BLASTX nr result

ID: Coptis25_contig00012939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012939
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277134.1| PREDICTED: uncharacterized protein LOC100250...   268   2e-69
ref|XP_002267776.1| PREDICTED: uncharacterized protein LOC100266...   261   2e-67
ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|2...   229   1e-57
ref|XP_002310652.1| predicted protein [Populus trichocarpa] gi|2...   224   4e-56
emb|CBI35277.3| unnamed protein product [Vitis vinifera]              219   1e-54

>ref|XP_002277134.1| PREDICTED: uncharacterized protein LOC100250730 [Vitis vinifera]
           gi|297737940|emb|CBI27141.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  268 bits (685), Expect = 2e-69
 Identities = 161/315 (51%), Positives = 198/315 (62%), Gaps = 7/315 (2%)
 Frame = -1

Query: 924 GLKYIEHMVSKMDTLAGVAIKYGVEVADIKRMNGLVSDLQMFALKSLQIPLPGRHPPSPV 745
           G+  IEH VSKMDTLAG+AIKYGVEVADIKRMNGLV+DLQMFAL++LQIPLPGRHPPSP 
Sbjct: 64  GVGSIEHQVSKMDTLAGIAIKYGVEVADIKRMNGLVTDLQMFALRTLQIPLPGRHPPSPC 123

Query: 744 LSNGSATPGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEQTQSRSACS 565
           L N S TP +                                      +++ T + S   
Sbjct: 124 LLNSSETPQR--------------------------------------NSDWTPTDSVHR 145

Query: 564 DILESLQSLKFESP-QRKVSPAMSSLQGYYRLKPQNNKHTEKETEMAVYSTVRAHYLEDG 388
           ++ E+ QSL+ +S  QR VSPAMS+LQGYYRLKP++ ++  K  EMAVY    AHYLEDG
Sbjct: 146 NLFETFQSLRVKSSSQRPVSPAMSTLQGYYRLKPEDQRNAPKGFEMAVYRKESAHYLEDG 205

Query: 387 PFSERSIRSEPPPNRHRKSRSLVNDILSEGGLDEDVPVVGGVGNGESEKLKKSVRRRQKA 208
           PFS++S  S P  +R RK RSL N  + E G   D   +     G+    +K +RRRQK+
Sbjct: 206 PFSKQSSISNPLLSRVRKCRSLANGFMPENGEAADDMTILEAKEGDYRWNEKLIRRRQKS 265

Query: 207 DTDIGSHTLNMPLMEDN---GGGSGFSSITGKGLALRPKSSSRIALAADA---DAVPVGL 46
           +TD  S +  MPL EDN   GGG GFS+ITGKGLALR K+ +R A  ADA   + +PVGL
Sbjct: 266 ETDF-SCSPEMPLKEDNRSGGGGGGFSAITGKGLALRTKAVNRTATDADASLMNPIPVGL 324

Query: 45  GDSVVTSLFDGVRKS 1
           GDS+VT  F GVRKS
Sbjct: 325 GDSIVTDSFAGVRKS 339


>ref|XP_002267776.1| PREDICTED: uncharacterized protein LOC100266699 [Vitis vinifera]
          Length = 366

 Score =  261 bits (668), Expect = 2e-67
 Identities = 160/318 (50%), Positives = 197/318 (61%), Gaps = 9/318 (2%)
 Frame = -1

Query: 927 NGLKYIEHMVSKMDTLAGVAIKYGVEVADIKRMNGLVSDLQMFALKSLQIPLPGRHPPSP 748
           NG+ YI H VSKMDTLAGVAIKYGVEVADIKRMNGL +DLQMFALKSLQIPLPGRHPPSP
Sbjct: 32  NGVNYILHTVSKMDTLAGVAIKYGVEVADIKRMNGLATDLQMFALKSLQIPLPGRHPPSP 91

Query: 747 VLSNGSATPGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEQTQSRSAC 568
           VLSN S + G+                                      S E+T    + 
Sbjct: 92  VLSNASTSSGER-------------------------------------STEETPLHLSH 114

