BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012862
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597983.1| Pentatricopeptide repeat-containing protein ...    65   2e-08
ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [S...    64   5e-08
ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containi...    64   7e-08
ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containi...    64   7e-08
emb|CBI29169.3| unnamed protein product [Vitis vinifera]               64   7e-08

>ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487031|gb|AES68234.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 520

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = -3

Query: 942 DALIQKNMVDMARKYDEEMLVKGLSAKPRKELGTKP 835
           DAL++K ++DMARKYDEEML KGLS KPRKELGTKP
Sbjct: 444 DALVEKGLIDMARKYDEEMLAKGLSPKPRKELGTKP 479


>ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
           gi|241938389|gb|EES11534.1| hypothetical protein
           SORBIDRAFT_06g030430 [Sorghum bicolor]
          Length = 446

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 942 DALIQKNMVDMARKYDEEMLVKGLSAKPRKELGTK 838
           DAL+QK MVD+ARKYDEEML KGLS KPRKELGTK
Sbjct: 396 DALLQKGMVDLARKYDEEMLAKGLSPKPRKELGTK 430


>ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 571

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = -3

Query: 942 DALIQKNMVDMARKYDEEMLVKGLSAKPRKELGTKP 835
           DAL+QK MVD+ARKY+EEML KGLSAKPR +LGTKP
Sbjct: 533 DALVQKGMVDLARKYEEEMLAKGLSAKPRVDLGTKP 568


>ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 390

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = -3

Query: 942 DALIQKNMVDMARKYDEEMLVKGLSAKPRKELGTKP 835
           DAL+QK MVD+ARKY+EEML KGLSAKPR +LGTKP
Sbjct: 352 DALVQKGMVDLARKYEEEMLAKGLSAKPRVDLGTKP 387


>emb|CBI29169.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = -3

Query: 942 DALIQKNMVDMARKYDEEMLVKGLSAKPRKELGTKP 835
           DAL+QK MVD+ARKY+EEML KGLSAKPR +LGTKP
Sbjct: 196 DALVQKGMVDLARKYEEEMLAKGLSAKPRVDLGTKP 231