BLASTX nr result

ID: Coptis25_contig00012834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012834
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21551.3| unnamed protein product [Vitis vinifera]              360   3e-97
ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...   360   3e-97
emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]   360   3e-97
ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glyc...   350   3e-94
ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802...   350   3e-94

>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  360 bits (925), Expect = 3e-97
 Identities = 179/206 (86%), Positives = 191/206 (92%)
 Frame = -1

Query: 911 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGKVRDVRLIMDRNSRRSK 732
           FKDKKE  EPEADPERDQRTVFAYQMPLKATE DVY+FFSKAGKVRDVRLIMDRNSRRSK
Sbjct: 114 FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSK 173

Query: 731 GVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQSTAVGGGAGILQGPYGAV 552
           GVGY+EFYDAMSVPMAIALSGH LHGQPVMVKPSEAEKNLVQS A G  +G + GPYGAV
Sbjct: 174 GVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAV 233

Query: 551 ARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKGFGFVQFAQLEHAKAAQ 372
            RKLYVGNLHFNMTE QLRQ+FEPFG VELVQLPLD+ETG CKGFGFVQFA+LEHAKAAQ
Sbjct: 234 DRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQ 293

Query: 371 GLNGKLEIAGRVIKVSAVTDHLGVQN 294
            LNGKL+IAGR+IKVS+VTDH+GVQ+
Sbjct: 294 NLNGKLDIAGRIIKVSSVTDHIGVQD 319


>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score =  360 bits (925), Expect = 3e-97
 Identities = 179/206 (86%), Positives = 191/206 (92%)
 Frame = -1

Query: 911 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGKVRDVRLIMDRNSRRSK 732
           FKDKKE  EPEADPERDQRTVFAYQMPLKATE DVY+FFSKAGKVRDVRLIMDRNSRRSK
Sbjct: 152 FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSK 211

Query: 731 GVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQSTAVGGGAGILQGPYGAV 552
           GVGY+EFYDAMSVPMAIALSGH LHGQPVMVKPSEAEKNLVQS A G  +G + GPYGAV
Sbjct: 212 GVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAV 271

Query: 551 ARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKGFGFVQFAQLEHAKAAQ 372
            RKLYVGNLHFNMTE QLRQ+FEPFG VELVQLPLD+ETG CKGFGFVQFA+LEHAKAAQ
Sbjct: 272 DRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQ 331

Query: 371 GLNGKLEIAGRVIKVSAVTDHLGVQN 294
            LNGKL+IAGR+IKVS+VTDH+GVQ+
Sbjct: 332 NLNGKLDIAGRIIKVSSVTDHIGVQD 357


>emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
          Length = 461

 Score =  360 bits (925), Expect = 3e-97
 Identities = 179/206 (86%), Positives = 191/206 (92%)
 Frame = -1

Query: 911 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGKVRDVRLIMDRNSRRSK 732
           FKDKKE  EPEADPERDQRTVFAYQMPLKATE DVY+FFSKAGKVRDVRLIMDRNSRRSK
Sbjct: 78  FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSK 137

Query: 731 GVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQSTAVGGGAGILQGPYGAV 552
           GVGY+EFYDAMSVPMAIALSGH LHGQPVMVKPSEAEKNLVQS A G  +G + GPYGAV
Sbjct: 138 GVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAV 197

Query: 551 ARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKGFGFVQFAQLEHAKAAQ 372
            RKLYVGNLHFNMTE QLRQ+FEPFG VELVQLPLD+ETG CKGFGFVQFA+LEHAKAAQ
Sbjct: 198 DRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQ 257

Query: 371 GLNGKLEIAGRVIKVSAVTDHLGVQN 294
            LNGKL+IAGR+IKVS+VTDH+GVQ+
Sbjct: 258 NLNGKLDIAGRIIKVSSVTDHIGVQD 283


>ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 550

 Score =  350 bits (899), Expect = 3e-94
 Identities = 176/206 (85%), Positives = 186/206 (90%)
 Frame = -1

Query: 911 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGKVRDVRLIMDRNSRRSK 732
           F+DKKE AEPEADPERDQRTVFAYQMPLKATE DVY+FFSKAGKVRDVRLIMDRNSRRSK
Sbjct: 173 FRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSK 232

Query: 731 GVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQSTAVGGGAGILQGPYGAV 552
           GVGY+EFYDAMSVPMAIALSG  L GQPVMVKPSEAEKNLVQS A GG AG+  GPYGAV
Sbjct: 233 GVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGV-TGPYGAV 291

Query: 551 ARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKGFGFVQFAQLEHAKAAQ 372
            RKLYVGNLHFNMTE QLR++FEPFGPVE+VQLPLD+ETG CKGFGFVQF  LEHAKAAQ
Sbjct: 292 DRKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFTHLEHAKAAQ 351

Query: 371 GLNGKLEIAGRVIKVSAVTDHLGVQN 294
            LNGKLEIAGR IKVS VTDH+  Q+
Sbjct: 352 SLNGKLEIAGRTIKVSCVTDHVASQD 377


>ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
          Length = 549

 Score =  350 bits (899), Expect = 3e-94
 Identities = 175/206 (84%), Positives = 188/206 (91%)
 Frame = -1

Query: 911 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGKVRDVRLIMDRNSRRSK 732
           F+DKKE AEPEADPERDQRTVFAYQMPLKA+E D Y+FFSKAGKVRDVRLIMDRNSRRSK
Sbjct: 164 FRDKKEAAEPEADPERDQRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSK 223

Query: 731 GVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQSTAVGGGAGILQGPYGAV 552
           GVGY+EFYDAMSVPMAIALSG  L GQPVMVKPSEAEKNLVQS A  G AG++ GPYGAV
Sbjct: 224 GVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVV-GPYGAV 282

Query: 551 ARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKGFGFVQFAQLEHAKAAQ 372
            RKLYVGNLHFNMTE QLR++FEPFGPVE+VQLPLD+ETG CKGFGFVQFA LEHAKAAQ
Sbjct: 283 DRKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFAHLEHAKAAQ 342

Query: 371 GLNGKLEIAGRVIKVSAVTDHLGVQN 294
            LNGKLEIAGR IKVS+VTDH+G Q+
Sbjct: 343 SLNGKLEIAGRTIKVSSVTDHVGNQD 368


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