BLASTX nr result

ID: Coptis25_contig00012804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012804
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15013.3| unnamed protein product [Vitis vinifera]              224   1e-96
ref|XP_002321607.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-95
ref|XP_002282383.1| PREDICTED: uncharacterized protein LOC100267...   224   1e-95
ref|XP_002318056.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-94
emb|CAN75322.1| hypothetical protein VITISV_003764 [Vitis vinifera]   224   1e-93

>emb|CBI15013.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  224 bits (571), Expect(2) = 1e-96
 Identities = 104/124 (83%), Positives = 117/124 (94%)
 Frame = -3

Query: 755 GVRVQVRSVYIEDRSQPSKGQYFFAYRIRITNNSERPVQLLRRHWIVTDANSRSENVWGI 576
           G+RVQVRSVYIE RSQPSKGQ+FFAYRIRITNNS+RPVQLLRRHWI+TDAN + E+VWGI
Sbjct: 248 GIRVQVRSVYIEGRSQPSKGQFFFAYRIRITNNSDRPVQLLRRHWIITDANGKIEHVWGI 307

Query: 575 GVIGQQPVILPHTGFEYSSACPLSTPSGKMEGDFEMKHTDKIGTSSFNVAIAPFSLSTLA 396
           GVIG+QPVILP TGFEYSSACPLSTP+G+MEGDFEMKH DK+G+ +FNVAIAPFSLSTL 
Sbjct: 308 GVIGEQPVILPRTGFEYSSACPLSTPNGRMEGDFEMKHIDKVGSQTFNVAIAPFSLSTLG 367

Query: 395 DDSD 384
           D+SD
Sbjct: 368 DESD 371



 Score =  156 bits (395), Expect(2) = 1e-96
 Identities = 96/167 (57%), Positives = 111/167 (66%), Gaps = 12/167 (7%)
 Frame = -1

Query: 1276 SIKKSRE-LEMQSLSLKMLTGLNTG-----------ASGGRNFERRRRSCNNNNKIVGCL 1133
            S K SR+  EM +LS K    LN G            +G R      R    N +I  C 
Sbjct: 89   SSKNSRKGREMHALSFKGFPDLNVGRERSWPGRLYHCTGTRKDGWNCRDFRRNCRIFAC- 147

Query: 1132 SSSDRNGVERDKKQNLSTSSFASRTHTYALLKQQMEVAAKSEDYKEAARIRDSLRLFEEE 953
             SS  NG      +N S SSF SR+ TYALLKQQ++VAAKSEDYKEAAR+RDSLRLFEEE
Sbjct: 148  -SSGANG------ENQSPSSFLSRSQTYALLKQQLQVAAKSEDYKEAARLRDSLRLFEEE 200

Query: 952  EPVLRLLKELKEAVADERFEDAVKLRDELKLVAPHALLKCSSDATTL 812
            EPVLRL + +KEAVADERFEDA + RDELK +APH+LLKCSSDATT+
Sbjct: 201  EPVLRLRRLIKEAVADERFEDAARYRDELKEIAPHSLLKCSSDATTV 247


>ref|XP_002321607.1| predicted protein [Populus trichocarpa] gi|222868603|gb|EEF05734.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score =  219 bits (558), Expect(2) = 1e-95
 Identities = 102/124 (82%), Positives = 113/124 (91%)
 Frame = -3

Query: 755 GVRVQVRSVYIEDRSQPSKGQYFFAYRIRITNNSERPVQLLRRHWIVTDANSRSENVWGI 576
           G+RVQVRSVYIE RSQPSKGQYFFAYRIRITNNS+RPVQLLRRHWI+TDAN ++EN WG+
Sbjct: 160 GIRVQVRSVYIEGRSQPSKGQYFFAYRIRITNNSDRPVQLLRRHWIITDANGKTENFWGV 219

Query: 575 GVIGQQPVILPHTGFEYSSACPLSTPSGKMEGDFEMKHTDKIGTSSFNVAIAPFSLSTLA 396
           GVIG+QPVILP TGFEYSSACPL TP+G+MEGDFEMKH DK G+ +FNVAIAPFSLS L 
Sbjct: 220 GVIGEQPVILPRTGFEYSSACPLCTPNGRMEGDFEMKHIDKAGSPTFNVAIAPFSLSILG 279

Query: 395 DDSD 384
           D SD
Sbjct: 280 DGSD 283



 Score =  158 bits (400), Expect(2) = 1e-95
 Identities = 94/159 (59%), Positives = 110/159 (69%), Gaps = 13/159 (8%)
 Frame = -1

