BLASTX nr result

ID: Coptis25_contig00012864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012864
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31257.3| unnamed protein product [Vitis vinifera]              325   1e-86
ref|XP_002525514.1| conserved hypothetical protein [Ricinus comm...   325   1e-86
ref|XP_002327389.1| predicted protein [Populus trichocarpa] gi|1...   310   6e-82
gb|ABK95224.1| unknown [Populus trichocarpa]                          306   9e-81
ref|XP_002325508.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80

>emb|CBI31257.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  325 bits (834), Expect = 1e-86
 Identities = 183/302 (60%), Positives = 201/302 (66%)
 Frame = -1

Query: 1106 PTSFLFPFKPKRFHLFKPCXXXXXXXXXXXXXXXSINKFPLSLTRLVSSKDSNGDNDEKK 927
            P+SFLF F+PKRFH  KPC                     L  T+    K S+G N  + 
Sbjct: 29   PSSFLFSFRPKRFHFLKPCSS-------------------LKQTKKQLQKTSSGSNAPQS 69

Query: 926  LSDDGFGGENAFKXXXXXXXXXXXXXXXXXXXXXXYRDQINSFLTQFTGFIEGYGPAGYA 747
            L    F    + K                      YRDQIN+FLTQF+GFIEGYGPAGYA
Sbjct: 70   LR--WFLNPKSIKGTLLAGLLLVGVVGGFATVGYVYRDQINAFLTQFSGFIEGYGPAGYA 127

Query: 746  LFVVVYAGLEILAIPAIPLTMSAGVLFGTYTGTIIVSISGTVAATLAFLIARYFARERIL 567
            LFV VYAGLEILAIPAIPLTMSAG+LFG++TGTIIVSISGTVAA++AFLIARYFARERIL
Sbjct: 128  LFVAVYAGLEILAIPAIPLTMSAGLLFGSFTGTIIVSISGTVAASVAFLIARYFARERIL 187

Query: 566  KMVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXLGNYLYGLTSVKFLPYVLGSWLGM 387
            K+VEGNKKFLAIDKAIGENGFRVVT           LGNYLYGLTSVKF+PYVLGSWLGM
Sbjct: 188  KLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGM 247

Query: 386  LPGTWAYVSAGAFGRAIIQEESDAGLVXXXXXXXXXXXXXXXXXXXXAYVTRLANDAVKD 207
            LPGTWAYVSAGAFGRAIIQ+ESD GL+                     YVTRLA DAVKD
Sbjct: 248  LPGTWAYVSAGAFGRAIIQDESDIGLLGGNNSLITLGLGLLVTALAATYVTRLAKDAVKD 307

Query: 206  LE 201
            +E
Sbjct: 308  IE 309


>ref|XP_002525514.1| conserved hypothetical protein [Ricinus communis]
            gi|223535193|gb|EEF36872.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 334

 Score =  325 bits (833), Expect = 1e-86
 Identities = 193/326 (59%), Positives = 213/326 (65%), Gaps = 5/326 (1%)
 Frame = -1

Query: 1163 HTSSSPSLRPTSFLLPQLRPTSFLFPFKP-KRFHLFKPCXXXXXXXXXXXXXXXSINKFP 987
            H+SSS S   +         TSFL+ F+P KRFH   PC                 N  P
Sbjct: 20   HSSSSSSSSSSC--------TSFLYSFRPNKRFHFLTPCSSLKQTKKQTLQKS---NTAP 68

Query: 986  LSLTRLVSSKDSNGDNDE--KKLSDDGFG--GENAFKXXXXXXXXXXXXXXXXXXXXXXY 819
             SL   ++ K S  D+D+  K  +DDG G  G+ A K                      Y
Sbjct: 69   QSLRWFLNPKGSGDDDDKINKGENDDGGGLEGDTAIKGTLLAGVLLVGVVGGFGAVGYVY 128

