BLASTX nr result

ID: Coptis25_contig00012789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012789
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273020.1| PREDICTED: uncharacterized protein LOC100241...   333   8e-90
emb|CAN60362.1| hypothetical protein VITISV_024684 [Vitis vinifera]   333   8e-90
ref|XP_002315147.1| predicted protein [Populus trichocarpa] gi|2...   333   1e-89
ref|NP_567031.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis th...   324   6e-87
emb|CAB87858.1| putative protein [Arabidopsis thaliana]               324   6e-87

>ref|XP_002273020.1| PREDICTED: uncharacterized protein LOC100241552 [Vitis vinifera]
           gi|297736576|emb|CBI25447.3| unnamed protein product
           [Vitis vinifera]
          Length = 860

 Score =  333 bits (855), Expect = 8e-90
 Identities = 157/180 (87%), Positives = 167/180 (92%)
 Frame = -3

Query: 542 LDLSQNTDYASQAALWGIEGLPELGKIYPLGGSGDRLGLVDAVTGECLPTAMLPYCGRTL 363
           LDLS+NT YASQAALWG+EGLPELG+IYPLGGS DRLGLVD  TGECLP AMLPYCGRTL
Sbjct: 263 LDLSKNTAYASQAALWGVEGLPELGEIYPLGGSADRLGLVDPDTGECLPAAMLPYCGRTL 322

Query: 362 LEGLIRDLQAREFLYFNIHGKQCITPVAIMTSSAKNNHERITSLCEAVGWFGRGRSNFIL 183
           LEGLIRDLQAREFLYF I+GKQCITPVAIMTS+AKNNHE ITSLCE   WFGRG+S+F L
Sbjct: 323 LEGLIRDLQAREFLYFKIYGKQCITPVAIMTSAAKNNHEHITSLCERHQWFGRGQSSFQL 382

Query: 182 FEQPLVPAVSAEDGQWLVSKQFTPVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVRQV 3
           FEQPLVPAVSAEDG+WLV+K FTPVCKPGGHGVIWKLAYDKG+FQWFY HGRKGATVRQV
Sbjct: 383 FEQPLVPAVSAEDGEWLVTKPFTPVCKPGGHGVIWKLAYDKGIFQWFYDHGRKGATVRQV 442


>emb|CAN60362.1| hypothetical protein VITISV_024684 [Vitis vinifera]
          Length = 866

 Score =  333 bits (855), Expect = 8e-90
 Identities = 157/180 (87%), Positives = 167/180 (92%)
 Frame = -3

Query: 542 LDLSQNTDYASQAALWGIEGLPELGKIYPLGGSGDRLGLVDAVTGECLPTAMLPYCGRTL 363
           LDLS+NT YASQAALWG+EGLPELG+IYPLGGS DRLGLVD  TGECLP AMLPYCGRTL
Sbjct: 265 LDLSKNTAYASQAALWGVEGLPELGEIYPLGGSADRLGLVDPDTGECLPAAMLPYCGRTL 324

Query: 362 LEGLIRDLQAREFLYFNIHGKQCITPVAIMTSSAKNNHERITSLCEAVGWFGRGRSNFIL 183
           LEGLIRDLQAREFLYF I+GKQCITPVAIMTS+AKNNHE ITSLCE   WFGRG+S+F L
Sbjct: 325 LEGLIRDLQAREFLYFKIYGKQCITPVAIMTSAAKNNHEHITSLCERHQWFGRGQSSFQL 384

Query: 182 FEQPLVPAVSAEDGQWLVSKQFTPVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVRQV 3
           FEQPLVPAVSAEDG+WLV+K FTPVCKPGGHGVIWKLAYDKG+FQWFY HGRKGATVRQV
Sbjct: 385 FEQPLVPAVSAEDGEWLVTKPFTPVCKPGGHGVIWKLAYDKGIFQWFYDHGRKGATVRQV 444


>ref|XP_002315147.1| predicted protein [Populus trichocarpa] gi|222864187|gb|EEF01318.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score =  333 bits (854), Expect = 1e-89
 Identities = 156/182 (85%), Positives = 168/182 (92%)
 Frame = -3

Query: 548 SVLDLSQNTDYASQAALWGIEGLPELGKIYPLGGSGDRLGLVDAVTGECLPTAMLPYCGR 369
           S LDLS+NT+YASQAALWGIEGLP+LG+IYPLGGS DRLGLVD  TGECLP AMLPYCGR
Sbjct: 277 SGLDLSKNTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPDTGECLPAAMLPYCGR 336

