BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012886
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc...   194   5e-48
emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera]   194   5e-48
sp|O24164.1|PPOM_TOBAC RecName: Full=Protoporphyrinogen oxidase,...   183   1e-44
emb|CAA12401.1| protoporphyrinogen oxidase [Solanum tuberosum]        178   5e-43
pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix O...   176   2e-42

>ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis
           vinifera] gi|296090240|emb|CBI40059.3| unnamed protein
           product [Vitis vinifera]
          Length = 508

 Score =  194 bits (494), Expect = 5e-48
 Identities = 97/139 (69%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
 Frame = +3

Query: 63  SSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKVLSLSCSLDENSLFDNWSISY 239
           SS KK  QRG FSF GGMQ+L + LCKELG D  +L SKVLSLS S  E S  +NWS++Y
Sbjct: 229 SSEKKKRQRGSFSFQGGMQTLTDTLCKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAY 288

Query: 240 APNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLDFLPEVNYMPLSVVITTYKKE 419
           A N  K S D SFDAVIMTAPLCNV+EMKI+++G PF+LDFLPEV+Y+PLSV+ITT+KKE
Sbjct: 289 ASNPGKQSKDLSFDAVIMTAPLCNVREMKIMKKGNPFLLDFLPEVSYLPLSVIITTFKKE 348

Query: 420 NVRRPLEGFGVLIPSIEQQ 476
           NV+RPLEGFGVL+PS EQQ
Sbjct: 349 NVKRPLEGFGVLVPSKEQQ 367


>emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera]
          Length = 809

 Score =  194 bits (494), Expect = 5e-48
 Identities = 97/139 (69%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
 Frame = +3

Query: 63  SSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKVLSLSCSLDENSLFDNWSISY 239
           SS KK  QRG FSF GGMQ+L + LCKELG D  +L SKVLSLS S  E S  +NWS++Y
Sbjct: 241 SSEKKKRQRGSFSFQGGMQTLTDTLCKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAY 300

Query: 240 APNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLDFLPEVNYMPLSVVITTYKKE 419
           A N  K S D SFDAVIMTAPLCNV+EMKI+++G PF+LDFLPEV+Y+PLSV+ITT+KKE
Sbjct: 301 ASNPGKQSKDLSFDAVIMTAPLCNVREMKIMKKGNPFLLDFLPEVSYLPLSVIITTFKKE 360

Query: 420 NVRRPLEGFGVLIPSIEQQ 476
           NV+RPLEGFGVL+PS EQQ
Sbjct: 361 NVKRPLEGFGVLVPSKEQQ 379


>sp|O24164.1|PPOM_TOBAC RecName: Full=Protoporphyrinogen oxidase, mitochondrial; AltName:
           Full=PX-2; AltName: Full=Protoporphyrinogen IX oxidase
           isozyme II; Short=PPO II; Short=PPX II
           gi|2370335|emb|CAA73866.1| protoporphyrinogen oxidase
           [Nicotiana tabacum] gi|3929920|dbj|BAA34712.1|
           mitochondrial protoporphyrinogen oxidase [Nicotiana
           tabacum] gi|4105188|gb|AAD02291.1| protoporphyrinogen
           oxidase PX-2 [Nicotiana tabacum]
          Length = 504

 Score =  183 bits (464), Expect = 1e-44
 Identities = 93/159 (58%), Positives = 117/159 (73%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3   VGAIRSXXXXXXXXXXXMDPSSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKV 179
           +GAIRS              +S  K  QRG FSF GGMQ+L + +CK+L  D  +LNS+V
Sbjct: 205 LGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRV 264

Query: 180 LSLSCSLDENSLFDNWSISYAPNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLD 359
           L LSCS  E+S  D+WSI  A  HK+ S ++SFDAVIMTAPLC+VK MKI +RG PF+L+
Sbjct: 265 LELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLN 324

Query: 360 FLPEVNYMPLSVVITTYKKENVRRPLEGFGVLIPSIEQQ 476
           F+PEV+Y+PLSVVITT+K+ENV+ PLEGFGVL+PS EQQ
Sbjct: 325 FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQ 363


>emb|CAA12401.1| protoporphyrinogen oxidase [Solanum tuberosum]
          Length = 404

 Score =  178 bits (451), Expect = 5e-43
 Identities = 91/159 (57%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3   VGAIRSXXXXXXXXXXXMDPSSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKV 179
           VGAIRS              +S  K  QRG FSF GGMQ+L + +CK+L  D  +LNS+V
Sbjct: 205 VGAIRSKLSPIKEKKQGPPKTSVNKKRQRGSFSFLGGMQTLTDAICKDLKEDELRLNSRV 264

Query: 180 LSLSCSLDENSLFDNWSISYAPNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLD 359
           L LSCS   +S  D+WSI  A  HK+ + ++SFDAVIMTAPLC+VK MKI +RG PF+L+
Sbjct: 265 LELSCSCSGDSAIDSWSIFSASPHKRQAEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLN 324

Query: 360 FLPEVNYMPLSVVITTYKKENVRRPLEGFGVLIPSIEQQ 476
           F+PEV+Y+PLSVVITT+KKE+V+ PLEGFGVL+PS EQ+
Sbjct: 325 FIPEVDYVPLSVVITTFKKESVKHPLEGFGVLVPSQEQK 363


>pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix Oxidase
           gi|48425679|pdb|1SEZ|B Chain B, Crystal Structure Of
           Protoporphyrinogen Ix Oxidase
          Length = 504

 Score =  176 bits (446), Expect = 2e-42
 Identities = 90/159 (56%), Positives = 114/159 (71%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3   VGAIRSXXXXXXXXXXXMDPSSGKKNAQRGPFSFHGGMQSLANMLCKELG-DSFKLNSKV 179
           +GAIRS              +S  K  QRG FSF GG Q+L + +CK+L  D  +LNS+V
Sbjct: 205 LGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGXQTLTDAICKDLREDELRLNSRV 264

Query: 180 LSLSCSLDENSLFDNWSISYAPNHKKPSPDQSFDAVIMTAPLCNVKEMKILRRGYPFMLD 359
           L LSCS  E+S  D+WSI  A  HK+ S ++SFDAVI TAPLC+VK  KI +RG PF+L+
Sbjct: 265 LELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIXTAPLCDVKSXKIAKRGNPFLLN 324

Query: 360 FLPEVNYMPLSVVITTYKKENVRRPLEGFGVLIPSIEQQ 476
           F+PEV+Y+PLSVVITT+K+ENV+ PLEGFGVL+PS EQQ
Sbjct: 325 FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQ 363