BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012850
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   160   1e-37
emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]   160   1e-37
gb|ABR18062.1| unknown [Picea sitchensis]                             157   8e-37
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...   155   2e-36
gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   155   3e-36

>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
           product [Vitis vinifera]
          Length = 250

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/93 (81%), Positives = 83/93 (89%)
 Frame = -2

Query: 313 MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 134
           MSGRFSRTIYVGNLP DIRE EIED+FYKYG I+D+ELK PPRPP +CFVEFE++RDA+D
Sbjct: 1   MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60

Query: 133 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRR 35
           AIRGRDGY FD  RLRVELAHGGR Q SSSDRR
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRR 93


>emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
          Length = 267

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/93 (81%), Positives = 83/93 (89%)
 Frame = -2

Query: 313 MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 134
           MSGRFSRTIYVGNLP DIRE EIED+FYKYG I+D+ELK PPRPP +CFVEFE++RDA+D
Sbjct: 1   MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60

Query: 133 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRR 35
           AIRGRDGY FD  RLRVELAHGGR Q SSSDRR
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRR 93


>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/92 (79%), Positives = 82/92 (89%)
 Frame = -2

Query: 313 MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 134
           MS R SRT+YVGNLP DIRERE+ED+FYKYG IVDI+LK PPRPPG+CF+EFEDARDA+D
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAED 60

Query: 133 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDR 38
           AIRGRDGY FD  RLRVELAHGGR Q S++DR
Sbjct: 61  AIRGRDGYNFDGNRLRVELAHGGRGQSSTNDR 92


>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223540939|gb|EEF42497.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 264

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/93 (81%), Positives = 82/93 (88%)
 Frame = -2

Query: 313 MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 134
           MSGRFSRTIYVGNLP DIRE E+ED+FYKYG I+DIELK PPRPP +CFVEFE+ RDA+D
Sbjct: 1   MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60

Query: 133 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRR 35
           AIRGRDGY FD  RLRVELAHGGR Q SSSDRR
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGQ-SSSDRR 92


>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/93 (78%), Positives = 81/93 (87%)
 Frame = -2

Query: 313 MSGRFSRTIYVGNLPLDIREREIEDIFYKYGHIVDIELKTPPRPPGFCFVEFEDARDAQD 134
           MSGRFSR+IYVGNLP DI+E E+ED+FYKYG I+DIELK PPRPP +CFVEFE +RDA+D
Sbjct: 1   MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60

Query: 133 AIRGRDGYKFDKYRLRVELAHGGRSQLSSSDRR 35
           AIRGRDGY FD  RLRVELAHGGR   SSSDRR
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRR 93