BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012791
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523868.1| Coiled-coil domain-containing protein, putat...   251   2e-64
ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulato...   248   1e-63
ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato...   232   1e-58
emb|CBI28266.3| unnamed protein product [Vitis vinifera]              232   1e-58
ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56

>ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223536956|gb|EEF38594.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 327

 Score =  251 bits (642), Expect = 2e-64
 Identities = 140/313 (44%), Positives = 187/313 (59%), Gaps = 4/313 (1%)
 Frame = -3

Query: 978 FSHFYI*VEEKMKKYGLQLRIPQQSRQPMGPPAARAPVFGXXXXXXXXXXDISRQATKKK 799
           F H +   E + +KYGLQLR+  Q +    P   +  +FG          +ISR A+K K
Sbjct: 2   FMHKFECSEMQQQKYGLQLRVKPQQQAKKPPLPTKPLLFGQDEDDDNVEKEISRHASKNK 61

Query: 798 ALKDVEEQHKKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQR 619
           +LKD+EE HKKALE+DP+ FDYDGVYD MK+  V +P  QDR++R+ KYI  LM+KA+ R
Sbjct: 62  SLKDIEEMHKKALEEDPSAFDYDGVYDDMKQK-VAQPRHQDRQERKPKYIEALMKKAEIR 120

Query: 618 EQEHEIIYERKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXEDV 439
           ++EHEIIYE+KL KER+KD+H+Y DKDK++TSAYKKKLAEQ KWM+           +DV
Sbjct: 121 QREHEIIYEKKLTKERTKDDHLYADKDKFVTSAYKKKLAEQAKWMEEERLRQLKEEKDDV 180

Query: 438 TKKSDILDFYFNLSKNVAYGAKAAESSRQVEQDEIINTDASGKEVVPRANSPSNSAKXXX 259
           TKKSD+ DFYFNL KNVA+GAK  +S +Q +Q E+  ++    E    A S S   +   
Sbjct: 181 TKKSDLSDFYFNLGKNVAFGAKEIDSRKQEKQTELRKSEKLDDEA---AGSTSGRGRPLP 237

Query: 258 XXXXXXXXXXXXXXXXXXXXXXXXXSKENNDSLDV----KSEVKTSVQDNTVAEQPPAEQ 91
                                     + N++S DV    + +V TSVQ+NT  E+P A Q
Sbjct: 238 DSKSIMESSRVNEEHHDGTSPVPILPRRNSESSDVNPVSERKVDTSVQENTATEEPLANQ 297

Query: 90  KKHNPQKRKEDEV 52
            K +  KR ED V
Sbjct: 298 PKQDHHKRNEDTV 310


>ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis
           vinifera] gi|147866225|emb|CAN79937.1| hypothetical
           protein VITISV_027776 [Vitis vinifera]
          Length = 300

 Score =  248 bits (634), Expect = 1e-63
 Identities = 143/300 (47%), Positives = 186/300 (62%), Gaps = 2/300 (0%)
 Frame = -3

Query: 945 MKKYGLQLRIP--QQSRQPMGPPAARAPVFGXXXXXXXXXXDISRQATKKKALKDVEEQH 772
           MKKYGLQLR+P  QQ +QP  PP    P+            +ISRQA+K K LKD+EEQH
Sbjct: 1   MKKYGLQLRVPPSQQKKQPTRPPLP-PPLGFCDENEDDIEREISRQASKNKTLKDIEEQH 59

Query: 771 KKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYE 592
           KKALE+DPT FDYD VY++MKE  + RPL QDR++R+ KYI +L+EKAKQRE+EHEIIYE
Sbjct: 60  KKALEEDPTAFDYDDVYEEMKEKTI-RPLAQDRQERKPKYIQKLIEKAKQREREHEIIYE 118

Query: 591 RKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXEDVTKKSDILDF 412
           +KL KERSKD+ +Y DKDK+IT AYKKKLAEQ KW++           +DVTKKSD+ DF
Sbjct: 119 KKLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDF 178

Query: 411 YFNLSKNVAYGAKAAESSRQVEQDEIINTDASGKEVVPRANSPSNSAKXXXXXXXXXXXX 232
           Y+NLSKNVA+G   A+  +   ++E ++ D S K      +S +N+              
Sbjct: 179 YYNLSKNVAFGGIEAKLRK---REEKVDADTSEK-----GSSSTNT------HTDSSVIN 224

Query: 231 XXXXXXXXXXXXXXXXSKENNDSLDVKSEVKTSVQDNTVAEQPPAEQKKHNPQKRKEDEV 52
                           SKE++ SLD+K     S Q+  +AE+  A+Q K +  KR ED V
Sbjct: 225 EGHEGHEGHEGKTSTPSKESSQSLDIKPVSDASAQEKALAEETLAQQPKSDHHKRSEDAV 284


>ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
           [Cucumis sativus] gi|449520024|ref|XP_004167034.1|
           PREDICTED: nuclear speckle splicing regulatory protein
           1-like [Cucumis sativus]
          Length = 322