Query: 1249 MQSLSLKMLTGLNTGASG---GRNFERRRRSCNN------NNKIVGCLSSSDRNGVERDK 1097
            MQSL+LK+LT  +TGA     GR+F    R C N      N +IV C    D  G     
Sbjct: 1    MQSLNLKLLTDFSTGARRYVPGRSFGTEWRQCLNLRNYSRNCRIVACSVERDGGGEGASS 60

Query: 1096 KQNLST----SSFASRTHTYALLKQQMEVAAKSEDYKEAARIRDSLRLFEEEEPVLRLLK 929
              + S+    SSF SR+ TYA+LKQQMEVAA+SEDY+EAAR+RDSLR FEE EPVLRL +
Sbjct: 61   SSSSSSDPSPSSFLSRSQTYAMLKQQMEVAAQSEDYEEAARLRDSLRSFEEVEPVLRLRR 120

Query: 928  ELKEAVADERFEDAVKLRDELKLVAPHALLKCSSDATTL 812
             LKEAVADERFEDA + RDELK +AP +LLKCSSDATTL
Sbjct: 121  LLKEAVADERFEDATRYRDELKEIAPLSLLKCSSDATTL 159


>ref|XP_002282383.1| PREDICTED: uncharacterized protein LOC100267315 [Vitis vinifera]
          Length = 277

 Score =  224 bits (571), Expect(2) = 1e-95
 Identities = 104/124 (83%), Positives = 117/124 (94%)
 Frame = -3

Query: 755 GVRVQVRSVYIEDRSQPSKGQYFFAYRIRITNNSERPVQLLRRHWIVTDANSRSENVWGI 576
           G+RVQVRSVYIE RSQPSKGQ+FFAYRIRITNNS+RPVQLLRRHWI+TDAN + E+VWGI
Sbjct: 150 GIRVQVRSVYIEGRSQPSKGQFFFAYRIRITNNSDRPVQLLRRHWIITDANGKIEHVWGI 209

Query: 575 GVIGQQPVILPHTGFEYSSACPLSTPSGKMEGDFEMKHTDKIGTSSFNVAIAPFSLSTLA 396
           GVIG+QPVILP TGFEYSSACPLSTP+G+MEGDFEMKH DK+G+ +FNVAIAPFSLSTL 
Sbjct: 210 GVIGEQPVILPRTGFEYSSACPLSTPNGRMEGDFEMKHIDKVGSQTFNVAIAPFSLSTLG 269

Query: 395 DDSD 384
           D+SD
Sbjct: 270 DESD 273



 Score =  153 bits (387), Expect(2) = 1e-95
 Identities = 91/157 (57%), Positives = 105/157 (66%), Gaps = 11/157 (7%)
 Frame = -1

Query: 1249 MQSLSLKMLTGLNTG-----------ASGGRNFERRRRSCNNNNKIVGCLSSSDRNGVER 1103
            M +LS K    LN G            +G R      R    N +I  C  SS  NG   
Sbjct: 1    MHALSFKGFPDLNVGRERSWPGRLYHCTGTRKDGWNCRDFRRNCRIFAC--SSGANG--- 55

Query: 1102 DKKQNLSTSSFASRTHTYALLKQQMEVAAKSEDYKEAARIRDSLRLFEEEEPVLRLLKEL 923
               +N S SSF SR+ TYALLKQQ++VAAKSEDYKEAAR+RDSLRLFEEEEPVLRL + +
Sbjct: 56   ---ENQSPSSFLSRSQTYALLKQQLQVAAKSEDYKEAARLRDSLRLFEEEEPVLRLRRLI 112

Query: 922  KEAVADERFEDAVKLRDELKLVAPHALLKCSSDATTL 812
            KEAVADERFEDA + RDELK +APH+LLKCSSDATT+
Sbjct: 113  KEAVADERFEDAARYRDELKEIAPHSLLKCSSDATTV 149


>ref|XP_002318056.1| predicted protein [Populus trichocarpa] gi|222858729|gb|EEE96276.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score =  213 bits (541), Expect(2) = 2e-94
 Identities = 99/124 (79%), Positives = 111/124 (89%)
 Frame = -3

