BLASTX nr result

ID: Coptis25_contig00012863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012863
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210...   173   7e-41
ref|XP_002509538.1| conserved hypothetical protein [Ricinus comm...   159   1e-36
ref|XP_002298614.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-33
emb|CAN62725.1| hypothetical protein VITISV_031003 [Vitis vinifera]   147   7e-33
ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210...   139   2e-30

>ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210-like [Vitis vinifera]
          Length = 247

 Score =  173 bits (439), Expect = 7e-41
 Identities = 113/242 (46%), Positives = 137/242 (56%), Gaps = 24/242 (9%)
 Frame = -1

Query: 1068 MGSCASVYKKEDAA---------KNDK-----PINGEC----PPVSVLSFKSQSSPMLPQ 943
            MGSC SV++   +A         K DK     PI        PP+  LS K+Q SP  P 
Sbjct: 1    MGSCVSVHRNPHSAMKLKVSFGSKADKLVIPSPIKDHPSIAEPPIGGLSHKAQWSPSQPI 60

Query: 942  TGFRDFGSKEEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHQSSFIGTPQ 763
            T FRDFGSKEEIFFDSQ WLESD  DDF SVNGDF      TPSRGNTP H +  IGTP 
Sbjct: 61   TPFRDFGSKEEIFFDSQPWLESD-SDDFHSVNGDF------TPSRGNTPVHPNVSIGTPH 113

Query: 762  LNKTIFMGTAENMKPEFSPTGKKKKLSDLFRESFQVDEDSGD------RNTDDGTLEVKP 601
             NK  F        P  SPTG+KKKL++LF ES + D D  D      +N  +G +EVK 
Sbjct: 114  ANKAPFENRVPASIPTPSPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVKR 173

Query: 600  TKLGIQSNASHESPYTSGANSDSNSKKTPSRDSISERVKSSRTGHQCCLPSLVPNRRSSE 421
            T L     +++ +P  SG NS  +  +TP+ D  SE+ K  R+  QCCLPSL  NR  +E
Sbjct: 174  TILDFPPESANGTPLASGPNSVCSGGRTPNGDFKSEKEKPLRS-TQCCLPSLRLNRSFNE 232

Query: 420  KK 415
            +K
Sbjct: 233  RK 234


>ref|XP_002509538.1| conserved hypothetical protein [Ricinus communis]
            gi|223549437|gb|EEF50925.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 236

 Score =  159 bits (402), Expect = 1e-36
 Identities = 103/233 (44%), Positives = 137/233 (58%), Gaps = 15/233 (6%)
 Frame = -1

Query: 1068 MGSCASVYK--KEDAAK-----NDKPINGECPPVSVLSFKSQSSPMLPQTGFRDFGSKEE 910
            MGSCASV+K   E A K       K  N   P   +       +   P   F D GSK+E
Sbjct: 1    MGSCASVHKGTPESAMKLGVSFGSKKDNLVIPESPIKD--KHVNDHTPIKTFDDHGSKDE 58

Query: 909  IFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHQSSFIGTPQLNKTIFMG--T 736
             FFDS+AWL+SDC+DDF SVNGDF      TPSRGNTP H +  +GTP++NKT   G   
Sbjct: 59   TFFDSRAWLDSDCEDDFFSVNGDF------TPSRGNTPVHHNFSMGTPKINKTTLEGRPP 112

Query: 735  AENMKPEFSPTGKKKKLSDLFRESFQVDED------SGDRNTDDGTLEVKPTKLGIQSNA 574
                 PE SPTG KK+LS+LFRES + +++      S  +N  +G  EVK T L +   +
Sbjct: 113  TPGSIPEPSPTG-KKRLSELFRESLREEQEADKLDSSRMQNIGNGKTEVKQTILDVLPKS 171

Query: 573  SHESPYTSGANSDSNSKKTPSRDSISERVKSSRTGHQCCLPSLVPNRRSSEKK 415
            +  +PY SGANS  +S++T + D++ ER KS ++  QCCLPSL+  R  S++K
Sbjct: 172  ASGTPYISGANSVCSSERTANGDALIEREKSIKSA-QCCLPSLISCRSFSDRK 223


>ref|XP_002298614.1| predicted protein [Populus trichocarpa] gi|222845872|gb|EEE83419.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  148 bits (374), Expect = 2e-33
 Identities = 83/177 (46%), Positives = 113/177 (63%), Gaps = 8/177 (4%)
 Frame = -1

