BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012809
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31225.3| unnamed protein product [Vitis vinifera]              506   e-141
ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltra...   506   e-141
ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable pol...   501   e-139
ref|XP_004136660.1| PREDICTED: probable polyribonucleotide nucle...   501   e-139
ref|XP_002525684.1| polyribonucleotide nucleotidyltransferase, p...   498   e-139

>emb|CBI31225.3| unnamed protein product [Vitis vinifera]
          Length = 942

 Score =  506 bits (1304), Expect = e-141
 Identities = 256/323 (79%), Positives = 288/323 (89%), Gaps = 1/323 (0%)
 Frame = -2

Query: 1006 IRALKQPKV-DLETVNNEAVDGVLSQQPYSIKIPVGDRHILVETGLIGRQASGSVTVTDG 830
            +RAL + +  ++   + EA  GV   QP+S+KIPVGDRHILVETG IGRQASGSVTVTDG
Sbjct: 52   VRALAESQASEINPSSVEAPPGVA--QPFSVKIPVGDRHILVETGHIGRQASGSVTVTDG 109

Query: 829  ETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAGRTSGGFFKREGRAKDNEVLTCRLID 650
            ETIVYTSVCLADVPSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGR KD+EVL CRLID
Sbjct: 110  ETIVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRTKDHEVLICRLID 169

Query: 649  RPLRPTMMKGFYHETQVLSWVLSYDGLHSPDSLAITAAGIAMALSEVPSTKTIAGVRIGL 470
            RPLRPTM+KGFYHETQ+LSWVLSYDGLHSPDSLA+TAAGIA+ALSE+P +K +AGVR+G+
Sbjct: 170  RPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPISKAVAGVRVGM 229

Query: 469  VGDKFIVNPTTKEMESSELDLLLAGTDSAILMIEGYCDFLPEEKLLQAVEVGHNAVQAIC 290
            VG+KFI+NPTTKEME SELDLL+AGTDSAILMIEGYC+FLPEEKLLQAVEVG +AV+AIC
Sbjct: 230  VGNKFIINPTTKEMEDSELDLLVAGTDSAILMIEGYCNFLPEEKLLQAVEVGQDAVRAIC 289

Query: 289  KEVDGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGADLVKALQIRNKIPRRKALSMLEDK 110
             EV+ L KK GKPKML+AIKLPPPELYRHVEEIAG  L K LQIRNKIPRRKAL  LE++
Sbjct: 290  NEVEALAKKYGKPKMLDAIKLPPPELYRHVEEIAGQQLGKVLQIRNKIPRRKALISLEEE 349

Query: 109  VIIILTEQGYVSKDETSVAAELL 41
            V+ ILTE+GYVSKDET   AE +
Sbjct: 350  VLTILTEEGYVSKDETLGTAETI 372


>ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltransferase [Vitis vinifera]
          Length = 946

 Score =  506 bits (1304), Expect = e-141
 Identities = 256/323 (79%), Positives = 288/323 (89%), Gaps = 1/323 (0%)
 Frame = -2

Query: 1006 IRALKQPKV-DLETVNNEAVDGVLSQQPYSIKIPVGDRHILVETGLIGRQASGSVTVTDG 830
            +RAL + +  ++   + EA  GV   QP+S+KIPVGDRHILVETG IGRQASGSVTVTDG
Sbjct: 52   VRALAESQASEINPSSVEAPPGVA--QPFSVKIPVGDRHILVETGHIGRQASGSVTVTDG 109

Query: 829  ETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAGRTSGGFFKREGRAKDNEVLTCRLID 650
            ETIVYTSVCLADVPSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGR KD+EVL CRLID
Sbjct: 110  ETIVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRTKDHEVLICRLID 169

Query: 649  RPLRPTMMKGFYHETQVLSWVLSYDGLHSPDSLAITAAGIAMALSEVPSTKTIAGVRIGL 470
            RPLRPTM+KGFYHETQ+LSWVLSYDGLHSPDSLA+TAAGIA+ALSE+P +K +AGVR+G+
Sbjct: 170  RPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPISKAVAGVRVGM 229

Query: 469  VGDKFIVNPTTKEMESSELDLLLAGTDSAILMIEGYCDFLPEEKLLQAVEVGHNAVQAIC 290
            VG+KFI+NPTTKEME SELDLL+AGTDSAILMIEGYC+FLPEEKLLQAVEVG +AV+AIC
Sbjct: 230  VGNKFIINPTTKEMEDSELDLLVAGTDSAILMIEGYCNFLPEEKLLQAVEVGQDAVRAIC 289

