BLASTX nr result

ID: Coptis25_contig00012876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012876
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24703.3| unnamed protein product [Vitis vinifera]              312   7e-83
ref|XP_003632086.1| PREDICTED: syntaxin-61-like [Vitis vinifera]...   310   3e-82
ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|2...   292   1e-76
ref|XP_004145007.1| PREDICTED: syntaxin-61-like [Cucumis sativus...   290   4e-76
ref|XP_002331940.1| predicted protein [Populus trichocarpa] gi|2...   288   1e-75

>emb|CBI24703.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  312 bits (800), Expect = 7e-83
 Identities = 159/212 (75%), Positives = 185/212 (87%), Gaps = 1/212 (0%)
 Frame = -3

Query: 928 KMSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQVDE 749
           KMSSAQDPFYIVKEEIQ+SIDKL STFHQW+ I   TG++V LTKELLA+CESI WQVDE
Sbjct: 54  KMSSAQDPFYIVKEEIQESIDKLLSTFHQWERIPVETGEQVHLTKELLASCESIEWQVDE 113

Query: 748 LDKTIAVAARDPAFFSIDQVELEKRKRWTSTARTQVATVRKSVESGKEQNNT-ISNVNGM 572
           LDKTI+VAA+DPA++ ID+VEL+KR+RWTSTA TQV+ V+KSV +GKE N T  +NVNGM
Sbjct: 114 LDKTISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGTGTANVNGM 173

Query: 571 RQELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSASVVRIGD 392
           R+E+MR  N  P+QA RSNQYG++DNDDFISSESDRQLLL+R+QDEELD LSASV RIG 
Sbjct: 174 RREMMRMSN--PHQADRSNQYGSQDNDDFISSESDRQLLLIRRQDEELDVLSASVERIGG 231

Query: 391 VGLTIHDELTGQEKIIHELGLDMESTSNRLDF 296
           VGLTIH+EL  QEKII ELG +M+STSNRLDF
Sbjct: 232 VGLTIHEELLAQEKIIDELGSEMDSTSNRLDF 263


>ref|XP_003632086.1| PREDICTED: syntaxin-61-like [Vitis vinifera]
           gi|147821239|emb|CAN72346.1| hypothetical protein
           VITISV_034578 [Vitis vinifera]
          Length = 247

 Score =  310 bits (795), Expect = 3e-82
 Identities = 158/211 (74%), Positives = 184/211 (87%), Gaps = 1/211 (0%)
 Frame = -3

Query: 925 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQVDEL 746
           MSSAQDPFYIVKEEIQ+SIDKL STFHQW+ I   TG++V LTKELLA+CESI WQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLLSTFHQWERIPVETGEQVHLTKELLASCESIEWQVDEL 60

Query: 745 DKTIAVAARDPAFFSIDQVELEKRKRWTSTARTQVATVRKSVESGKEQNNT-ISNVNGMR 569
           DKTI+VAA+DPA++ ID+VEL+KR+RWTSTA TQV+ V+KSV +GKE N T  +NVNGMR
Sbjct: 61  DKTISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGTGTANVNGMR 120

Query: 568 QELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSASVVRIGDV 389
           +E+MR  N  P+QA RSNQYG++DNDDFISSESDRQLLL+R+QDEELD LSASV RIG V
Sbjct: 121 REMMRMSN--PHQADRSNQYGSQDNDDFISSESDRQLLLIRRQDEELDVLSASVERIGGV 178

Query: 388 GLTIHDELTGQEKIIHELGLDMESTSNRLDF 296
           GLTIH+EL  QEKII ELG +M+STSNRLDF
Sbjct: 179 GLTIHEELLAQEKIIDELGSEMDSTSNRLDF 209


>ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|222848737|gb|EEE86284.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  292 bits (747), Expect = 1e-76
 Identities = 149/211 (70%), Positives = 182/211 (86%), Gaps = 1/211 (0%)
 Frame = -3

Query: 925 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQVDEL 746
           MSSAQDPFYIVKEEIQ+SIDKLQS+FHQW+ ISS++G++VRLTKELLAACESI WQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESIEWQVDEL 60