Query: 818  RDQINSFLTQFTGFIEGYGPAGYALFVVVYAGLEILAIPAIPLTMSAGVLFGTYTGTIIV 639
            RDQIN+FL QF+GFIEGYGPAGYALFV VYAGLEILAIPAIPLTMSAG+LFG+  GTIIV
Sbjct: 129  RDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVIGTIIV 188

Query: 638  SISGTVAATLAFLIARYFARERILKMVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXX 459
            SISGTVAA++AFLIARYFARERILK+VEGNKKFLAIDKAIGENGFRVVT           
Sbjct: 189  SISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFS 248

Query: 458  LGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESDAGLVXXXXXXXXX 279
            LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESD GLV         
Sbjct: 249  LGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESDIGLVGGNNSLLTL 308

Query: 278  XXXXXXXXXXXAYVTRLANDAVKDLE 201
                       AYVT+LA DAVKD+E
Sbjct: 309  GLGLLVTALAAAYVTKLAKDAVKDIE 334


>ref|XP_002327389.1| predicted protein [Populus trichocarpa] gi|118487737|gb|ABK95692.1|
            unknown [Populus trichocarpa] gi|222835759|gb|EEE74194.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  310 bits (793), Expect = 6e-82
 Identities = 186/338 (55%), Positives = 208/338 (61%), Gaps = 12/338 (3%)
 Frame = -1

Query: 1178 MRTLTHTSSSPSLRPTSFLLPQLRP-----TSFLFPFKP-KRFHLFKPCXXXXXXXXXXX 1017
            MRTL +  S P   P  FL           T F + F+P KR H   PC           
Sbjct: 1    MRTLLN--SRPLTPPPPFLTSNFHSSPPPCTLFHYSFRPNKRIHFLTPCSSLKQRKKQPE 58

Query: 1016 XXXXSINKFPLSLTRLVSSKDSNGDNDEKKLSDDG------FGGENAFKXXXXXXXXXXX 855
                     P SL   ++ K   GD+ + K+  DG        G+ AFK           
Sbjct: 59   TLRK--TNAPQSLRWFLNPK---GDDSDDKIKGDGGEAEEGLEGDTAFKGTLLAGVLLVG 113

Query: 854  XXXXXXXXXXXYRDQINSFLTQFTGFIEGYGPAGYALFVVVYAGLEILAIPAIPLTMSAG 675
                       Y+DQIN+FL QF+GFIEGYGPAGYALFV VYAGLEILAIPAIPLTMSAG
Sbjct: 114  VVGGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAG 173

Query: 674  VLFGTYTGTIIVSISGTVAATLAFLIARYFARERILKMVEGNKKFLAIDKAIGENGFRVV 495
            +LFG+  GTIIVSISGTVAA++AFLIARYFARERILK+V+GNKKFLAIDKAIGENGF+VV
Sbjct: 174  LLFGSLIGTIIVSISGTVAASIAFLIARYFARERILKLVQGNKKFLAIDKAIGENGFKVV 233

Query: 494  TXXXXXXXXXXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESDA 315
            T           LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSAGAFGRAIIQEES+ 
Sbjct: 234  TLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESEI 293

Query: 314  GLVXXXXXXXXXXXXXXXXXXXXAYVTRLANDAVKDLE 201
            GL                      YVTRLA DAVKD+E
Sbjct: 294  GLGGGNGGLWTLGLGLLVTAIAATYVTRLAKDAVKDIE 331


>gb|ABK95224.1| unknown [Populus trichocarpa]
          Length = 321

 Score =  306 bits (783), Expect = 9e-81
 Identities = 181/329 (55%), Positives = 205/329 (62%), Gaps = 3/329 (0%)
 Frame = -1

Query: 1178 MRTLTHTSSSPSLRPTSFLLPQLRPTSFLFPFK---PKRFHLFKPCXXXXXXXXXXXXXX 1008
            MRTL ++     L P         P   LF +     KRFH   PC              
Sbjct: 1    MRTLLNSRPLTPLPPCLASNFNSSPFRSLFHYSLRTNKRFHFLSPCSSLKQKKKQQQTLR 60