Query: 567 SDILESLQSLKFESPQRKVSPAMSSLQGYYRLKPQ--NNKHTEKETEMAVYSTVRAHYLE 394
           S++LESLQSL  ++PQ+KVSPAMS+LQ YY LK Q  N     +  EM VY   + H  +
Sbjct: 115 SNVLESLQSLGLKTPQKKVSPAMSTLQNYYGLKSQDKNQNGGAEGMEMTVYGAGKPHGFD 174

Query: 393 DGPFSERSIRSEPPPNRHRKSRSLVNDILSEGG-LDEDVPVVGGVGNGESEKL-KKSVRR 220
            G   +    SEP  N+  KSR+L N   +E G +  DVP+    G+GE E+  +KSVRR
Sbjct: 175 FGLLPKALPISEPSSNQDHKSRNLANGFFAENGTVAADVPI-SEAGDGEGERSNEKSVRR 233

Query: 219 RQKADTDIGSHTLNMPLMEDNGGGSGFSSITGKGLALRPKSSSRIALAADAD-----AVP 55
           RQK++ D G+    +   E++GG SGFS+ITGKGLALRPKS+SR AL+ADA+     A+P
Sbjct: 234 RQKSEADSGAGPERLLKEENSGGSSGFSAITGKGLALRPKSASRTALSADAESSWLNAIP 293

Query: 54  VGLGDSVVTSLFDGVRKS 1
           VGLGDS++      VRKS
Sbjct: 294 VGLGDSIMPEGLTSVRKS 311


>ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|222856619|gb|EEE94166.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  229 bits (583), Expect = 1e-57
 Identities = 150/315 (47%), Positives = 182/315 (57%), Gaps = 6/315 (1%)
 Frame = -1

Query: 927 NGLKYIEHMVSKMDTLAGVAIKYGVEVADIKRMNGLVSDLQMFALKSLQIPLPGRHPPSP 748
           +G+ +IEH VSK+DTLAGVAIKYGVEVADIK+MN LV+DLQMFALKSLQIPLPGRH PS 
Sbjct: 10  SGVGFIEHPVSKLDTLAGVAIKYGVEVADIKKMNSLVTDLQMFALKSLQIPLPGRHQPSS 69

Query: 747 VLSNGSATPGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEQTQSRSAC 568
            LSNGS  PG                                       S E+T  R   
Sbjct: 70  FLSNGSDVPG-------------------------------------YNSYERTPPRGLQ 92

Query: 567 SDILESLQSLKFESPQRKVSPAMSSLQGYYRLKPQNNKHTEKETEMAVYSTVRAHYLEDG 388
           SD+ +S QSLK +S + KVSPAMSSLQGYY LKP++ K   +  EMAVY    +H+ E G
Sbjct: 93  SDLFDSFQSLKPKSSRCKVSPAMSSLQGYYGLKPKDQKKIPEGFEMAVYRNGHSHHPEGG 152

Query: 387 PFSERSIRSEPPPNRHRKSRSLVNDILSEGGLDEDVPVVGGVGNGESEKLKKSVRRRQKA 208
           P+ + S  S PP + HRK++SL N  L E     D   +  V  GESEKL   VRRRQK+
Sbjct: 153 PYLKPSPASHPPLSLHRKTKSLANGFLDEKNGLVDKLYLDEVKEGESEKL---VRRRQKS 209

Query: 207 DTDIGSHTLNMPLMEDNGGGSGFSSITGKGLALRPKSSSRIALAADA---DAVPVGLGDS 37
           + D  S   ++ L+ +   G  FS+ITGKGLALRPK+ +R     DA    +   G GD 
Sbjct: 210 EADFTSIYTDL-LIREESTGPAFSTITGKGLALRPKAGNRTTTDVDAGGLTSAQTGPGD- 267

Query: 36  VVTSLFDG---VRKS 1
               L DG   VRKS
Sbjct: 268 ----LADGFLVVRKS 278


>ref|XP_002310652.1| predicted protein [Populus trichocarpa] gi|222853555|gb|EEE91102.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score =  224 bits (570), Expect = 4e-56
 Identities = 147/309 (47%), Positives = 178/309 (57%), Gaps = 1/309 (0%)
 Frame = -1

