BLASTX nr result
ID: Coptis25_contig00012797
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012797
(1262 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248... 469 e-130
emb|CBI18973.3| unnamed protein product [Vitis vinifera] 447 e-123
ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793... 416 e-114
ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thalia... 383 e-104
gb|AAD41418.1|AC007727_7 Contains PF|00097 Zinc finger C3HC4 typ... 380 e-103
>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
Length = 1817
Score = 469 bits (1208), Expect = e-130
Identities = 235/387 (60%), Positives = 289/387 (74%), Gaps = 6/387 (1%)
Frame = -3
Query: 1254 DPGSRPKVTDVWKCIRELLVKPHIDILVGVHSLGSMEDMIHCLMLGNLCDTPKESDTESR 1075
DP SRP V DVWKCIREL++KP DI+V + + +HCL+LG LC PKE++ S+
Sbjct: 435 DPKSRPLVADVWKCIRELVIKPQFDIMVSQEGTVNEGNNVHCLVLGELCQLPKETNKGSK 494
Query: 1074 --RQDEFDLQGINGAEQQTGVGNIDTGLVEGLRLGKFESIDLQGHLDCITGLAVGGGFIF 901
+ DE + ++ Q G D +EGL +SI+LQGHLDCITGLAVGGGF+F
Sbjct: 495 AVKTDESGRENVD----QAGELQDDKDFIEGLSGSTVKSINLQGHLDCITGLAVGGGFLF 550
Query: 900 GSSFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICVWSIGVVL 721
SSFDKT+HVWSLQ+F+ V F HEHRVM+VVFV+ +PLCISGD G GI VW I + L
Sbjct: 551 SSSFDKTIHVWSLQDFTLVHQFRGHEHRVMAVVFVDEEQPLCISGDIGGGIFVWGISIPL 610
Query: 720 GQERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKAWSLRDYTLTCTMNGHKSVV 541
GQE LKKW+EQKDWRYSGIHALA+SGT +LYTGSGDKSIKAWSL+D TL+CTMNGHKSVV
Sbjct: 611 GQEPLKKWFEQKDWRYSGIHALAISGTGYLYTGSGDKSIKAWSLQDCTLSCTMNGHKSVV 670
Query: 540 SSLAVCDGVLYSGSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHEN 373
S+LAV DGVLYSGSWDGTIR WSL++H+PL VLGEDTP S ++ LL +HE+
Sbjct: 671 SALAVSDGVLYSGSWDGTIRLWSLNDHSPLTVLGEDTPGNVISVLSLKADHHMLLAAHED 730
Query: 372 GCVKLWKNDVLSSSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGS 193
GC+K+W+NDV SI+ GA+FA+ + K LF GG +K+V+V+EISGD+L + +GS
Sbjct: 731 GCLKIWRNDVFMKSIQAHDGAVFAVAMGGKWLFTGGWDKSVNVQEISGDDLQIEALPVGS 790
Query: 192 IACSSVITALLYWEGKLFVGFAVRIIK 112
IA S +TALLYW+GKLFVG A RIIK
Sbjct: 791 IASDSAVTALLYWQGKLFVGCADRIIK 817
>emb|CBI18973.3| unnamed protein product [Vitis vinifera]
Length = 734
Score = 447 bits (1151), Expect = e-123
Identities = 236/438 (53%), Positives = 290/438 (66%), Gaps = 56/438 (12%)
Frame = -3
Query: 1254 DPGSRPKVTDVWKCIRELLVKPHIDILVGVHSLGSMEDMIHCLMLGNLCDTPKESDTESR 1075
DP SRP V DVWKCIREL++KP DI+V + + +HCL+LG LC PKE++ S+
Sbjct: 301 DPKSRPLVADVWKCIRELVIKPQFDIMVSQEGTVNEGNNVHCLVLGELCQLPKETNKGSK 360
Query: 1074 --RQDEFDLQGINGAEQQTGVGNIDTGLVEGLRLGKFESIDLQGHLDCITGLAVG----- 916
+ DE + ++ Q G D +EGL +SI+LQGHLDCITGLAVG
Sbjct: 361 AVKTDESGRENVD----QAGELQDDKDFIEGLSGSTVKSINLQGHLDCITGLAVGEDAEI 416
Query: 915 ---------------------------------------------GGFIFGSSFDKTVHV 871
GGF+F SSFDKT+HV
Sbjct: 417 QELNFFLFQLSVCLVMVYRDFFVILVHDHLAIHSKPASLSFLSFIGGFLFSSSFDKTIHV 476
Query: 870 WSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICVWSIGVVLGQERLKKWYE 691
WSLQ+F+ V F HEHRVM+VVFV+ +PLCISGD G GI VW I + LGQE LKKW+E
