BLASTX nr result

ID: Coptis25_contig00012904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012904
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303036.1| predicted protein [Populus trichocarpa] gi|2...   153   7e-35
ref|NP_566755.1| BSD domain-containing protein [Arabidopsis thal...   147   3e-33
ref|NP_001240156.1| uncharacterized protein LOC100805729 [Glycin...   146   9e-33
ref|XP_004144378.1| PREDICTED: uncharacterized protein LOC101211...   145   2e-32
ref|XP_002885675.1| BSD domain-containing protein [Arabidopsis l...   145   2e-32

>ref|XP_002303036.1| predicted protein [Populus trichocarpa] gi|222844762|gb|EEE82309.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  153 bits (386), Expect = 7e-35
 Identities = 76/143 (53%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = -2

Query: 883 EEEEVGITEQLQNFIKSFTLETFKNYSLQDGQKTSTSNGDIVNSSDNNQQDLSEWQEGHA 704
           EEE++G+T+QL + +KSFT++TFKN+ LQD    S++      +S N Q+DLSEWQE HA
Sbjct: 37  EEEQLGVTQQLIDHVKSFTIDTFKNFPLQDEATPSSTK-----TSSNVQRDLSEWQERHA 91

Query: 703 TLILSKVKEISQLRYVLCPRHLKEREFWRIYFALVKNYVTPYEIRAIQKAKVRRIGKEDE 524
           TL+LSK KE+S LR++LCPRHLKER+FW IYF LVK++V  YE+ AI+ AK++ +  E+E
Sbjct: 92  TLVLSKAKELSHLRFMLCPRHLKERQFWMIYFMLVKSHVAEYELHAIRLAKLKMMAIENE 151

Query: 523 KMVAS-AYEVEMAETKGAMAVSP 458
           +   +  +EVEMAETK +  ++P
Sbjct: 152 ESSDTIGFEVEMAETKQSANLAP 174


>ref|NP_566755.1| BSD domain-containing protein [Arabidopsis thaliana]
           gi|11994664|dbj|BAB02892.1| unnamed protein product
           [Arabidopsis thaliana] gi|21592853|gb|AAM64803.1|
           unknown [Arabidopsis thaliana]
           gi|98960949|gb|ABF58958.1| At3g24820 [Arabidopsis
           thaliana] gi|332643429|gb|AEE76950.1| BSD
           domain-containing protein [Arabidopsis thaliana]
          Length = 186

 Score =  147 bits (372), Expect = 3e-33
 Identities = 79/154 (51%), Positives = 111/154 (72%), Gaps = 9/154 (5%)
 Frame = -2

Query: 889 KEE--EEEVGITEQLQNFIKSFTLETFKNYSLQDGQKTSTSN--GDIVN---SSDNNQQD 731
           KEE  +E +G+T++L + ++SFT++TFKN+SL+D ++  + N  GD  N   SS N ++D
Sbjct: 31  KEEGKDEILGVTDELIDHVRSFTIDTFKNFSLEDEEEEVSVNPLGDEDNGMSSSANVKKD 90

Query: 730 LSEWQEGHATLILSKVKEISQLRYVLCPRHLKEREFWRIYFALVKNYVTPYEIRAIQKAK 551
           LS+WQE HA L+LSK KE+SQLR+ LCPR LKE +FWRIYF LV+  V  YE+ AIQ+A+
Sbjct: 91  LSDWQEKHAVLVLSKSKELSQLRFKLCPRVLKEHQFWRIYFQLVRKIVAKYEVLAIQQAQ 150

Query: 550 VRRIGKEDEKMVAS--AYEVEMAETKGAMAVSPS 455
           +RR+  ED K   S   YEVEM+ETK  ++  P+
Sbjct: 151 IRRMAMEDSKTSESKGVYEVEMSETKQRLSTGPA 184


>ref|NP_001240156.1| uncharacterized protein LOC100805729 [Glycine max]
           gi|255645390|gb|ACU23191.1| unknown [Glycine max]
          Length = 178

 Score =  146 bits (368), Expect = 9e-33
 Identities = 76/143 (53%), Positives = 101/143 (70%), Gaps = 1/143 (0%)
 Frame = -2

