BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012944
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis ...    78   6e-13
ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like is...    77   2e-12
ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatu...    76   3e-12
gb|ADR71306.1| 50S ribosomal protein L20 [Hevea brasiliensis]          75   4e-12

>ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis vinifera]
           gi|147832535|emb|CAN74888.1| hypothetical protein
           VITISV_041868 [Vitis vinifera]
           gi|296087520|emb|CBI34109.3| unnamed protein product
           [Vitis vinifera]
          Length = 125

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   NIQLNRKALSELSMHEPYSFKALVDISRNAFPGNKKVVGVPQKQG 135
           NIQLNRK LSELSMHEPY+FKALVDIS+NAFPGNKK V  P+K+G
Sbjct: 76  NIQLNRKVLSELSMHEPYTFKALVDISQNAFPGNKKAVLPPRKEG 120


>ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|222843458|gb|EEE81005.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = +1

Query: 1   NIQLNRKALSELSMHEPYSFKALVDISRNAFPGNKKVVGVPQK 129
           NIQLNRK LSE+SMHEPYSFKALVDISRNAFPGNK VV  P+K
Sbjct: 76  NIQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVHPPRK 118


>ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like isoform 1 [Cucumis
           sativus] gi|449444292|ref|XP_004139909.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449444294|ref|XP_004139910.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
           gi|449444296|ref|XP_004139911.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 4 [Cucumis sativus]
           gi|449475856|ref|XP_004154571.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 1 [Cucumis sativus]
           gi|449475859|ref|XP_004154572.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449475863|ref|XP_004154573.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
          Length = 125

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +1

Query: 1   NIQLNRKALSELSMHEPYSFKALVDISRNAFPGNKKVVGVPQK 129
           N+QLNRK LSE+SMHEPYSFKALVDISRNAFPGNK VV  P+K
Sbjct: 76  NVQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVFPPKK 118


>ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatula]
           gi|355518385|gb|AET00009.1| 50S ribosomal protein L20
           [Medicago truncatula] gi|388499506|gb|AFK37819.1|
           unknown [Medicago truncatula]
          Length = 121

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +1

Query: 1   NIQLNRKALSELSMHEPYSFKALVDISRNAFPGNKKVVGVPQK 129
           NIQLNRK LSE+SMHEPYSFK+LVDISRNAFPGNK VV  P+K
Sbjct: 76  NIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRK 118


>gb|ADR71306.1| 50S ribosomal protein L20 [Hevea brasiliensis]
          Length = 125

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = +1

Query: 1   NIQLNRKALSELSMHEPYSFKALVDISRNAFPGNKKVVGVPQK 129
           NIQLNRK LSELSMHEPYSFKALVDIS NAFPGNK VV  P+K
Sbjct: 76  NIQLNRKVLSELSMHEPYSFKALVDISHNAFPGNKNVVLPPRK 118