Sbjct: 477 WSLQDFTLVHQFRGHEHRVMAVVFVDEEQPLCISGDIGGGIFVWGISIPLGQEPLKKWFE 536
Query: 690 QKDWRYSGIHALAVSGTEHLYTGSGDKSIKAWSLRDYTLTCTMNGHKSVVSSLAVCDGVL 511
QKDWRYSGIHALA+SGT +LYTGSGDKSIKAWSL+D TL+CTMNGHKSVVS+LAV DGVL
Sbjct: 537 QKDWRYSGIHALAISGTGYLYTGSGDKSIKAWSLQDCTLSCTMNGHKSVVSALAVSDGVL 596
Query: 510 YSGSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHENGCVKLWKNDV 343
YSGSWDGTIR WSL++H+PL VLGEDTP S ++ LL +HE+GC+K+W+NDV
Sbjct: 597 YSGSWDGTIRLWSLNDHSPLTVLGEDTPGNVISVLSLKADHHMLLAAHEDGCLKIWRNDV 656
Query: 342 LSSSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGSIACSSVITAL 163
SI+ GA+FA+ + K LF GG +K+V+V+EISGD+L + +GSIA S +TAL
Sbjct: 657 FMKSIQAHDGAVFAVAMGGKWLFTGGWDKSVNVQEISGDDLQIEALPVGSIASDSAVTAL 716
Query: 162 LYWEGKLFVGFAVRIIKV 109
LYW+GKLFVG A RIIKV
Sbjct: 717 LYWQGKLFVGCADRIIKV 734
>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
Length = 1815
Score = 416 bits (1070), Expect = e-114
Identities = 208/389 (53%), Positives = 273/389 (70%), Gaps = 6/389 (1%)
Frame = -3
Query: 1260 EFDPGSRPKVTDVWKCIRELLVKPHIDILVGVHSLGSMEDMIHCLMLGNLCDTPKESDTE 1081
+ +PG+RP V DV KCI+ +LVKP D L + S + CL+LG LC PK+S E
Sbjct: 432 DVNPGNRPDVVDVRKCIQNMLVKPQFDFLGNLEVTISRDYTGICLVLGELCLLPKQSSNE 491
Query: 1080 SRRQDEFDLQGINGAEQ--QTGVGNIDTGLVEGLRLGKFESIDLQGHLDCITGLAVGGGF 907
+ ++ + I G Q G G D GL G E DLQGHLDCI+GLAVGG +
Sbjct: 492 LIEHELWEKE-IGGQPNVVQDGKGKSDEDFAAGLPKGMTELKDLQGHLDCISGLAVGGRY 550
Query: 906 IFGSSFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICVWSIGV 727
+ SSFDKTVHVWSLQ+FSH+ +F HE++VM++V+V+ EPLCISGDSG GI +W I
Sbjct: 551 LLSSSFDKTVHVWSLQDFSHLHTFRGHENKVMALVYVDEEEPLCISGDSGGGIFIWGIAA 610
Query: 726 VLGQERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKAWSLRDYTLTCTMNGHKS 547
L Q+ L+KWYE+KDWR+SGIH+L VS LYTGSGD++IKAWSL+D TL CTM GH+S
Sbjct: 611 PLRQDPLRKWYEKKDWRFSGIHSLVVSKNHSLYTGSGDRTIKAWSLKDETLICTMTGHRS 670
Query: 546 VVSSLAVCDGVLYSGSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVT----CLLQSH 379
VVS+LAVCD VLYSGSWDGT+R WSL++H+PL VLGED P +S +T L+ +H
Sbjct: 671 VVSTLAVCDEVLYSGSWDGTVRLWSLNDHSPLTVLGEDPPAEMKSILAITVDRHLLVAAH 730
Query: 378 ENGCVKLWKNDVLSSSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSI 199
ENGC+K+W+NDV +S GAIFA+ ++ K L+ GG +K V+++E+SGDE D ++
Sbjct: 731 ENGCIKVWRNDVFMNSKTLHKGAIFAMSMQGKCLYTGGWDKNVNIQELSGDEFELDVKAY 790
Query: 198 GSIACSSVITALLYWEGKLFVGFAVRIIK 112
GSI CS+V TA+L +GKL+VG+A + IK
Sbjct: 791 GSIPCSAVATAILCSQGKLYVGYADKSIK 819
>ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
gi|17529236|gb|AAL38845.1| putative SecA-type chloroplast
protein transport factor [Arabidopsis thaliana]
gi|20465933|gb|AAM20152.1| putative SecA-type chloroplast
transport factor protein [Arabidopsis thaliana]
gi|110739333|dbj|BAF01579.1| hypothetical protein
[Arabidopsis thaliana] gi|332192014|gb|AEE30135.1| zinc
ion binding protein [Arabidopsis thaliana]
Length = 811
Score = 383 bits (984), Expect = e-104
Identities = 190/389 (48%), Positives = 272/389 (69%), Gaps = 4/389 (1%)
Frame = -3
Query: 1254 DPGSRPKVTDVWKCIRELLVKPHIDILVGVHSLGSMEDMIHCLMLGNLCDTPKESDTESR 1075