Query: 883 EEEEVGITEQLQNFIKSFTLETFKNYSLQDGQKTSTSNGDIVNSSDNNQQDLSEWQEGHA 704
           EE   GITE+L N IK+FTL+TFKN+ LQD  + S    D  +SS   + +LS+WQE HA
Sbjct: 33  EESIYGITEELINHIKTFTLDTFKNFPLQDEVEGSYGE-DTQSSSTKVRNELSQWQEKHA 91

Query: 703 TLILSKVKEISQLRYVLCPRHLKEREFWRIYFALVKNYVTPYEIRAIQKAKVRRIGKEDE 524
            L+LS+VKE+SQLRYVLCPRHLKE +FW+IYF L +++V  YE+R IQ+ K++++  EDE
Sbjct: 92  ILVLSRVKEMSQLRYVLCPRHLKESQFWKIYFKLARSHVLEYELRDIQREKLKQMAVEDE 151

Query: 523 KMV-ASAYEVEMAETKGAMAVSP 458
           K    + YEVEMAE      + P
Sbjct: 152 KSSDNNPYEVEMAEANHENFIEP 174


>ref|XP_004144378.1| PREDICTED: uncharacterized protein LOC101211516 [Cucumis sativus]
          Length = 170

 Score =  145 bits (366), Expect = 2e-32
 Identities = 81/177 (45%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
 Frame = -2

Query: 988 MDFSSWFRKTLLKNHIXXXXXXXXXXXXXXXQNKEEEEEVGITEQLQNFIKSFTLETFKN 809
           M  SSWFR+ LL+ +                 +++EE+ +G+T++L  F+KSFT +TFKN
Sbjct: 1   MSLSSWFRRRLLREN---GQFTRASIPLQQSHHEKEEQFLGVTDRLIEFVKSFTFDTFKN 57

Query: 808 YSLQDGQKTSTSNGDIVNSSDNNQQDLSEWQEGHATLILSKVKEISQLRYVLCPRHLKER 629
           + L D        G+  +  +N    LS+WQE HA L+LSKVKEISQLRY LCP HLKE+
Sbjct: 58  FPLLD-------EGEAAHGDEN----LSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEQ 106

Query: 628 EFWRIYFALVKNYVTPYEIRAIQKAKVRRIGKEDEKMVASA-YEVEMAETKGAMAVS 461
           +FW+IYFALVK+ V  YE+RAIQ  K++R+   +E+   +  YEVEM+ET  A  V+
Sbjct: 107 QFWKIYFALVKSLVFEYELRAIQLDKLKRMALRNEQPSNNTPYEVEMSETNTACHVT 163


>ref|XP_002885675.1| BSD domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331515|gb|EFH61934.1| BSD domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 186

 Score =  145 bits (365), Expect = 2e-32
 Identities = 79/154 (51%), Positives = 111/154 (72%), Gaps = 9/154 (5%)
 Frame = -2

Query: 889 KEE--EEEVGITEQLQNFIKSFTLETFKNYSLQDGQK-TSTSN-GDIVN---SSDNNQQD 731
           KEE  +E +G+T++L + ++SFT++TFKN+SL+D ++  S S+ GD  N   SS N ++D
Sbjct: 31  KEEGKDEILGVTDELIDHVRSFTIDTFKNFSLEDEEEEVSVSHLGDDDNGMSSSVNVKKD 90

Query: 730 LSEWQEGHATLILSKVKEISQLRYVLCPRHLKEREFWRIYFALVKNYVTPYEIRAIQKAK 551
           LS+WQE HA L+LSK KE+SQLR+ LCPR LKE +FWRIYF LV+  V  YE+ AIQ+AK
Sbjct: 91  LSDWQEKHAVLVLSKSKELSQLRFKLCPRVLKEHQFWRIYFQLVRKLVAKYEVLAIQQAK 150

Query: 550 VRRIGKEDEKM--VASAYEVEMAETKGAMAVSPS 455
           +RR+  ED K       YEVEM++TK  ++  P+
Sbjct: 151 IRRMAMEDSKTSETKGVYEVEMSKTKQRLSTGPA 184


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