Query: 745 DKTIAVAARDPAFFSIDQVELEKRKRWTSTARTQVATVRKSVESGKEQN-NTISNVNGMR 569
           DK I+VAARDP+++ ID+ ELEKR+RWTSTARTQV  V+K+V +GKE N +  ++VNGMR
Sbjct: 61  DKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMR 120

Query: 568 QELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSASVVRIGDV 389
           +ELMR P+    Q  +SNQY  +DNDDFI SESDRQ+LL++QQD+ELDELSASV RIG V
Sbjct: 121 RELMRMPD--AQQTDKSNQY-TQDNDDFIQSESDRQMLLIKQQDDELDELSASVERIGGV 177

Query: 388 GLTIHDELTGQEKIIHELGLDMESTSNRLDF 296
           GLTIH+EL  QE+II +L  +M++TSNRLDF
Sbjct: 178 GLTIHEELLAQERIIGDLDTEMDTTSNRLDF 208


>ref|XP_004145007.1| PREDICTED: syntaxin-61-like [Cucumis sativus]
           gi|449474827|ref|XP_004154296.1| PREDICTED:
           syntaxin-61-like [Cucumis sativus]
           gi|449498935|ref|XP_004160675.1| PREDICTED:
           syntaxin-61-like [Cucumis sativus]
          Length = 246

 Score =  290 bits (742), Expect = 4e-76
 Identities = 149/211 (70%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
 Frame = -3

Query: 925 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQVDEL 746
           M SAQDPFY+VK+EIQ+SIDKLQS+FHQW+ ISS++G+RV+ TKELLA+CESI WQVDEL
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDEL 60

Query: 745 DKTIAVAARDPAFFSIDQVELEKRKRWTSTARTQVATVRKSVESGKEQNNTISNVNGMRQ 566
           DK IAVAARDP+++ ID  ELEKR+RWTSTARTQV  V+K V +GKEQ  T S  +GMR+
Sbjct: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTAS-ASGMRR 119

Query: 565 ELMRFPNDSPYQASRSNQYGARD-NDDFISSESDRQLLLMRQQDEELDELSASVVRIGDV 389
           ELMR PN   ++  RSN Y A   NDDFI+SESDRQLLL++QQDEELDELSASV RIG V
Sbjct: 120 ELMRLPN--AHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGV 177

Query: 388 GLTIHDELTGQEKIIHELGLDMESTSNRLDF 296
           GLTIH+EL  Q+KII +LG++M+STSNRLDF
Sbjct: 178 GLTIHEELLAQDKIIDDLGMEMDSTSNRLDF 208


>ref|XP_002331940.1| predicted protein [Populus trichocarpa] gi|222874717|gb|EEF11848.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  288 bits (738), Expect = 1e-75
 Identities = 146/211 (69%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
 Frame = -3

Query: 925 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESIAWQVDEL 746
           MSSAQDPFYIVKEEIQ+SIDKLQS+FHQW+ IS + GD+V LTK+LLAACESI WQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISCDMGDQVHLTKDLLAACESIEWQVDEL 60

Query: 745 DKTIAVAARDPAFFSIDQVELEKRKRWTSTARTQVATVRKSVESGKEQN-NTISNVNGMR 569
           DK I+VA RDP+++ ID+ ELEKR+RWTSTAR QV  V+K+V +G+E N +  ++V+GMR
Sbjct: 61  DKAISVAGRDPSWYGIDEAELEKRRRWTSTARNQVGNVKKAVVAGREVNISGTASVSGMR 120

Query: 568 QELMRFPNDSPYQASRSNQYGARDNDDFISSESDRQLLLMRQQDEELDELSASVVRIGDV 389
           +ELMR PN    QA +SNQY  +DNDDFI SESDRQLLL++QQDEELDELS ++ R G V
Sbjct: 121 RELMRMPNSQ--QADKSNQY-TQDNDDFIQSESDRQLLLIKQQDEELDELSITIGRFGGV 177

Query: 388 GLTIHDELTGQEKIIHELGLDMESTSNRLDF 296
           GLTIH+EL  QEKII +LG++M+STSNRLDF
Sbjct: 178 GLTIHEELLAQEKIIDDLGMEMDSTSNRLDF 208


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