbjct: 87  ISMHEPYSFKALVDISRNAFPGNKNVVHPPRK 118


>ref|NP_001151809.1| 50S ribosomal protein L20 [Zea mays]
           gi|226958655|ref|NP_001152923.1| LOC100280565 [Zea mays]
           gi|242091177|ref|XP_002441421.1| hypothetical protein
           SORBIDRAFT_09g026330 [Sorghum bicolor]
           gi|195605838|gb|ACG24749.1| 50S ribosomal protein L20
           [Zea mays] gi|195649829|gb|ACG44382.1| 50S ribosomal
           protein L20 [Zea mays] gi|241946706|gb|EES19851.1|
           hypothetical protein SORBIDRAFT_09g026330 [Sorghum
           bicolor] gi|413949894|gb|AFW82543.1| 50S ribosomal
           protein L20 isoform 1 [Zea mays]
           gi|413949895|gb|AFW82544.1| 50S ribosomal protein L20
           isoform 2 [Zea mays]
          Length = 122

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/94 (88%), Positives = 87/94 (92%)
 Frame = -3

Query: 495 RVEKALQYSYRDRRTKKRDMRSLWIERINAGSRLHGVNYGNFMHGLMKENIQLNRKVLSE 316
           RVEKALQYSYRDRR KKRDMRSLWIERINAG+RLHGVNYGNFMHGLMKENIQLNRKVLSE
Sbjct: 27  RVEKALQYSYRDRRNKKRDMRSLWIERINAGTRLHGVNYGNFMHGLMKENIQLNRKVLSE 86

Query: 315 LSMHEPYSFKGLVDISRNAFPGNKKVVGIPQKQG 214
           LSMHEPYSFK LVD+SRNAFPGN+ V   P K+G
Sbjct: 87  LSMHEPYSFKALVDVSRNAFPGNRPV---PAKEG 117