BLASTX nr result

ID: Coptis25_contig00012881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012881
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284902.1| PREDICTED: ankyrin repeat-containing protein...    84   2e-14
ref|XP_004150616.1| PREDICTED: ankyrin repeat-containing protein...    83   3e-14
ref|XP_002311530.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_002315857.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
gb|ABK94575.1| unknown [Populus trichocarpa]                           81   8e-14

>ref|XP_002284902.1| PREDICTED: ankyrin repeat-containing protein At2g01680 [Vitis
           vinifera]
          Length = 532

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/86 (50%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
 Frame = -3

Query: 256 VRSGDLHTLKQLL-QAAPXXXXXXXXXXXXXSLQNDAGETALYIAADNNLEQVFSYLLTF 80
           VRSGDL +LKQ++ +                +++NDA ETALYIAADNNL ++F+YLL F
Sbjct: 18  VRSGDLESLKQIIHKLTEEEPSVRASILALMAVKNDADETALYIAADNNLHEIFTYLLQF 77

Query: 79  ADLSPLLILSKLNMNPFHIASKRGHL 2
            DL  ++I SK  M+ FH+A+KRGHL
Sbjct: 78  CDLQTVMIRSKSGMDAFHVAAKRGHL 103


>ref|XP_004150616.1| PREDICTED: ankyrin repeat-containing protein At2g01680-like
           [Cucumis sativus]
          Length = 530

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = -3

Query: 256 VRSGDLHTLKQLL-QAAPXXXXXXXXXXXXXSLQNDAGETALYIAADNNLEQVFSYLLTF 80
           VRSGDL  +KQ+L +                ++QNDAGET LY+AA+NNLE+VF+YLL F
Sbjct: 18  VRSGDLEAVKQVLDKLGGDDQAEGSSITDLMAMQNDAGETPLYVAAENNLEEVFTYLLQF 77

Query: 79  ADLSPLLILSKLNMNPFHIASKRGHL 2
           + +  L I SK +++PFH+A+KRGHL
Sbjct: 78  STVQILKIRSKSDLHPFHVAAKRGHL 103


>ref|XP_002311530.1| predicted protein [Populus trichocarpa] gi|222851350|gb|EEE88897.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = -3

Query: 256 VRSGDLHTLKQLLQAAPXXXXXXXXXXXXXSLQNDAGETALYIAADNNLEQVFSYLLTFA 77
           VRSGDL +LKQ++   P              LQ +AGETALYIAADNNLE+VFSYL+   
Sbjct: 23  VRSGDLDSLKQIVGEQPSDVSDLMS------LQTNAGETALYIAADNNLEEVFSYLVKLC 76

Query: 76  DLSPLLILSKLNMNPFHIASKRGHL 2
           D   + I SK ++N FH+A+K+GHL
Sbjct: 77  DFETVKIRSKSDLNAFHLAAKKGHL 101


>ref|XP_002315857.1| predicted protein [Populus trichocarpa] gi|222864897|gb|EEF02028.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/85 (50%), Positives = 57/85 (67%)
 Frame = -3

Query: 256 VRSGDLHTLKQLLQAAPXXXXXXXXXXXXXSLQNDAGETALYIAADNNLEQVFSYLLTFA 77
           VRSGDL +L+Q++   P              LQ DAGETALYIAADNNLE++FSYL+   
Sbjct: 20  VRSGDLDSLRQIVGDQPSDVSDLMS------LQTDAGETALYIAADNNLEEIFSYLIKRC 73

Query: 76  DLSPLLILSKLNMNPFHIASKRGHL 2
           DL  + I SK +++ FH+A+K+GHL
Sbjct: 74  DLETVKIRSKSDLDAFHLAAKKGHL 98


>gb|ABK94575.1| unknown [Populus trichocarpa]
          Length = 529

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/85 (50%), Positives = 57/85 (67%)
 Frame = -3

Query: 256 VRSGDLHTLKQLLQAAPXXXXXXXXXXXXXSLQNDAGETALYIAADNNLEQVFSYLLTFA 77
           VRSGDL +L+Q++   P              LQ DAGETALYIAADNNLE++FSYL+   
Sbjct: 23  VRSGDLDSLRQIVGDQPSDVSDLMS------LQTDAGETALYIAADNNLEEIFSYLIKRC 76

Query: 76  DLSPLLILSKLNMNPFHIASKRGHL 2
           DL  + I SK +++ FH+A+K+GHL
Sbjct: 77  DLETVKIRSKSDLDAFHLAAKKGHL 101


Top