BLASTX nr result

ID: Coptis25_contig00012891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012891
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303866.1| AP2 domain-containing transcription factor [...   113   2e-23
ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive tran...   110   9e-23
ref|XP_002512756.1| conserved hypothetical protein [Ricinus comm...   109   2e-22
ref|XP_002272159.1| PREDICTED: AP2-like ethylene-responsive tran...   108   4e-22
emb|CAN69612.1| hypothetical protein VITISV_038859 [Vitis vinifera]   108   4e-22

>ref|XP_002303866.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222841298|gb|EEE78845.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 275

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 2/73 (2%)
 Frame = +2

Query: 80  STKFKEMLEKTSAADCPLTPLESDL--PRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLN 253
           S+KFKEMLE+TSA+DCPLTP ESD   PR +FP+DIQTYF+CQDS SY  GDD++FGDL+
Sbjct: 203 SSKFKEMLERTSASDCPLTPPESDRDPPRRSFPDDIQTYFDCQDSSSYTDGDDIIFGDLH 262

Query: 254 SFSSEMFQCELDG 292
           SF+S +F CELDG
Sbjct: 263 SFASPIFHCELDG 275


>ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060 [Vitis vinifera]
          Length = 347

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/93 (59%), Positives = 66/93 (70%)
 Frame = +2

Query: 5   SEPAVAQPRPXXXXXXXXXXXXXXQSTKFKEMLEKTSAADCPLTPLESDLPRCTFPEDIQ 184
           SEP + Q RP              QS+KFKEM+E T+AAD   TP ES+LPRC+FP+DIQ
Sbjct: 255 SEPPLTQTRPPIASSALGLLL---QSSKFKEMMEMTTAADHLSTPPESELPRCSFPDDIQ 311

Query: 185 TYFECQDSGSYAQGDDVMFGDLNSFSSEMFQCE 283
           TYFECQDSGSY +GDDV+F +LNSF   MFQC+
Sbjct: 312 TYFECQDSGSYEEGDDVIFSELNSFIPPMFQCD 344


>ref|XP_002512756.1| conserved hypothetical protein [Ricinus communis]
           gi|223547767|gb|EEF49259.1| conserved hypothetical
           protein [Ricinus communis] gi|441477735|dbj|BAM75180.1|
           AP2-type transcription factor [Ricinus communis]
          Length = 330

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/71 (64%), Positives = 64/71 (90%)
 Frame = +2

Query: 77  QSTKFKEMLEKTSAADCPLTPLESDLPRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLNS 256
           QSTKFKEMLE+TSA DCP+TP ES+ PR +FP+DIQT+F+CQD+GS+ +GDD++FG+L++
Sbjct: 259 QSTKFKEMLERTSANDCPMTPPESEPPRRSFPDDIQTFFDCQDTGSFTEGDDIIFGELDA 318

Query: 257 FSSEMFQCELD 289
           F+S +F CEL+
Sbjct: 319 FASPIFHCELN 329


>ref|XP_002272159.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060-like [Vitis vinifera]
          Length = 361

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/72 (66%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +2

Query: 77  QSTKFKEMLEKTSAADCPLTPLES-DLPRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLN 253
           QS+KFKEMLE+TS ADCPLTP +  ++PR +FP+DIQTYF+CQ++ SY + DD++FGDL 
Sbjct: 289 QSSKFKEMLERTSTADCPLTPPDQIEMPRSSFPDDIQTYFDCQETNSYGESDDIIFGDLK 348

Query: 254 SFSSEMFQCELD 289
            FSS MFQCELD
Sbjct: 349 YFSSPMFQCELD 360


>emb|CAN69612.1| hypothetical protein VITISV_038859 [Vitis vinifera]
          Length = 338

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/72 (66%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +2

Query: 77  QSTKFKEMLEKTSAADCPLTPLES-DLPRCTFPEDIQTYFECQDSGSYAQGDDVMFGDLN 253
           QS+KFKEMLE+TS ADCPLTP +  ++PR +FP+DIQTYF+CQ++ SY + DD++FGDL 
Sbjct: 266 QSSKFKEMLERTSTADCPLTPPDQIEMPRSSFPDDIQTYFDCQETNSYGESDDIIFGDLK 325

Query: 254 SFSSEMFQCELD 289
            FSS MFQCELD
Sbjct: 326 YFSSPMFQCELD 337


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