 Score =  232 bits (592), Expect = 1e-58
 Identities = 147/323 (45%), Positives = 185/323 (57%), Gaps = 25/323 (7%)
 Frame = -3

Query: 945 MKKYGLQLRI-PQQSRQPMGPPAARAPVFGXXXXXXXXXXDISRQATKKKALKDVEEQHK 769
           M KYGLQLR+ P Q +QP  PP   AP+            +ISRQA+K KALKD+EEQHK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLP-APLGFQDDDDDDVEREISRQASKNKALKDIEEQHK 59

Query: 768 KALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYER 589
           KALE+DP+VFDYDGVYD+MKE  VV+P   DRE+R+ KYI  LM+KA++RE+E EIIYER
Sbjct: 60  KALEEDPSVFDYDGVYDEMKEK-VVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYER 118

Query: 588 KLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXEDVTKKSDILDFY 409
           KLAKERSKD+H+Y  KDK++T AYKKKLAEQ KWM+           EDVTKKSD+ DFY
Sbjct: 119 KLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFY 178

Query: 408 FNLSKNVAYGAKAA-------------ESSRQVE------QDEIINTDASGKEVVPRANS 286
           F+L KNVAYGA+ A             +  +Q E       +E  N D     ++  +N 
Sbjct: 179 FSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNL 238

Query: 285 PSNSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKENNDSLDVKSEVKTSVQDNT-VAE 109
           PS S K                            S +   S +++     ++ D T V E
Sbjct: 239 PSCSEK--------------TIEEHPHLEERLPFSNKTTPS-NIEGTSPPTLHDKTPVQE 283

Query: 108 QPPAEQKKHNPQ----KRKEDEV 52
           QP  EQ +  P+    KR ED V
Sbjct: 284 QPKHEQSEQPPKSDHHKRNEDAV 306


>emb|CBI28266.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score =  232 bits (591), Expect = 1e-58
 Identities = 122/214 (57%), Positives = 154/214 (71%), Gaps = 2/214 (0%)
 Frame = -3

Query: 945 MKKYGLQLRIP--QQSRQPMGPPAARAPVFGXXXXXXXXXXDISRQATKKKALKDVEEQH 772
           MKKYGLQLR+P  QQ +QP  PP    P+            +ISRQA+K K LKD+EEQH
Sbjct: 1   MKKYGLQLRVPPSQQKKQPTRPPLP-PPLGFCDENEDDIEREISRQASKNKTLKDIEEQH 59

Query: 771 KKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYE 592
           KKALE+DPT FDYD VY++MKE  + RPL QDR++R+ KYI +L+EKAKQRE+EHEIIYE
Sbjct: 60  KKALEEDPTAFDYDDVYEEMKEKTI-RPLAQDRQERKPKYIQKLIEKAKQREREHEIIYE 118

Query: 591 RKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXEDVTKKSDILDF 412
           +KL KERSKD+ +Y DKDK+IT AYKKKLAEQ KW++           +DVTKKSD+ DF
Sbjct: 119 KKLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDF 178

Query: 411 YFNLSKNVAYGAKAAESSRQVEQDEIINTDASGK 310
           Y+NLSKNVA+G   A+  +   ++E ++ D S K
Sbjct: 179 YYNLSKNVAFGGIEAKLRK---REEKVDADTSEK 209


>ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|222849233|gb|EEE86780.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  224 bits (571), Expect = 3e-56
 Identities = 115/203 (56%), Positives = 149/203 (73%)
 Frame = -3

Query: 945 MKKYGLQLRIPQQSRQPMGPPAARAPVFGXXXXXXXXXXDISRQATKKKALKDVEEQHKK 766
           MKKYGL LR PQQ + P  PP   A  FG           ISRQA K K+LKD+EEQHKK
Sbjct: 1   MKKYGLLLRQPQQKKPPRPPPPT-ALGFGDDDEDDVEKE-ISRQAAKNKSLKDIEEQHKK 58

Query: 765 ALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYERK 586
           ALE+DP+VFDYDGVYD+MK+  + +P   DR++R+SKYI  LM KA++R+++H++I+E+ 
Sbjct: 59  ALEEDPSVFDYDGVYDEMKQK-IAQPKALDRQKRESKYIKTLMGKAEERKRQHDVIFEKN 117

Query: 585 LAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXEDVTKKSDILDFYF 406
           LAKERSK++H++ DKDK++T+AYK+KLAEQEKWM+           EDVTKKSD+ DFYF
Sbjct: 118 LAKERSKEDHLFADKDKFVTAAYKRKLAEQEKWMEEERLRELREEKEDVTKKSDLSDFYF 177

Query: 405 NLSKNVAYGAKAAESSRQVEQDE 337
           NL KNVA GAK   S +Q +QD+
Sbjct: 178 NLGKNVALGAKDLLSKKQEKQDK 200