Query: 1007 XSINKFPLSLTRLVSSKDSNGDNDEKKLSDDGFGGENAFKXXXXXXXXXXXXXXXXXXXX 828
                  P S+   +++K   GD+ E   +++G  G+ AFK                    
Sbjct: 61   K--TNAPQSVRWFLNTK---GDDSE---AEEGLEGDTAFKGTLLAGVLLVGVVGGFGAVG 112

Query: 827  XXYRDQINSFLTQFTGFIEGYGPAGYALFVVVYAGLEILAIPAIPLTMSAGVLFGTYTGT 648
              Y+DQIN+FL QF+GFIEGYGPAGYALFV VYAGLEILAIPAIPLTMSAG+LFG+  GT
Sbjct: 113  YIYKDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSLIGT 172

Query: 647  IIVSISGTVAATLAFLIARYFARERILKMVEGNKKFLAIDKAIGENGFRVVTXXXXXXXX 468
            IIVSISGT AA++AFLIARYFARERILK+VEGNKKFLAIDKAIGENGF+VVT        
Sbjct: 173  IIVSISGTAAASIAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLL 232

Query: 467  XXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESDAGLVXXXXXX 288
               LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSAGAFGRAIIQEES+ GL       
Sbjct: 233  PFSLGNYLYGLTSVKFIPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESELGLREGNSGL 292

Query: 287  XXXXXXXXXXXXXXAYVTRLANDAVKDLE 201
                           YVTRLA DAVKD+E
Sbjct: 293  LTLGLGLLVTAIAATYVTRLAKDAVKDIE 321


>ref|XP_002325508.1| predicted protein [Populus trichocarpa] gi|222862383|gb|EEE99889.1|
            predicted protein [Populus trichocarpa]
          Length = 289

 Score =  305 bits (780), Expect = 2e-80
 Identities = 172/292 (58%), Positives = 193/292 (66%)
 Frame = -1

Query: 1076 KRFHLFKPCXXXXXXXXXXXXXXXSINKFPLSLTRLVSSKDSNGDNDEKKLSDDGFGGEN 897
            KRFH   PC                    P S+   +++K   GD+ E   +++G  G+ 
Sbjct: 6    KRFHFLSPCSSLKQKKKQQQTLRK--TNAPQSVRWFLNTK---GDDSE---AEEGLEGDT 57

Query: 896  AFKXXXXXXXXXXXXXXXXXXXXXXYRDQINSFLTQFTGFIEGYGPAGYALFVVVYAGLE 717
            AFK                      Y+DQIN+FL QF+GFIEGYGPAGYALFV VYAGLE
Sbjct: 58   AFKGTLLAGVLLVGVVGGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLE 117

Query: 716  ILAIPAIPLTMSAGVLFGTYTGTIIVSISGTVAATLAFLIARYFARERILKMVEGNKKFL 537
            ILAIPAIPLTMSAG+LFG+  GTIIVSISGT AA++AFLIARYFARERILK+VEGNKKFL
Sbjct: 118  ILAIPAIPLTMSAGLLFGSLIGTIIVSISGTAAASIAFLIARYFARERILKLVEGNKKFL 177

Query: 536  AIDKAIGENGFRVVTXXXXXXXXXXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSA 357
            AIDKAIGENGF+VVT           LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSA
Sbjct: 178  AIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSWLGMLPGTWAYVSA 237

Query: 356  GAFGRAIIQEESDAGLVXXXXXXXXXXXXXXXXXXXXAYVTRLANDAVKDLE 201
            GAFGRAIIQEES+ GL                      YVTRLA DAVKD+E
Sbjct: 238  GAFGRAIIQEESELGLREGNSGLWTLGLGLLVTAIAATYVTRLAKDAVKDIE 289


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