Query: 289  KEVDGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGADLVKALQIRNKIPRRKALSMLEDK 110
             EV+ L KK GKPKML+AIKLPPPELYRHVEEIAG  L K LQIRNKIPRRKAL  LE++
Sbjct: 290  NEVEALAKKYGKPKMLDAIKLPPPELYRHVEEIAGQQLGKVLQIRNKIPRRKALISLEEE 349

Query: 109  VIIILTEQGYVSKDETSVAAELL 41
            V+ ILTE+GYVSKDET   AE +
Sbjct: 350  VLTILTEEGYVSKDETLGTAETI 372


>ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable polyribonucleotide
            nucleotidyltransferase 1, chloroplastic-like [Cucumis
            sativus]
          Length = 922

 Score =  501 bits (1290), Expect = e-139
 Identities = 257/349 (73%), Positives = 294/349 (84%)
 Frame = -2

Query: 1084 TKNNFFSFHTFQKSKISYIPSKKFRVIRALKQPKVDLETVNNEAVDGVLSQQPYSIKIPV 905
            TK+NF S    +  K     S K  V +AL +  V      ++   G L  +P+S+KIPV
Sbjct: 41   TKSNFSSLSLLRSKK-----SAKRLVTKALSESSVPDSVAASDEAPGSL--RPFSVKIPV 93

Query: 904  GDRHILVETGLIGRQASGSVTVTDGETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAG 725
            GDRHILVETG IGRQAS +VTVTDGETIVYT+VCLAD PSEPSDFFPL+VNYQERFSAAG
Sbjct: 94   GDRHILVETGHIGRQASSAVTVTDGETIVYTTVCLADTPSEPSDFFPLSVNYQERFSAAG 153

Query: 724  RTSGGFFKREGRAKDNEVLTCRLIDRPLRPTMMKGFYHETQVLSWVLSYDGLHSPDSLAI 545
            RTSGGFFKREGRA+D+EVL CRLIDRP+RPTM+KGFYHETQ+LSWVLSYDGLH+PD LAI
Sbjct: 154  RTSGGFFKREGRARDHEVLICRLIDRPIRPTMLKGFYHETQILSWVLSYDGLHTPDCLAI 213

Query: 544  TAAGIAMALSEVPSTKTIAGVRIGLVGDKFIVNPTTKEMESSELDLLLAGTDSAILMIEG 365
            TAAGIA+ALSEVP+++ +AGVRIGLVGDKFIVNPTTKEME+SELDL+LAGTDSAILMIEG
Sbjct: 214  TAAGIAVALSEVPNSQAVAGVRIGLVGDKFIVNPTTKEMENSELDLVLAGTDSAILMIEG 273

Query: 364  YCDFLPEEKLLQAVEVGHNAVQAICKEVDGLVKKCGKPKMLEAIKLPPPELYRHVEEIAG 185
            YC+FL EE LLQA+E+G NAV AICKEVD LV++ GKPKML+AI+LPPP LY+HVEEIAG
Sbjct: 274  YCNFLSEEMLLQAIEIGQNAVTAICKEVDSLVRERGKPKMLDAIRLPPPLLYKHVEEIAG 333

Query: 184  ADLVKALQIRNKIPRRKALSMLEDKVIIILTEQGYVSKDETSVAAELLP 38
             +L K LQIRNKIPRRKALS LE+KVI ILTE+GYVS D TS   E +P
Sbjct: 334  NELEKVLQIRNKIPRRKALSSLEEKVITILTEEGYVSLDTTSGGLEPIP 382


>ref|XP_004136660.1| PREDICTED: probable polyribonucleotide nucleotidyltransferase 1,
            chloroplastic-like [Cucumis sativus]
          Length = 922

 Score =  501 bits (1290), Expect = e-139
 Identities = 257/349 (73%), Positives = 294/349 (84%)
 Frame = -2

Query: 1084 TKNNFFSFHTFQKSKISYIPSKKFRVIRALKQPKVDLETVNNEAVDGVLSQQPYSIKIPV 905
            TK+NF S    +  K     S K  V +AL +  V      ++   G L  +P+S+KIPV
Sbjct: 41   TKSNFSSLSLLRSKK-----SAKRLVTKALSESSVPDSVAASDEAPGSL--RPFSVKIPV 93

Query: 904  GDRHILVETGLIGRQASGSVTVTDGETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAG 725
            GDRHILVETG IGRQAS +VTVTDGETIVYT+VCLAD PSEPSDFFPL+VNYQERFSAAG
Sbjct: 94   GDRHILVETGHIGRQASSAVTVTDGETIVYTTVCLADTPSEPSDFFPLSVNYQERFSAAG 153

Query: 724  RTSGGFFKREGRAKDNEVLTCRLIDRPLRPTMMKGFYHETQVLSWVLSYDGLHSPDSLAI 545
            RTSGGFFKREGRA+D+EVL CRLIDRP+RPTM+KGFYHETQ+LSWVLSYDGLH+PD LAI
Sbjct: 154  RTSGGFFKREGRARDHEVLICRLIDRPIRPTMLKGFYHETQILSWVLSYDGLHTPDCLAI 213

