BLASTX nr result

ID: Coptis25_contig00012835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012835
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514644.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
ref|XP_002328665.1| predicted protein [Populus trichocarpa] gi|1...    81   8e-14
ref|XP_002871303.1| hypothetical protein ARALYDRAFT_487637 [Arab...    80   1e-13
ref|XP_004137438.1| PREDICTED: uncharacterized protein LOC101204...    79   3e-13
ref|XP_002265727.2| PREDICTED: uncharacterized protein LOC100243...    77   1e-12

>ref|XP_002514644.1| conserved hypothetical protein [Ricinus communis]
           gi|223546248|gb|EEF47750.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 188

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = +1

Query: 1   LVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGGSAALAASNFVSNLQRS 147
           L+LGP C Y+VPEDYPWE+VLQVAVAL S+VGGSAA AASN VSNLQ+S
Sbjct: 139 LLLGPSCVYLVPEDYPWEIVLQVAVALVSVVGGSAAFAASNLVSNLQKS 187


>ref|XP_002328665.1| predicted protein [Populus trichocarpa] gi|118487258|gb|ABK95457.1|
           unknown [Populus trichocarpa]
           gi|118488248|gb|ABK95943.1| unknown [Populus
           trichocarpa] gi|222838841|gb|EEE77192.1| predicted
           protein [Populus trichocarpa]
          Length = 194

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/49 (77%), Positives = 41/49 (83%)
 Frame = +1

Query: 1   LVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGGSAALAASNFVSNLQRS 147
           L LGP CAY+VPEDYPWEV LQVAV L  + GGSAA AASNFVSNLQ+S
Sbjct: 145 LFLGPSCAYLVPEDYPWEVALQVAVVLLCVAGGSAAFAASNFVSNLQKS 193


>ref|XP_002871303.1| hypothetical protein ARALYDRAFT_487637 [Arabidopsis lyrata subsp.
           lyrata] gi|297317140|gb|EFH47562.1| hypothetical protein
           ARALYDRAFT_487637 [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = +1

Query: 1   LVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGGSAALAASNFVSNLQRS 147
           L+LGP+CAY+VPEDY WEVV+QV VAL S++GGSAA AAS FVSNLQ+S
Sbjct: 109 LLLGPVCAYVVPEDYTWEVVVQVLVALLSVLGGSAAFAASGFVSNLQKS 157


>ref|XP_004137438.1| PREDICTED: uncharacterized protein LOC101204037 [Cucumis sativus]
           gi|449486926|ref|XP_004157444.1| PREDICTED:
           uncharacterized protein LOC101227416 [Cucumis sativus]
          Length = 197

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/49 (79%), Positives = 42/49 (85%)
 Frame = +1

Query: 1   LVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGGSAALAASNFVSNLQRS 147
           L+LGP C Y+VPED  WE+VLQVAVAL SIVGGSAA AASN VSNLQRS
Sbjct: 148 LLLGPSCVYLVPEDSVWEIVLQVAVALVSIVGGSAAFAASNLVSNLQRS 196


>ref|XP_002265727.2| PREDICTED: uncharacterized protein LOC100243309 [Vitis vinifera]
          Length = 206

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = +1

Query: 1   LVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGGSAALAASNFVSNLQR 144
           L+LGP CA++VPEDYPWEV LQ+ VAL  +VGGSAA AASN VSNLQ+
Sbjct: 157 LLLGPSCAFLVPEDYPWEVALQLVVALVCVVGGSAAFAASNLVSNLQK 204


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