BLASTX nr result

ID: Coptis25_contig00012916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012916
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50828.1|AC074395_2 clathrin heavy chain, putative [Arabido...   202   7e-50
gb|AAF01510.1|AC009991_6 putative clathrin heavy chain [Arabidop...   202   7e-50
gb|AAG51341.1|AC012562_2 putative clathrin heavy chain, 3' parti...   202   7e-50
ref|NP_187466.4| Clathrin, heavy chain [Arabidopsis thaliana] gi...   202   7e-50
ref|NP_187724.2| Clathrin, heavy chain [Arabidopsis thaliana] gi...   202   7e-50

>gb|AAG50828.1|AC074395_2 clathrin heavy chain, putative [Arabidopsis thaliana]
          Length = 1516

 Score =  202 bits (515), Expect = 7e-50
 Identities = 100/125 (80%), Positives = 111/125 (88%)
 Frame = +1

Query: 526 GKLAFTKKQADLLFPPYITDDFPVAIQISHKYGLIYVIMKLGLLCLCDLETATTVYRNRN 705
           GK +FTKKQADL FPP   DDFPVA+Q+SHK+ LIYVI KLGLL + DLETA+ +YRNR 
Sbjct: 62  GKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDLETASAIYRNRI 121

Query: 706 SPDPIILTSEASSVGGFYAVNRRGQVLLATVNEATIVPFVIGQLNNLELAVNLAKRGNLA 885
           SPDPI LTSEASSVGGFYA+NRRGQVLLATVNEATI+PF+ GQLNNLELAVNLAKRGNL 
Sbjct: 122 SPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLELAVNLAKRGNLP 181

Query: 886 GAENI 900
           GAEN+
Sbjct: 182 GAENL 186


>gb|AAF01510.1|AC009991_6 putative clathrin heavy chain [Arabidopsis thaliana]
           gi|12321871|gb|AAG50967.1|AC073395_9 clathrin heavy
           chain, putative; 28833-19741 [Arabidopsis thaliana]
          Length = 1705

 Score =  202 bits (515), Expect = 7e-50
 Identities = 100/125 (80%), Positives = 111/125 (88%)
 Frame = +1

Query: 526 GKLAFTKKQADLLFPPYITDDFPVAIQISHKYGLIYVIMKLGLLCLCDLETATTVYRNRN 705
           GK +FTKKQADL FPP   DDFPVA+Q+SHK+ LIYVI KLGLL + DLETA+ +YRNR 
Sbjct: 252 GKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDLETASAIYRNRI 311

Query: 706 SPDPIILTSEASSVGGFYAVNRRGQVLLATVNEATIVPFVIGQLNNLELAVNLAKRGNLA 885
           SPDPI LTSEASSVGGFYA+NRRGQVLLATVNEATI+PF+ GQLNNLELAVNLAKRGNL 
Sbjct: 312 SPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLELAVNLAKRGNLP 371

Query: 886 GAENI 900
           GAEN+
Sbjct: 372 GAENL 376


>gb|AAG51341.1|AC012562_2 putative clathrin heavy chain, 3' partial; 6334-1 [Arabidopsis
           thaliana]
          Length = 1280

 Score =  202 bits (515), Expect = 7e-50
 Identities = 100/125 (80%), Positives = 111/125 (88%)
 Frame = +1

Query: 526 GKLAFTKKQADLLFPPYITDDFPVAIQISHKYGLIYVIMKLGLLCLCDLETATTVYRNRN 705
           GK +FTKKQADL FPP   DDFPVA+Q+SHK+ LIYVI KLGLL + DLETA+ +YRNR 
Sbjct: 252 GKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDLETASAIYRNRI 311

Query: 706 SPDPIILTSEASSVGGFYAVNRRGQVLLATVNEATIVPFVIGQLNNLELAVNLAKRGNLA 885
           SPDPI LTSEASSVGGFYA+NRRGQVLLATVNEATI+PF+ GQLNNLELAVNLAKRGNL 
Sbjct: 312 SPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLELAVNLAKRGNLP 371

Query: 886 GAENI 900
           GAEN+
Sbjct: 372 GAENL 376


>ref|NP_187466.4| Clathrin, heavy chain [Arabidopsis thaliana]
           gi|122223626|sp|Q0WLB5.1|CLAH2_ARATH RecName:
           Full=Clathrin heavy chain 2 gi|110740394|dbj|BAF02092.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332641123|gb|AEE74644.1| Clathrin, heavy chain
           [Arabidopsis thaliana]
          Length = 1703

 Score =  202 bits (515), Expect = 7e-50
 Identities = 100/125 (80%), Positives = 111/125 (88%)
 Frame = +1

Query: 526 GKLAFTKKQADLLFPPYITDDFPVAIQISHKYGLIYVIMKLGLLCLCDLETATTVYRNRN 705
           GK +FTKKQADL FPP   DDFPVA+Q+SHK+ LIYVI KLGLL + DLETA+ +YRNR 
Sbjct: 252 GKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDLETASAIYRNRI 311

Query: 706 SPDPIILTSEASSVGGFYAVNRRGQVLLATVNEATIVPFVIGQLNNLELAVNLAKRGNLA 885
           SPDPI LTSEASSVGGFYA+NRRGQVLLATVNEATI+PF+ GQLNNLELAVNLAKRGNL 
Sbjct: 312 SPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLELAVNLAKRGNLP 371

Query: 886 GAENI 900
           GAEN+
Sbjct: 372 GAENL 376


>ref|NP_187724.2| Clathrin, heavy chain [Arabidopsis thaliana]
           gi|122223702|sp|Q0WNJ6.1|CLAH1_ARATH RecName:
           Full=Clathrin heavy chain 1 gi|110738758|dbj|BAF01303.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332641484|gb|AEE75005.1| Clathrin, heavy chain
           [Arabidopsis thaliana]
          Length = 1705

 Score =  202 bits (515), Expect = 7e-50
 Identities = 100/125 (80%), Positives = 111/125 (88%)
 Frame = +1

Query: 526 GKLAFTKKQADLLFPPYITDDFPVAIQISHKYGLIYVIMKLGLLCLCDLETATTVYRNRN 705
           GK +FTKKQADL FPP   DDFPVA+Q+SHK+ LIYVI KLGLL + DLETA+ +YRNR 
Sbjct: 252 GKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDLETASAIYRNRI 311

Query: 706 SPDPIILTSEASSVGGFYAVNRRGQVLLATVNEATIVPFVIGQLNNLELAVNLAKRGNLA 885
           SPDPI LTSEASSVGGFYA+NRRGQVLLATVNEATI+PF+ GQLNNLELAVNLAKRGNL 
Sbjct: 312 SPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLELAVNLAKRGNLP 371

Query: 886 GAENI 900
           GAEN+
Sbjct: 372 GAENL 376


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