BLASTX nr result

ID: Coptis25_contig00012816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012816
         (1392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525902.1| l-lactate dehydrogenase, putative [Ricinus c...   588   e-165
ref|XP_002303510.1| predicted protein [Populus trichocarpa] gi|2...   579   e-163
gb|ADM88555.1| lactate dehydrogenase [Camellia sinensis]              579   e-163
ref|XP_002271251.1| PREDICTED: L-lactate dehydrogenase A [Vitis ...   578   e-163
emb|CAN75749.1| hypothetical protein VITISV_032950 [Vitis vinifera]   578   e-162

>ref|XP_002525902.1| l-lactate dehydrogenase, putative [Ricinus communis]
            gi|223534816|gb|EEF36506.1| l-lactate dehydrogenase,
            putative [Ricinus communis]
          Length = 350

 Score =  588 bits (1516), Expect = e-165
 Identities = 295/340 (86%), Positives = 318/340 (93%)
 Frame = +2

Query: 146  GPEGLNMAQSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQDLTDILALVDA 325
            GP GL+++Q FFKPI  TS PS   R TKISVIGTGNVGMAIAQTILTQDL D LALVD 
Sbjct: 11   GPGGLDLSQVFFKPIHNTSPPSPTKRHTKISVIGTGNVGMAIAQTILTQDLADELALVDV 70

Query: 326  KPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISGESRLNLLQRN 505
             P KLRGEMLDLQHAAAFLPRTKILAS DYSVT GSDLCIVTAGARQI GESRLNLLQRN
Sbjct: 71   NPNKLRGEMLDLQHAAAFLPRTKILASPDYSVTIGSDLCIVTAGARQIPGESRLNLLQRN 130

Query: 506  LTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGTNLDSSRFRFL 685
            +TLF+++IPPLAKYSPDSIL+IVSNPVD+LT++AWKLSGFP+NRV+GSGTNLDSSRFRFL
Sbjct: 131  VTLFKNIIPPLAKYSPDSILMIVSNPVDILTFIAWKLSGFPSNRVVGSGTNLDSSRFRFL 190

Query: 686  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYEKETLENIHKA 865
            IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVP+LSFLEKQ I YEKETLENIHKA
Sbjct: 191  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLEKQDIAYEKETLENIHKA 250

Query: 866  VVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGIDEGEVFLSLP 1045
            VV+SAYEVISLKGYTSWAIGYS ANLAR+LLRDQRKIHPVS+LAKGFYGID G+VFLSLP
Sbjct: 251  VVDSAYEVISLKGYTSWAIGYSAANLARSLLRDQRKIHPVSVLAKGFYGIDGGDVFLSLP 310

Query: 1046 AQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 1165
            AQLGRGGV+G+TNVHLT+EEAQ+LRDSAKT+ EVQSQLGI
Sbjct: 311  AQLGRGGVLGVTNVHLTEEEAQRLRDSAKTLLEVQSQLGI 350


>ref|XP_002303510.1| predicted protein [Populus trichocarpa] gi|222840942|gb|EEE78489.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  579 bits (1493), Expect = e-163
 Identities = 291/340 (85%), Positives = 317/340 (93%)
 Frame = +2

Query: 146  GPEGLNMAQSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQDLTDILALVDA 325
            GP GL+++  FFKPIQ TS PS   RQTKISVIG GNVGMAIAQTILTQDL D +ALVDA
Sbjct: 11   GPGGLDLSDMFFKPIQNTSPPSPTKRQTKISVIGAGNVGMAIAQTILTQDLADEIALVDA 70

Query: 326  KPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISGESRLNLLQRN 505
            +PEKLRGEMLDLQHAAAFLPRTKI+AS DY VT GSDLCIVTAGARQI+GESRLNLLQRN
Sbjct: 71   QPEKLRGEMLDLQHAAAFLPRTKIIASTDYLVTVGSDLCIVTAGARQIAGESRLNLLQRN 130

Query: 506  LTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGTNLDSSRFRFL 685
            + LFR +IPPLAKYSP +IL+IVSNPVDVLTYVAWKLSGFP+NRV+GSGTNLDSSRFRFL
Sbjct: 131  VALFRGIIPPLAKYSPGTILMIVSNPVDVLTYVAWKLSGFPSNRVVGSGTNLDSSRFRFL 190

