BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012802
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   343   3e-92
ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   343   4e-92
ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   335   2e-89
ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methy...   318   1e-84
ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferas...   314   3e-83

>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score =  343 bits (881), Expect = 3e-92
 Identities = 172/227 (75%), Positives = 199/227 (87%)
 Frame = +2

Query: 68  APDFYYREAQRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLK 247
           APDF+YREAQRLGY+ARSAFKLLQ+Q +++LITPG+SVLDLGCAPGAWLQVACQSLGPLK
Sbjct: 6   APDFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQSLGPLK 65

Query: 248 KGGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLV 427
            GG VVGIDLKKVKVP  +CD+RV+T CADVM+ P+DQV ALS + KGFSV+LSDMCP V
Sbjct: 66  NGGSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSDMCPPV 125

Query: 428 SGITTKDAALSIELGMRALDLAVGASDVPLPDDDIHEENQSDGSRSGADEKGILLPGGNL 607
           SGITTKDAALS+ELGM+ALD+A+G +    PDD    ENQ+D S SG ++ G+L  GG+L
Sbjct: 126 SGITTKDAALSMELGMQALDIAIGGAASAHPDD----ENQNDDSTSGENDNGVLQAGGHL 181

Query: 608 VIKLLESEDIQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 748
           VIKLLESEDIQEF++ICK  FRKASWLRPKATRSSSREIYLICQGL+
Sbjct: 182 VIKLLESEDIQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGLK 228


>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  343 bits (880), Expect = 4e-92
 Identities = 172/226 (76%), Positives = 191/226 (84%)
 Frame = +2

Query: 71  PDFYYREAQRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLKK 250
           PDF+YREAQRLGY ARSAFKLLQMQ +Y+LI PG+SVLDLGCAPGAWLQVACQSLGPLK 
Sbjct: 7   PDFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLKN 66

Query: 251 GGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVS 430
           GG+VVGIDLKKVKVP++HCDSRV+T CADVM  PKD++ A SP+ KGFSVILSDMCPLVS
Sbjct: 67  GGVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSDMCPLVS 126

Query: 431 GITTKDAALSIELGMRALDLAVGASDVPLPDDDIHEENQSDGSRSGADEKGILLPGGNLV 610
           GITTKDA LS ELGM+AL LAV    +    D+I +    D S SG D+ GIL PGG+LV
Sbjct: 127 GITTKDAVLSAELGMQALHLAVRGPALAPSGDEIQKGEHHDDSTSGPDDDGILQPGGHLV 186

Query: 611 IKLLESEDIQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 748
           IKLLESED Q FS+ICK  FRKASWLRPKATRSSSREIYLICQGL+
Sbjct: 187 IKLLESEDAQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGLR 232


>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  335 bits (858), Expect = 2e-89
 Identities = 173/226 (76%), Positives = 194/226 (85%), Gaps = 1/226 (0%)
 Frame = +2

Query: 71  PDFYYREAQRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLKK 250
           PDF+YREAQRLGY+ARSAFKLLQ+Q K++LI PG+SVLDLGCAPGAWLQVACQSLGPLK 
Sbjct: 7   PDFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQSLGPLKN 66

Query: 251 GGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVS 430
           GG VVGIDLKKVKVP ++CDSRVQT CADVM  PK+QV ALSP+ KGFSV+LSDMCPLVS
Sbjct: 67  GGAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSDMCPLVS 126

Query: 431 GITTKDAALSIELGMRALDLAVG-ASDVPLPDDDIHEENQSDGSRSGADEKGILLPGGNL 607
           GITT+DAALS ELGM+AL LAVG A+   L  D+I  +   + S   AD+ GIL PGG+L
Sbjct: 127 GITTRDAALSAELGMQALGLAVGRAATAHL--DEIRTDRLLNDSVCTADDNGILQPGGHL 184

Query: 608 VIKLLESEDIQEFSQICKARFRKASWLRPKATRSSSREIYLICQGL 745
           VIKLLESED +EFS+ICK  FRKASWLRPKATRSSSREIYLICQGL
Sbjct: 185 VIKLLESEDNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230


>ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Cucumis sativus] gi|449528435|ref|XP_004171210.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           E-like [Cucumis sativus]
          Length = 238

 Score =  318 bits (816), Expect = 1e-84
 Identities = 162/228 (71%), Positives = 195/228 (85%), Gaps = 2/228 (0%)
 Frame = +2

Query: 68  APDFYYREAQRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLK 247
           APDF+YREAQRLGY+ARSAFKLLQ+QN+++LIT G+SVLDLGCAPGAWLQVACQSLGP +
Sbjct: 6   APDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPR 65

Query: 248 KGGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLV 427
            GG V+GID+KKVKVP +HCDSRVQT  ADVM+ PK ++ +LSPK KGFSVILSDMCPLV
Sbjct: 66  NGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSDMCPLV 125

Query: 428 SGITTKDAALSIELGMRALDLAVGASDVPLPDDDIH--EENQSDGSRSGADEKGILLPGG 601
           SGITT+DAALS+ELGM+A++LA+G + + +  D IH  +++  D S S +D  G+L  GG
Sbjct: 126 SGITTRDAALSVELGMQAVNLALGEAALGV-GDVIHGKDKDSVDDSTSASDCDGVLRQGG 184

Query: 602 NLVIKLLESEDIQEFSQICKARFRKASWLRPKATRSSSREIYLICQGL 745
           +LV+KLLESED QEFS++ K  FRKASWLRPKATRSSSREIYLICQ L
Sbjct: 185 HLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 232


>ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferase E [Medicago
           truncatula] gi|355517752|gb|AES99375.1| Ribosomal RNA
           large subunit methyltransferase E [Medicago truncatula]
          Length = 238

 Score =  314 bits (804), Expect = 3e-83
 Identities = 162/230 (70%), Positives = 186/230 (80%), Gaps = 1/230 (0%)
 Frame = +2

Query: 62  SCAPDFYYREAQRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGP 241
           S APDF+Y+EAQRLGY+ARSAFKL+Q+Q +++LI PG+SVLDLGCAPG+WLQVACQSLGP
Sbjct: 4   SGAPDFFYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLGP 63

Query: 242 LKKGGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCP 421
              GG V+GID KKVKVP  HCDSRV+T  ADVM  PK Q+  LSPK KGFSVILSDMCP
Sbjct: 64  FHNGGSVLGIDHKKVKVPTSHCDSRVKTVAADVMTLPKQQLRDLSPKQKGFSVILSDMCP 123

Query: 422 LVSGITTKDAALSIELGMRALDLAVG-ASDVPLPDDDIHEENQSDGSRSGADEKGILLPG 598
           LVSGITTKDAALS ELGMRALDLAVG  + V   D D  +E +     SGAD+ G+L  G
Sbjct: 124 LVSGITTKDAALSFELGMRALDLAVGKVASVCNSDGDNLDEVKERCDPSGADDGGLLRVG 183

Query: 599 GNLVIKLLESEDIQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 748
           G+LV+KLLESED +E +QICK  F K+ WLRPKATR SSREIYLICQGL+
Sbjct: 184 GHLVVKLLESEDAKEINQICKPLFTKSVWLRPKATRPSSREIYLICQGLK 233