BLASTX nr result

ID: Coptis25_contig00012854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012854
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251...   164   9e-39
ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana] gi|4...   161   4e-38
ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subs...   159   2e-37
gb|AAM64721.1| unknown [Arabidopsis thaliana]                         159   3e-37

>ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251416 [Vitis vinifera]
           gi|296089606|emb|CBI39425.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/79 (97%), Positives = 78/79 (98%)
 Frame = -1

Query: 339 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLL 160
           KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLL
Sbjct: 155 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLL 214

Query: 159 AFAVLGTLGSILNNSRGAY 103
           AFAVLGTLGSILNNSRG Y
Sbjct: 215 AFAVLGTLGSILNNSRGMY 233


>ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|222843547|gb|EEE81094.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/79 (97%), Positives = 78/79 (98%)
 Frame = -1

Query: 339 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLL 160
           KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLL
Sbjct: 171 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLL 230

Query: 159 AFAVLGTLGSILNNSRGAY 103
           AFAVLGTLGSILN+SRG Y
Sbjct: 231 AFAVLGTLGSILNSSRGMY 249


>ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana]
           gi|4455358|emb|CAB36768.1| putative protein [Arabidopsis
           thaliana] gi|7269653|emb|CAB79601.1| putative protein
           [Arabidopsis thaliana] gi|110741138|dbj|BAE98662.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332660017|gb|AEE85417.1| YGGT family protein
           [Arabidopsis thaliana]
          Length = 218

 Score =  161 bits (408), Expect = 4e-38
 Identities = 76/77 (98%), Positives = 77/77 (100%)
 Frame = -1

Query: 339 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLL 160
           KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLL
Sbjct: 142 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLL 201

Query: 159 AFAVLGTLGSILNNSRG 109
           AFAVLGTLGSILNNSRG
Sbjct: 202 AFAVLGTLGSILNNSRG 218


>ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313311|gb|EFH43734.1| YGGT family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 210

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/76 (98%), Positives = 76/76 (100%)
 Frame = -1

Query: 339 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLL 160
           KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLL
Sbjct: 135 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLL 194

Query: 159 AFAVLGTLGSILNNSR 112
           AFAVLGTLGSILNNSR
Sbjct: 195 AFAVLGTLGSILNNSR 210


>gb|AAM64721.1| unknown [Arabidopsis thaliana]
          Length = 218

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = -1

Query: 339 KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLL 160
           KWLDIYSGVLMVRVLLSWFPNIPWD QPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLL
Sbjct: 142 KWLDIYSGVLMVRVLLSWFPNIPWDGQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLL 201

Query: 159 AFAVLGTLGSILNNSRG 109
           AFAVLGTLGSILNNSRG
Sbjct: 202 AFAVLGTLGSILNNSRG 218


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