Query: 686  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYEKETLENIHKA 865
            IADHLDVNAQDVQA I+GEHGDSSVALWSSISVGGVPVLSFLEKQQI YEKETLE IHKA
Sbjct: 191  IADHLDVNAQDVQASIIGEHGDSSVALWSSISVGGVPVLSFLEKQQIPYEKETLEGIHKA 250

Query: 866  VVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGIDEGEVFLSLP 1045
            VV+SAYEVISLKGYTSWAIGYS ANLAR++LRDQRKIHPVS+LAKGFYGID+G+VFLSLP
Sbjct: 251  VVDSAYEVISLKGYTSWAIGYSAANLARSILRDQRKIHPVSVLAKGFYGIDDGDVFLSLP 310

Query: 1046 AQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 1165
            AQLGRGGV+G+TNVHLTDEEAQ+LR SA+TI +VQSQLG+
Sbjct: 311  AQLGRGGVLGVTNVHLTDEEAQRLRKSAQTILKVQSQLGL 350


>gb|ADM88555.1| lactate dehydrogenase [Camellia sinensis]
          Length = 350

 Score =  579 bits (1492), Expect = e-163
 Identities = 292/340 (85%), Positives = 317/340 (93%)
 Frame = +2

Query: 146  GPEGLNMAQSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQDLTDILALVDA 325
            GP GL++AQ+FFKPIQ  + PS  NR TKISVIGTGNVGMAIAQTILTQDL D LALVDA
Sbjct: 11   GPGGLDIAQAFFKPIQNMAPPSPTNRHTKISVIGTGNVGMAIAQTILTQDLADELALVDA 70

Query: 326  KPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISGESRLNLLQRN 505
             P KLRGEMLDLQHAAAFLPRTKILASVDYSVT GSDLCIVTAGARQ  GESRLNLLQRN
Sbjct: 71   IPNKLRGEMLDLQHAAAFLPRTKILASVDYSVTAGSDLCIVTAGARQNPGESRLNLLQRN 130

Query: 506  LTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGTNLDSSRFRFL 685
            + LF  ++PPLAK+SP++IL+IVSNPVDVLTYVAWKLSGFP+NRVIGSGTNLDSSRFRFL
Sbjct: 131  VALFSKIVPPLAKHSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFL 190

Query: 686  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYEKETLENIHKA 865
            IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLE+QQI YEKETLE IHK 
Sbjct: 191  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLERQQIAYEKETLEKIHKE 250

Query: 866  VVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGIDEGEVFLSLP 1045
            VVESAYEVISLKGYTSWAIGYSVANLART+LRDQR+IHPVS++AKGFYGI +G+VFLSLP
Sbjct: 251  VVESAYEVISLKGYTSWAIGYSVANLARTILRDQRRIHPVSVIAKGFYGIADGDVFLSLP 310

Query: 1046 AQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 1165
            AQLGR GV+G+TNVHLT+EEA+KLRDSAKTI EVQ+QLG+
Sbjct: 311  AQLGRSGVLGVTNVHLTEEEARKLRDSAKTILEVQNQLGV 350


>ref|XP_002271251.1| PREDICTED: L-lactate dehydrogenase A [Vitis vinifera]
            gi|297741178|emb|CBI31909.3| unnamed protein product
            [Vitis vinifera]
          Length = 350

 Score =  578 bits (1491), Expect = e-163
 Identities = 286/340 (84%), Positives = 319/340 (93%)
 Frame = +2

Query: 146  GPEGLNMAQSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQDLTDILALVDA 325
            GP GL++ Q+FFKPIQQT+ PS   R TK+SVIG GNVGMAIAQTILTQDL D LALVD 
Sbjct: 11   GPGGLDLTQAFFKPIQQTAPPSPTKRHTKVSVIGVGNVGMAIAQTILTQDLVDELALVDV 70

