BLASTX nr result

ID: Coptis25_contig00012825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012825
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316595.1| predicted protein [Populus trichocarpa] gi|1...   217   2e-54
ref|XP_002518402.1| Brain protein, putative [Ricinus communis] g...   210   2e-52
ref|NP_193962.1| uncharacterized protein [Arabidopsis thaliana] ...   209   3e-52
ref|XP_002869829.1| hypothetical protein ARALYDRAFT_492636 [Arab...   207   9e-52
ref|NP_001238619.1| uncharacterized protein LOC100306167 [Glycin...   205   6e-51

>ref|XP_002316595.1| predicted protein [Populus trichocarpa] gi|118483180|gb|ABK93494.1|
           unknown [Populus trichocarpa]
           gi|222859660|gb|EEE97207.1| predicted protein [Populus
           trichocarpa]
          Length = 108

 Score =  217 bits (552), Expect = 2e-54
 Identities = 102/108 (94%), Positives = 104/108 (96%)
 Frame = +2

Query: 80  MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 259
           MATSKL ALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 260 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDAEEAVAKE 403
           SRYSTVITPKNWNLFSVNVAMA TGIYQLSRKI+HDYFS+ E AVAKE
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKIQHDYFSEEEAAVAKE 108


>ref|XP_002518402.1| Brain protein, putative [Ricinus communis]
           gi|223542247|gb|EEF43789.1| Brain protein, putative
           [Ricinus communis]
          Length = 108

 Score =  210 bits (534), Expect = 2e-52
 Identities = 97/108 (89%), Positives = 102/108 (94%)
 Frame = +2

Query: 80  MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 259
           MATSKL ALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTATGLIW 60

Query: 260 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDAEEAVAKE 403
           SRYSTVITPKNWNLFSVNVAMA TG+YQLSRK++HDYFS+AE A  KE
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAATGLYQLSRKVQHDYFSEAEAAAVKE 108


>ref|NP_193962.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11762164|gb|AAG40360.1|AF325008_1 AT4g22310
           [Arabidopsis thaliana] gi|2832681|emb|CAA16781.1|
           putative protein [Arabidopsis thaliana]
           gi|7269077|emb|CAB79186.1| putative protein [Arabidopsis
           thaliana] gi|14532636|gb|AAK64046.1| unknown protein
           [Arabidopsis thaliana] gi|19310765|gb|AAL85113.1|
           unknown protein [Arabidopsis thaliana]
           gi|332659191|gb|AEE84591.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 108

 Score =  209 bits (532), Expect = 3e-52
 Identities = 97/108 (89%), Positives = 102/108 (94%)
 Frame = +2

Query: 80  MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 259
           MATSKL A+WNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 260 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDAEEAVAKE 403
           SRYS VI PKNWNLFSVNVAMAGTGIYQL+RKI+HDY ++AE AVA E
Sbjct: 61  SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108


>ref|XP_002869829.1| hypothetical protein ARALYDRAFT_492636 [Arabidopsis lyrata subsp.
           lyrata] gi|297315665|gb|EFH46088.1| hypothetical protein
           ARALYDRAFT_492636 [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score =  207 bits (528), Expect = 9e-52
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = +2

Query: 80  MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 259
           MATSKL A+WNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 260 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDAEEAVAKE 403
           SRYS VI PKNWNLFSVNVAMAGTGIYQL+RKI+HD+ ++AE AVA E
Sbjct: 61  SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDFATEAEPAVANE 108


>ref|NP_001238619.1| uncharacterized protein LOC100306167 [Glycine max]
           gi|255627751|gb|ACU14220.1| unknown [Glycine max]
          Length = 109

 Score =  205 bits (521), Expect = 6e-51
 Identities = 96/109 (88%), Positives = 103/109 (94%), Gaps = 1/109 (0%)
 Frame = +2

Query: 80  MATSKLHALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 259
           MA +KL ALWNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 260 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIRHDYFSDAE-EAVAKE 403
           SRYSTVITPKNWNLFSVN+AMAGTGIYQLSRK+RHDY S+AE +AV KE
Sbjct: 61  SRYSTVITPKNWNLFSVNIAMAGTGIYQLSRKLRHDYSSEAEVKAVTKE 109


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