Query: 921 SKEEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHQSSFIGTPQLNKTIFM 742
           SKEE FFDS+AWL+SDC+DDF SVNGDF      TPSRGNTP H +   GTPQ NK    
Sbjct: 152 SKEETFFDSRAWLDSDCEDDFYSVNGDF------TPSRGNTPVHHNFSAGTPQANKNPLE 205

Query: 741 GTAENMKPEFSPTGKKKKLSDLFRESFQVDED--------SGDRNTDDGTLEVKPTKLGI 586
           G     + E SPTG KK+LS+LF++  + D D        SGD+N  +G +EVK T L +
Sbjct: 206 GRPPGSELEPSPTG-KKRLSELFKDRIREDRDVDDLQTSGSGDQNIANGKMEVKQTILDV 264

Query: 585 QSNASHESPYTSGANSDSNSKKTPSRDSISERVKSSRTGHQCCLPSLVPNRRSSEKK 415
              +++ +PY SG NS  +S++T + D++ E+ KS ++   CC+PSL+  R  SE+K
Sbjct: 265 LPKSANATPYLSGTNSVCSSERTANGDALIEKEKSFKSS-PCCIPSLIFCRSFSERK 320


>emb|CAN62725.1| hypothetical protein VITISV_031003 [Vitis vinifera]
          Length = 196

 Score =  147 bits (370), Expect = 7e-33
 Identities = 95/201 (47%), Positives = 112/201 (55%), Gaps = 24/201 (11%)
 Frame = -1

Query: 1068 MGSCASVYKKEDAA---------KNDK-----PINGEC----PPVSVLSFKSQSSPMLPQ 943
            MGSC SV++   +A         K DK     PI        PP+  LS K+Q SP  P 
Sbjct: 1    MGSCVSVHRNPHSAMKLKVSFGSKADKLVIPSPIKDHPSIAEPPIGGLSHKAQWSPSQPI 60

Query: 942  TGFRDFGSKEEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHQSSFIGTPQ 763
            T FRDFGSKEEIFFDSQ WLESD  DDF SVNGDF      TPSRGNTP H +  IGTP 
Sbjct: 61   TPFRDFGSKEEIFFDSQPWLESD-SDDFHSVNGDF------TPSRGNTPVHPNVSIGTPH 113

Query: 762  LNKTIFMGTAENMKPEFSPTGKKKKLSDLFRESFQVDEDSGD------RNTDDGTLEVKP 601
             NK  F        P  SPTG+KKKL++LF ES + D D  D      +N  +G +EVK 
Sbjct: 114  ANKAPFENRVPASIPTPSPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVKR 173

Query: 600  TKLGIQSNASHESPYTSGANS 538
            T L     +++ +P  SG NS
Sbjct: 174  TILDFPPESANGTPLASGPNS 194


>ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus]
          Length = 219

 Score =  139 bits (349), Expect = 2e-30
 Identities = 93/221 (42%), Positives = 125/221 (56%), Gaps = 13/221 (5%)
 Frame = -1

Query: 1068 MGSCASVYKKEDAAKN------DKPINGECPPVSVLSFKSQSSPMLP------QTGFRDF 925
            MGSCAS+++  D+A         K  + E PP  +   K  ++P+ P      QT     
Sbjct: 1    MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPI---KQNNTPINPTVFLKSQTSPSHL 57

Query: 924  GSKEEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHQSSFIGTPQLNKTIF 745
            GSK+E FFDS+ WL+SDC+DDF SVNGDF      TPSRGNTP H S   GTP++N+   
Sbjct: 58   GSKDEAFFDSRGWLDSDCEDDFYSVNGDF------TPSRGNTPVHSSFSSGTPRINQVHG 111

Query: 744  MGTAENMK-PEFSPTGKKKKLSDLFRESFQVDEDSGDRNTDDGTLEVKPTKLGIQSNASH 568
            +     +  PE SPTG KK+L++LFRES         RN  D   +    +L +QSN   
Sbjct: 112  IDDQTPITIPEPSPTG-KKRLAELFRES--------SRNGTDRQAKPTLNELALQSNP-- 160

Query: 567  ESPYTSGANSDSNSKKTPSRDSISERVKSSRTGHQCCLPSL 445
            E+PY SG NS  +S++TP+ D   E+ +   +  QCCLPSL
Sbjct: 161  ETPYISGTNSVCSSERTPNGDVWGEKERPFGS-VQCCLPSL 200


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