BLASTX nr result

ID: Coptis25_contig00012921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012921
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141363.1| PREDICTED: probable ubiquitin-conjugating en...    67   3e-09
ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating en...    66   4e-09
emb|CBI21855.3| unnamed protein product [Vitis vinifera]               66   4e-09
emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]    66   4e-09
ref|XP_004160617.1| PREDICTED: probable ubiquitin-conjugating en...    66   6e-09

>ref|XP_004141363.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like
           [Cucumis sativus]
          Length = 646

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/87 (43%), Positives = 51/87 (58%)
 Frame = +3

Query: 3   HFEYFVGGHFRLRAQTILEACKEYIKGTEVGGLIEHEGEVQEGELQEITYDNIGSKNFRR 182
           HFE FV GHF  RA  IL ACK YI G +VG L+  EG VQ+ EL     D   S +F++
Sbjct: 547 HFEDFVRGHFYQRAHDILVACKAYINGAQVGSLV--EGGVQDLELS----DKSCSDSFKQ 600

Query: 183 SLGIVVGNLIPALLKNGAKDCEKYIPL 263
           S+  ++  L+ A    G  DC+KY+ +
Sbjct: 601 SVTHLLSQLVAAFKGIGVSDCDKYLQM 627


>ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 26-like [Vitis
           vinifera]
          Length = 511

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = +3

Query: 3   HFEYFVGGHFRLRAQTILEACKEYIKGTEVGGLIEHEGEVQEGELQEITYDNIGSKNFRR 182
           HFE FV GHFR RA  IL ACK Y +G++VG +      V+EG      ++   S  F+ 
Sbjct: 430 HFEDFVVGHFRQRAHDILVACKAYKEGSQVGSM------VKEGTQDVNEHEMSTSHEFKE 483

Query: 183 SLGIVVGNLIPALLKNGAKDCEKY 254
           ++G ++  L+   +KNG+KDCE++
Sbjct: 484 AVGKMMKTLVTNFIKNGSKDCEQF 507


>emb|CBI21855.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = +3

Query: 3   HFEYFVGGHFRLRAQTILEACKEYIKGTEVGGLIEHEGEVQEGELQEITYDNIGSKNFRR 182
           HFE FV GHFR RA  IL ACK Y +G++VG +      V+EG      ++   S  F+ 
Sbjct: 391 HFEDFVVGHFRQRAHDILVACKAYKEGSQVGSM------VKEGTQDVNEHEMSTSHEFKE 444

Query: 183 SLGIVVGNLIPALLKNGAKDCEKY 254
           ++G ++  L+   +KNG+KDCE++
Sbjct: 445 AVGKMMKTLVTNFIKNGSKDCEQF 468


>emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]
          Length = 532

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = +3

Query: 3   HFEYFVGGHFRLRAQTILEACKEYIKGTEVGGLIEHEGEVQEGELQEITYDNIGSKNFRR 182
           HFE FV GHFR RA  IL ACK Y +G++VG +      V+EG      ++   S  F+ 
Sbjct: 451 HFEDFVVGHFRQRAHDILVACKAYKEGSQVGSM------VKEGTQDVNEHEMSTSHEFKE 504

Query: 183 SLGIVVGNLIPALLKNGAKDCEKY 254
           ++G ++  L+   +KNG+KDCE++
Sbjct: 505 AVGKMMKTLVTNFIKNGSKDCEQF 528


>ref|XP_004160617.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like
           [Cucumis sativus]
          Length = 615

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/87 (43%), Positives = 51/87 (58%)
 Frame = +3

Query: 3   HFEYFVGGHFRLRAQTILEACKEYIKGTEVGGLIEHEGEVQEGELQEITYDNIGSKNFRR 182
           HFE FV GHF  RA  IL ACK YI G +VG L+  EG VQ+ EL     D   S +F++
Sbjct: 516 HFEDFVRGHFYQRAHDILVACKAYINGAQVGSLV--EGGVQDLELS----DKSCSDSFKQ 569

Query: 183 SLGIVVGNLIPALLKNGAKDCEKYIPL 263
           S+  ++  L+ A    G  DC+KY+ +
Sbjct: 570 SVTHLLSQLVAAFKGIGVGDCDKYLQM 596


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