DP +RP +TD+WKCIREL++KP + + +H + CL LC + + ES+
Sbjct: 426 DPQARPVLTDLWKCIRELVMKPRFNSMSRLHKTIYGKRKQFCLAQSELC---RLVEVESK 482
Query: 1074 RQDEFDLQGINGAEQQTGVGNIDTGLVEGLRLGKFESIDLQGHLDCITGLAVGGGFIFGS 895
D+ +L G+ ++ G +D + GK S D++GH D +TGLAVGGGF+F S
Sbjct: 483 EVDK-ELPGMKIGDEAEE-GKVDIDFPGRVSEGKVRSKDMRGHQDSVTGLAVGGGFLFSS 540
Query: 894 SFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICVWSIGVVLGQ 715
S+D+T+ +WSL++FSHV +F H+ +VM+++ + TEP+C+SGD G GI VWS L +
Sbjct: 541 SYDRTILIWSLKDFSHVHTFKGHQDKVMALIHIEGTEPVCVSGDGGGGIFVWSTTFPLEE 600
Query: 714 ERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKAWSLRDYTLTCTMNGHKSVVSS 535
+ L+KWYE KDWRY+GIHALA S H+YTGSGD +IKAWSL+D +L CTM+GHKSVVS+
Sbjct: 601 QPLRKWYEPKDWRYTGIHALAYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVST 660
Query: 534 LAVCDGVLYSGSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHENGC 367
L V +GVLYSGSWDGT+R WSLS+++ L VLGE+TP RS ++ L+ +++NG
Sbjct: 661 LVVVNGVLYSGSWDGTVRLWSLSDNSLLTVLGEETPGIVRSILSLAADDQTLVAAYQNGD 720
Query: 366 VKLWKNDVLSSSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGSIA 187
+++W++D L S++ Q+GAI ++ + K LF GG +KT++V+E+SGDE+ + +GSI
Sbjct: 721 IQIWRDDTLMKSMKIQNGAILSIAVNGKWLFTGGWDKTINVQELSGDEISVNCAHVGSIP 780
Query: 186 CSSVITALLYWEGKLFVGFAVRIIKVYKY 100
SSVIT+LLYWEGKLF GFA + IKVY +
Sbjct: 781 GSSVITSLLYWEGKLFAGFADKTIKVYYF 809
>gb|AAD41418.1|AC007727_7 Contains PF|00097 Zinc finger C3HC4 type and 4 WD40 PF|00400 (G beta)
domains [Arabidopsis thaliana]
Length = 860
Score = 380 bits (976), Expect = e-103
Identities = 189/386 (48%), Positives = 270/386 (69%), Gaps = 4/386 (1%)
Frame = -3
Query: 1254 DPGSRPKVTDVWKCIRELLVKPHIDILVGVHSLGSMEDMIHCLMLGNLCDTPKESDTESR 1075
DP +RP +TD+WKCIREL++KP + + +H + CL LC + + ES+
Sbjct: 426 DPQARPVLTDLWKCIRELVMKPRFNSMSRLHKTIYGKRKQFCLAQSELC---RLVEVESK 482
Query: 1074 RQDEFDLQGINGAEQQTGVGNIDTGLVEGLRLGKFESIDLQGHLDCITGLAVGGGFIFGS 895
D+ +L G+ ++ G +D + GK S D++GH D +TGLAVGGGF+F S
Sbjct: 483 EVDK-ELPGMKIGDEAEE-GKVDIDFPGRVSEGKVRSKDMRGHQDSVTGLAVGGGFLFSS 540
Query: 894 SFDKTVHVWSLQNFSHVQSFVSHEHRVMSVVFVNATEPLCISGDSGSGICVWSIGVVLGQ 715
S+D+T+ +WSL++FSHV +F H+ +VM+++ + TEP+C+SGD G GI VWS L +
Sbjct: 541 SYDRTILIWSLKDFSHVHTFKGHQDKVMALIHIEGTEPVCVSGDGGGGIFVWSTTFPLEE 600
Query: 714 ERLKKWYEQKDWRYSGIHALAVSGTEHLYTGSGDKSIKAWSLRDYTLTCTMNGHKSVVSS 535
+ L+KWYE KDWRY+GIHALA S H+YTGSGD +IKAWSL+D +L CTM+GHKSVVS+
Sbjct: 601 QPLRKWYEPKDWRYTGIHALAYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVST 660
Query: 534 LAVCDGVLYSGSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHENGC 367
L V +GVLYSGSWDGT+R WSLS+++ L VLGE+TP RS ++ L+ +++NG
Sbjct: 661 LVVVNGVLYSGSWDGTVRLWSLSDNSLLTVLGEETPGIVRSILSLAADDQTLVAAYQNGD 720
Query: 366 VKLWKNDVLSSSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGSIA 187
+++W++D L S++ Q+GAI ++ + K LF GG +KT++V+E+SGDE+ + +GSI
Sbjct: 721 IQIWRDDTLMKSMKIQNGAILSIAVNGKWLFTGGWDKTINVQELSGDEISVNCAHVGSIP 780
Query: 186 CSSVITALLYWEGKLFVGFAVRIIKV 109
SSVIT+LLYWEGKLF GFA + IKV
Sbjct: 781 GSSVITSLLYWEGKLFAGFADKTIKV 806