Query: 368 TLLEGLIRDLQAREFLYFNIHGKQCITPVAIMTSSAKNNHERITSLCEAVGWFGRGRSNF 189
           TLLEGLIRDLQAREFLYF I+GKQCITPVAIMTSSAKNNHE ITSLCE + WFGRG+S+F
Sbjct: 337 TLLEGLIRDLQAREFLYFKIYGKQCITPVAIMTSSAKNNHEHITSLCERLSWFGRGQSSF 396

Query: 188 ILFEQPLVPAVSAEDGQWLVSKQFTPVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVR 9
            LFEQPLVPA+SAEDGQWLV+K F PVCKPGGHGVIWKLAYDKG+F+WFY H RKGATVR
Sbjct: 397 QLFEQPLVPAISAEDGQWLVTKPFAPVCKPGGHGVIWKLAYDKGIFEWFYDHDRKGATVR 456

Query: 8   QV 3
           QV
Sbjct: 457 QV 458


>ref|NP_567031.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana]
           gi|332645948|gb|AEE79469.1| UDP-glucose
           pyrophosphorylase 3 [Arabidopsis thaliana]
          Length = 883

 Score =  324 bits (830), Expect = 6e-87
 Identities = 150/182 (82%), Positives = 166/182 (91%)
 Frame = -3

Query: 548 SVLDLSQNTDYASQAALWGIEGLPELGKIYPLGGSGDRLGLVDAVTGECLPTAMLPYCGR 369
           SVLDL+Q  DYASQAALWGIEGLP+LG+IYPLGG+ DRLGL+D+ TGECLP AML +CGR
Sbjct: 280 SVLDLTQEEDYASQAALWGIEGLPDLGEIYPLGGAADRLGLIDSETGECLPAAMLAHCGR 339

Query: 368 TLLEGLIRDLQAREFLYFNIHGKQCITPVAIMTSSAKNNHERITSLCEAVGWFGRGRSNF 189
           TLLEGLIRDLQAREFLYF ++GKQC+TPVAIMTS+AKNNHE ++SLCE + WFGRG+SNF
Sbjct: 340 TLLEGLIRDLQAREFLYFKLYGKQCVTPVAIMTSAAKNNHEHVSSLCERLKWFGRGQSNF 399

Query: 188 ILFEQPLVPAVSAEDGQWLVSKQFTPVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVR 9
            LFEQPLVPAVSAEDGQW+VSK F PV KPGGHGVIWKLAYDKGVF WFY HGRKGATVR
Sbjct: 400 RLFEQPLVPAVSAEDGQWIVSKPFVPVSKPGGHGVIWKLAYDKGVFNWFYDHGRKGATVR 459

Query: 8   QV 3
           QV
Sbjct: 460 QV 461


>emb|CAB87858.1| putative protein [Arabidopsis thaliana]
          Length = 871

 Score =  324 bits (830), Expect = 6e-87
 Identities = 150/182 (82%), Positives = 166/182 (91%)
 Frame = -3

Query: 548 SVLDLSQNTDYASQAALWGIEGLPELGKIYPLGGSGDRLGLVDAVTGECLPTAMLPYCGR 369
           SVLDL+Q  DYASQAALWGIEGLP+LG+IYPLGG+ DRLGL+D+ TGECLP AML +CGR
Sbjct: 280 SVLDLTQEEDYASQAALWGIEGLPDLGEIYPLGGAADRLGLIDSETGECLPAAMLAHCGR 339

Query: 368 TLLEGLIRDLQAREFLYFNIHGKQCITPVAIMTSSAKNNHERITSLCEAVGWFGRGRSNF 189
           TLLEGLIRDLQAREFLYF ++GKQC+TPVAIMTS+AKNNHE ++SLCE + WFGRG+SNF
Sbjct: 340 TLLEGLIRDLQAREFLYFKLYGKQCVTPVAIMTSAAKNNHEHVSSLCERLKWFGRGQSNF 399

Query: 188 ILFEQPLVPAVSAEDGQWLVSKQFTPVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVR 9
            LFEQPLVPAVSAEDGQW+VSK F PV KPGGHGVIWKLAYDKGVF WFY HGRKGATVR
Sbjct: 400 RLFEQPLVPAVSAEDGQWIVSKPFVPVSKPGGHGVIWKLAYDKGVFNWFYDHGRKGATVR 459

Query: 8   QV 3
           QV
Sbjct: 460 QV 461


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