BLASTX nr result
ID: Coptis25_contig00012886
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00012886 (483 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc... 194 5e-48 emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera] 194 5e-48 sp|O24164.1|PPOM_TOBAC RecName: Full=Protoporphyrinogen oxidase,... 183 1e-44 emb|CAA12401.1| protoporphyrinogen oxidase [Solanum tuberosum] 178 5e-43 pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix O... 176 2e-42 >ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis vinifera] gi|296090240|emb|CBI40059.3| unnamed protein product [Vitis vinifera] Length = 508 Score = 194 bits (494), Expect = 5e-48 Identities = 97/139 (69%), Positives = 114/139 (82%), Gaps = 1/139 (0%) Frame = +3 Query: 63 SSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKVLSLSCSLDENSLFDNWSISY 239 SS KK QRG FSF GGMQ+L + LCKELG D +L SKVLSLS S E S +NWS++Y Sbjct: 229 SSEKKKRQRGSFSFQGGMQTLTDTLCKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAY 288 Query: 240 APNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLDFLPEVNYMPLSVVITTYKKE 419 A N K S D SFDAVIMTAPLCNV+EMKI+++G PF+LDFLPEV+Y+PLSV+ITT+KKE Sbjct: 289 ASNPGKQSKDLSFDAVIMTAPLCNVREMKIMKKGNPFLLDFLPEVSYLPLSVIITTFKKE 348 Query: 420 NVRRPLEGFGVLIPSIEQQ 476 NV+RPLEGFGVL+PS EQQ Sbjct: 349 NVKRPLEGFGVLVPSKEQQ 367 >emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera] Length = 809 Score = 194 bits (494), Expect = 5e-48 Identities = 97/139 (69%), Positives = 114/139 (82%), Gaps = 1/139 (0%) Frame = +3 Query: 63 SSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKVLSLSCSLDENSLFDNWSISY 239 SS KK QRG FSF GGMQ+L + LCKELG D +L SKVLSLS S E S +NWS++Y Sbjct: 241 SSEKKKRQRGSFSFQGGMQTLTDTLCKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAY 300 Query: 240 APNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLDFLPEVNYMPLSVVITTYKKE 419 A N K S D SFDAVIMTAPLCNV+EMKI+++G PF+LDFLPEV+Y+PLSV+ITT+KKE Sbjct: 301 ASNPGKQSKDLSFDAVIMTAPLCNVREMKIMKKGNPFLLDFLPEVSYLPLSVIITTFKKE 360 Query: 420 NVRRPLEGFGVLIPSIEQQ 476 NV+RPLEGFGVL+PS EQQ Sbjct: 361 NVKRPLEGFGVLVPSKEQQ 379 >sp|O24164.1|PPOM_TOBAC RecName: Full=Protoporphyrinogen oxidase, mitochondrial; AltName: Full=PX-2; AltName: Full=Protoporphyrinogen IX oxidase isozyme II; Short=PPO II; Short=PPX II gi|2370335|emb|CAA73866.1| protoporphyrinogen oxidase [Nicotiana tabacum] gi|3929920|dbj|BAA34712.1| mitochondrial protoporphyrinogen oxidase [Nicotiana tabacum] gi|4105188|gb|AAD02291.1| protoporphyrinogen oxidase PX-2 [Nicotiana tabacum] Length = 504 Score = 183 bits (464), Expect = 1e-44 Identities = 93/159 (58%), Positives = 117/159 (73%), Gaps = 1/159 (0%) Frame = +3 Query: 3 VGAIRSXXXXXXXXXXXMDPSSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKV 179 +GAIRS +S K QRG FSF GGMQ+L + +CK+L D +LNS+V Sbjct: 205 LGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRV 264 Query: 180 LSLSCSLDENSLFDNWSISYAPNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLD 359 L LSCS E+S D+WSI A HK+ S ++SFDAVIMTAPLC+VK MKI +RG PF+L+ Sbjct: 265 LELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLN 324 Query: 360 FLPEVNYMPLSVVITTYKKENVRRPLEGFGVLIPSIEQQ 476 F+PEV+Y+PLSVVITT+K+ENV+ PLEGFGVL+PS EQQ Sbjct: 325 FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQ 363 >emb|CAA12401.1| protoporphyrinogen oxidase [Solanum tuberosum] Length = 404 Score = 178 bits (451), Expect = 5e-43 Identities = 91/159 (57%), Positives = 116/159 (72%), Gaps = 1/159 (0%) Frame = +3 Query: 3 VGAIRSXXXXXXXXXXXMDPSSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKV 179 VGAIRS +S K QRG FSF GGMQ+L + +CK+L D +LNS+V Sbjct: 205 VGAIRSKLSPIKEKKQGPPKTSVNKKRQRGSFSFLGGMQTLTDAICKDLKEDELRLNSRV 264 Query: 180 LSLSCSLDENSLFDNWSISYAPNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLD 359 L LSCS +S D+WSI A HK+ + ++SFDAVIMTAPLC+VK MKI +RG PF+L+ Sbjct: 265 LELSCSCSGDSAIDSWSIFSASPHKRQAEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLN 324 Query: 360 FLPEVNYMPLSVVITTYKKENVRRPLEGFGVLIPSIEQQ 476 F+PEV+Y+PLSVVITT+KKE+V+ PLEGFGVL+PS EQ+ Sbjct: 325 FIPEVDYVPLSVVITTFKKESVKHPLEGFGVLVPSQEQK 363 >pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix Oxidase gi|48425679|pdb|1SEZ|B Chain B, Crystal Structure Of Protoporphyrinogen Ix Oxidase Length = 504 Score = 176 bits (446), Expect = 2e-42 Identities = 90/159 (56%), Positives = 114/159 (71%), Gaps = 1/159 (0%) Frame = +3 Query: 3 VGAIRSXXXXXXXXXXXMDPSSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKV 179 +GAIRS +S K QRG FSF GG Q+L + +CK+L D +LNS+V Sbjct: 205 LGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGXQTLTDAICKDLREDELRLNSRV 264 Query: 180 LSLSCSLDENSLFDNWSISYAPNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLD 359 L LSCS E+S D+WSI A HK+ S ++SFDAVI TAPLC+VK KI +RG PF+L+ Sbjct: 265 LELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIXTAPLCDVKSXKIAKRGNPFLLN 324 Query: 360 FLPEVNYMPLSVVITTYKKENVRRPLEGFGVLIPSIEQQ 476 F+PEV+Y+PLSVVITT+K+ENV+ PLEGFGVL+PS EQQ Sbjct: 325 FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQ 363