Query: 326  KPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISGESRLNLLQRN 505
              +KLRGEMLDLQHAAAFLPRTKI ASVDY++T GSDLCIVTAGARQI+GESRLNLLQRN
Sbjct: 71   NADKLRGEMLDLQHAAAFLPRTKIHASVDYAITAGSDLCIVTAGARQIAGESRLNLLQRN 130

Query: 506  LTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGTNLDSSRFRFL 685
            ++LF  ++PPLAKYSPDSIL+IVSNPVD+LTYVAWKLSGFP+NRV+GSGTNLDSSRFRFL
Sbjct: 131  VSLFSRIVPPLAKYSPDSILLIVSNPVDILTYVAWKLSGFPSNRVLGSGTNLDSSRFRFL 190

Query: 686  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYEKETLENIHKA 865
            IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQI YEKETLENIHKA
Sbjct: 191  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIAYEKETLENIHKA 250

Query: 866  VVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGIDEGEVFLSLP 1045
            V++SAYEVISLKGYTSWAIGYS A+LAR++LR+QR+IHPVS+LAKGFYGI+ G+VFLSLP
Sbjct: 251  VIDSAYEVISLKGYTSWAIGYSAASLARSILRNQRRIHPVSVLAKGFYGIEGGDVFLSLP 310

Query: 1046 AQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 1165
            AQLGRGG++G+TNVHLTDEEAQ+LRDSAKTI EVQ+QLG+
Sbjct: 311  AQLGRGGILGVTNVHLTDEEAQRLRDSAKTILEVQNQLGL 350


>emb|CAN75749.1| hypothetical protein VITISV_032950 [Vitis vinifera]
          Length = 350

 Score =  578 bits (1489), Expect = e-162
 Identities = 286/340 (84%), Positives = 318/340 (93%)
 Frame = +2

Query: 146  GPEGLNMAQSFFKPIQQTSSPSSNNRQTKISVIGTGNVGMAIAQTILTQDLTDILALVDA 325
            GP GL++ Q+FFKPIQQT+ PS   R TK+SVIG GNVGMAIAQTILTQDL D LALVD 
Sbjct: 11   GPGGLDLTQAFFKPIQQTAPPSPTKRHTKVSVIGVGNVGMAIAQTILTQDLVDELALVDV 70

Query: 326  KPEKLRGEMLDLQHAAAFLPRTKILASVDYSVTEGSDLCIVTAGARQISGESRLNLLQRN 505
               KLRGEMLDLQHAAAFLPRTKI ASVDY++T GSDLCIVTAGARQI+GESRLNLLQRN
Sbjct: 71   NANKLRGEMLDLQHAAAFLPRTKIHASVDYAITXGSDLCIVTAGARQIAGESRLNLLQRN 130

Query: 506  LTLFRDVIPPLAKYSPDSILVIVSNPVDVLTYVAWKLSGFPANRVIGSGTNLDSSRFRFL 685
            ++LF  ++PPLAKYSPDSIL+IVSNPVD+LTYVAWKLSGFP+NRV+GSGTNLDSSRFRFL
Sbjct: 131  VSLFSRIVPPLAKYSPDSILLIVSNPVDILTYVAWKLSGFPSNRVLGSGTNLDSSRFRFL 190

Query: 686  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYEKETLENIHKA 865
            IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQI YEKETLENIHKA
Sbjct: 191  IADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIAYEKETLENIHKA 250

Query: 866  VVESAYEVISLKGYTSWAIGYSVANLARTLLRDQRKIHPVSILAKGFYGIDEGEVFLSLP 1045
            V++SAYEVISLKGYTSWAIGYS A+LAR++LR+QR+IHPVS+LAKGFYGI+ G+VFLSLP
Sbjct: 251  VIDSAYEVISLKGYTSWAIGYSAASLARSILRNQRRIHPVSVLAKGFYGIEGGDVFLSLP 310

Query: 1046 AQLGRGGVIGITNVHLTDEEAQKLRDSAKTIAEVQSQLGI 1165
            AQLGRGG++G+TNVHLTDEEAQ+LRDSAKTI EVQ+QLG+
Sbjct: 311  AQLGRGGILGVTNVHLTDEEAQRLRDSAKTILEVQNQLGL 350


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