Query: 924 GLKYIEHMVSKMDTLAGVAIKYGVEVADIKRMNGLVSDLQMFALKSLQIPLPGRHPPSPV 745
           G  +IEH VSK+DTLAGVAIKYGVEVADIK+MNGLV+DLQMFALKSLQIPLPGRHPPS  
Sbjct: 88  GSGFIEHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDLQMFALKSLQIPLPGRHPPSLF 147

Query: 744 LSNGSATPGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEQTQSRSACS 565
           LSNG  TP                                        S EQT  R   S
Sbjct: 148 LSNGFDTP---------------------------------------RSYEQTPPRGLQS 168

Query: 564 DILESLQSLKFESPQRKVSPAMSSLQGYYRLKPQNNKHTEKETEMAVYSTVRAHYLEDGP 385
           D+ +S Q L  +S Q KVSPAMSSLQGYY LKP++ K+T K  EMAV     +H+LE G 
Sbjct: 169 DVFDSFQYLNPKSSQLKVSPAMSSLQGYYGLKPKDQKNTSKGFEMAVNRNGYSHHLEGGL 228

Query: 384 FSERSIRSEPPPNRHRKSRSLVNDILSEGGLDEDVPVVGGVGNGESEKLKKSVRRRQKAD 205
           + + S  S PP   HRK+RS VN++L E     +   +      ESEKL   VRRRQK++
Sbjct: 229 YLKPSPASHPPLCLHRKTRSWVNELLDENNELVNKLFLDDAKEIESEKL---VRRRQKSE 285

Query: 204 TDIGSHTLNMPLMEDNGGGSGFSSITGKGLALRPKSSSRIALAAD-ADAVPVGLGDSVVT 28
           TD  S   ++ + E+N  G+ FS+ITGK LALRPK+ +R     + A  +    G   V 
Sbjct: 286 TDFTSIDSDLLIREEN-SGAAFSTITGKCLALRPKAGNRATKNVEAAGLISAQSGPRDVA 344

Query: 27  SLFDGVRKS 1
             F  VRKS
Sbjct: 345 DGFPMVRKS 353


>emb|CBI35277.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  219 bits (558), Expect = 1e-54
 Identities = 141/315 (44%), Positives = 170/315 (53%), Gaps = 6/315 (1%)
 Frame = -1

Query: 927 NGLKYIEHMVSKMDTLAGVAIKYGVEVADIKRMNGLVSDLQMFALKSLQIPLPGRHPPSP 748
           NG+ YI H VSKMDTLAGVAIKYGVEVADIKRMNGL +DLQMFALKSLQIPLPGRHPPSP
Sbjct: 19  NGVNYILHTVSKMDTLAGVAIKYGVEVADIKRMNGLATDLQMFALKSLQIPLPGRHPPSP 78

Query: 747 VLSNGSATPGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEQTQSRSAC 568
           VLSN S + G+                                      S E+T    + 
Sbjct: 79  VLSNASTSSGE-------------------------------------RSTEETPLHLSH 101

Query: 567 SDILESLQSLKFESPQRKVSPAMSSLQGYYRLKPQNNKHTEKETEMAVYSTVRAHYLEDG 388
           S++LESLQSL  ++PQ+KVSPAMS+LQ YY LK Q+                        
Sbjct: 102 SNVLESLQSLGLKTPQKKVSPAMSTLQNYYGLKSQDKNQNG------------------- 142

Query: 387 PFSERSIRSEPPPNRHRKSRSLVNDILSEGG-LDEDVPVVGGVGNGESEKLKKSVRRRQK 211
                 +   P  N+  KSR+L N   +E G +  DVP +   G+GE E+          
Sbjct: 143 --GAEGMEMTPSSNQDHKSRNLANGFFAENGTVAADVP-ISEAGDGEGER---------- 189

Query: 210 ADTDIGSHTLNMPLMEDNGGGSGFSSITGKGLALRPKSSSRIALAADAD-----AVPVGL 46
                           +NGG SGFS+ITGKGLALRPKS+SR AL+ADA+     A+PVGL
Sbjct: 190 --------------SNENGGSSGFSAITGKGLALRPKSASRTALSADAESSWLNAIPVGL 235

Query: 45  GDSVVTSLFDGVRKS 1
           GDS++      VRKS
Sbjct: 236 GDSIMPEGLTSVRKS 250


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