Query: 544  TAAGIAMALSEVPSTKTIAGVRIGLVGDKFIVNPTTKEMESSELDLLLAGTDSAILMIEG 365
            TAAGIA+ALSEVP+++ +AGVRIGLVGDKFIVNPTTKEME+SELDL+LAGTDSAILMIEG
Sbjct: 214  TAAGIAVALSEVPNSQAVAGVRIGLVGDKFIVNPTTKEMENSELDLVLAGTDSAILMIEG 273

Query: 364  YCDFLPEEKLLQAVEVGHNAVQAICKEVDGLVKKCGKPKMLEAIKLPPPELYRHVEEIAG 185
            YC+FL EE LLQA+E+G NAV AICKEVD LV++ GKPKML+AI+LPPP LY+HVEEIAG
Sbjct: 274  YCNFLSEEMLLQAIEIGQNAVTAICKEVDSLVRERGKPKMLDAIRLPPPLLYKHVEEIAG 333

Query: 184  ADLVKALQIRNKIPRRKALSMLEDKVIIILTEQGYVSKDETSVAAELLP 38
             +L K LQIRNKIPRRKALS LE+KVI ILTE+GYVS D TS   E +P
Sbjct: 334  NELEKVLQIRNKIPRRKALSSLEEKVITILTEEGYVSLDTTSGGLEPIP 382


>ref|XP_002525684.1| polyribonucleotide nucleotidyltransferase, putative [Ricinus
            communis] gi|223534984|gb|EEF36667.1| polyribonucleotide
            nucleotidyltransferase, putative [Ricinus communis]
          Length = 948

 Score =  498 bits (1283), Expect = e-139
 Identities = 266/385 (69%), Positives = 306/385 (79%), Gaps = 7/385 (1%)
 Frame = -2

Query: 1174 SLNTLSLKMLTTPSFNATYSPPTPLLNSLRTKNNFFSFHTFQKSKISYIPSKKFRVI--R 1001
            SL+T+     T+PSF+ + +    L  S        S  +   S    +P K+      R
Sbjct: 9    SLHTIPYHPQTSPSFSNSITTRCKLFLSPNCPRFIHSSFSKFPSLSLLLPCKRGERFSAR 68

Query: 1000 ALKQPKVDLETVNNEAVDGV-LSQQPYSIKIPVGDRHILVETGLIGRQASGSVTVTDGET 824
            AL+ P++    +    VDG     Q  S+KIP GDRHILVETG  GRQASGSV VTDGET
Sbjct: 69   ALEDPEITESVI----VDGPQFFPQAVSVKIPFGDRHILVETGHTGRQASGSVMVTDGET 124

Query: 823  IVYTSVCLADVPSEPSDFFPLTVNYQERFSAAGRTSGGFFKREGRAKDNEVLTCRLIDRP 644
            IVYT+VCL DVPSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGRAKD+EVL CRLIDRP
Sbjct: 125  IVYTTVCLDDVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRP 184

Query: 643  LRPTMMKGFYHETQVLSWVLSYDGLHSPDSLAITAAGIAMALSEVPSTKTIAGVRIGLVG 464
            LRPTM+KGFYHETQ+LSWVLSYDGLHS D+LA+TAAGIA+ALSEVP+TK IAGVR+GLVG
Sbjct: 185  LRPTMLKGFYHETQILSWVLSYDGLHSSDALAVTAAGIAVALSEVPTTKAIAGVRVGLVG 244

Query: 463  DKFIVNPTTKEMESSELDLLLAGTDSAILMIEGYCDFLPEEKLLQAVEVGHNAVQAICKE 284
            DKFIVNPTTKEME S+LDL++AGTDSAILMIEGYC+FLPEEKLL+AV+VG +AV+AIC E
Sbjct: 245  DKFIVNPTTKEMEESKLDLVMAGTDSAILMIEGYCNFLPEEKLLEAVQVGQDAVRAICNE 304

Query: 283  VDGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGADLVKALQIRNKIPRRKALSMLEDKVI 104
            VD LVKKCGKPKM +AIKLPPPELY+HV+EIAG +LV  LQIRNKIPRRKALS LE+KVI
Sbjct: 305  VDALVKKCGKPKMHDAIKLPPPELYKHVKEIAGDELVNVLQIRNKIPRRKALSSLEEKVI 364

Query: 103  IILTEQGYVSKD----ETSVAAELL 41
             ILTE+G+VSKD     T   A+LL
Sbjct: 365  SILTEEGFVSKDTSFGTTETVADLL 389