Query: 755 GVRVQVRSVYIEDRSQPSKGQYFFAYRIRITNNSERPVQLLRRHWIVTDANSRSENVWGI 576
           G+R QVRS+YIE RSQPSKGQYFFAYRIRITNNS+RPVQLLRRHWI+TDA  ++ENVWG+
Sbjct: 158 GIRNQVRSLYIEGRSQPSKGQYFFAYRIRITNNSDRPVQLLRRHWIITDAKGKTENVWGV 217

Query: 575 GVIGQQPVILPHTGFEYSSACPLSTPSGKMEGDFEMKHTDKIGTSSFNVAIAPFSLSTLA 396
           GVIG+QPVILP T FEYSSACPL TP+G+MEGDFEMKH DK G+ +FNVAIAPFSLS L 
Sbjct: 218 GVIGEQPVILPRTAFEYSSACPLCTPNGRMEGDFEMKHIDKAGSPAFNVAIAPFSLSILG 277

Query: 395 DDSD 384
           D SD
Sbjct: 278 DGSD 281



 Score =  160 bits (406), Expect(2) = 2e-94
 Identities = 92/157 (58%), Positives = 110/157 (70%), Gaps = 11/157 (7%)
 Frame = -1

Query: 1249 MQSLSLKMLTGLNTGASG---GRNFERRRRSCNN------NNKIVGCLSSSDRNG--VER 1103
            MQSL+L++ T  +TG      GR+F   RR C +      N +IV C    D NG     
Sbjct: 1    MQSLNLRLSTDFSTGTRRFVPGRSFGEERRQCLSFRVSYRNCRIVACSVERDGNGEGTSS 60

Query: 1102 DKKQNLSTSSFASRTHTYALLKQQMEVAAKSEDYKEAARIRDSLRLFEEEEPVLRLLKEL 923
                + S SSF SR+ TYA+LKQQMEVAA+SEDY+EAARIRDSL+ FEEEEPVLRL + L
Sbjct: 61   SSGSDHSPSSFLSRSQTYAMLKQQMEVAAQSEDYEEAARIRDSLKSFEEEEPVLRLHRLL 120

Query: 922  KEAVADERFEDAVKLRDELKLVAPHALLKCSSDATTL 812
            KEAVADE+FEDA + RDELK + PH+LLKCSSDATTL
Sbjct: 121  KEAVADEQFEDAARYRDELKEIVPHSLLKCSSDATTL 157


>emb|CAN75322.1| hypothetical protein VITISV_003764 [Vitis vinifera]
          Length = 223

 Score =  224 bits (571), Expect(2) = 1e-93
 Identities = 104/124 (83%), Positives = 117/124 (94%)
 Frame = -3

Query: 755 GVRVQVRSVYIEDRSQPSKGQYFFAYRIRITNNSERPVQLLRRHWIVTDANSRSENVWGI 576
           G+RVQVRSVYIE RSQPSKGQ+FFAYRIRITNNS+RPVQLLRRHWI+TDAN + E+VWGI
Sbjct: 96  GIRVQVRSVYIEGRSQPSKGQFFFAYRIRITNNSDRPVQLLRRHWIITDANGKIEHVWGI 155

Query: 575 GVIGQQPVILPHTGFEYSSACPLSTPSGKMEGDFEMKHTDKIGTSSFNVAIAPFSLSTLA 396
           GVIG+QPVILP TGFEYSSACPLSTP+G+MEGDFEMKH DK+G+ +FNVAIAPFSLSTL 
Sbjct: 156 GVIGEQPVILPRTGFEYSSACPLSTPNGRMEGDFEMKHIDKVGSQTFNVAIAPFSLSTLG 215

Query: 395 DDSD 384
           D+SD
Sbjct: 216 DESD 219



 Score =  147 bits (370), Expect(2) = 1e-93
 Identities = 74/92 (80%), Positives = 84/92 (91%)
 Frame = -1

Query: 1087 LSTSSFASRTHTYALLKQQMEVAAKSEDYKEAARIRDSLRLFEEEEPVLRLLKELKEAVA 908
            LS SSF SR+ TYALLKQQ++VAAKSEDYKEAAR+RDSLRLFEEEEPVLRL + +KEAVA
Sbjct: 4    LSPSSFLSRSQTYALLKQQLQVAAKSEDYKEAARLRDSLRLFEEEEPVLRLRRLIKEAVA 63

Query: 907  DERFEDAVKLRDELKLVAPHALLKCSSDATTL 812
            DERFEDA + RDELK +APH+LLKCSSDATT+
Sbjct: 64   DERFEDAARYRDELKEIAPHSLLKCSSDATTV 95


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