BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012781
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
ref|XP_002309925.1| predicted protein [Populus trichocarpa] gi|1...   330   5e-88
ref|XP_003525130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   324   3e-86
ref|XP_003602643.1| E3 ubiquitin-protein ligase mib1 [Medicago t...   321   2e-85
ref|XP_003523218.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   317   2e-84

>ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|222855711|gb|EEE93258.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  335 bits (858), Expect = 1e-89
 Identities = 163/232 (70%), Positives = 185/232 (79%), Gaps = 3/232 (1%)
 Frame = +3

Query: 3   GPTSFAPVIDAAIDIVEKSSGQYHVLVIIADGQVTRNPDTPPGRVSHQEQATINSIVAAS 182
           GPTSFAP+IDAAIDIVEKS GQYHVLV+IADGQVTR PDTPPGR S QE AT+NSIVAAS
Sbjct: 126 GPTSFAPIIDAAIDIVEKSGGQYHVLVVIADGQVTRGPDTPPGRFSPQEHATVNSIVAAS 185

Query: 183 HYPLSIILVGVGDGPWDAMHQFDDNIPYRAFDNFQFVNFTKIMSENKDTSKKESEFALAA 362
            YP+SIILVGVGDGPWDAM QFDDNIP RAFDNFQFVNFTKIMS+N + SKKE+ FALAA
Sbjct: 186 KYPISIILVGVGDGPWDAMQQFDDNIPQRAFDNFQFVNFTKIMSDNTEASKKETAFALAA 245

Query: 363 LMEIPIQYKATQRLNILEGDNVGXXXXXXXXXXXEVIDHDNTVNMYPPMTSVQPVVDMAP 542
           LMEIP+QY+ATQ L +      G           EVIDHDN V   P MT+ +PV   AP
Sbjct: 246 LMEIPLQYRATQTLQL------GGPHTRLLPPPREVIDHDNAVKSIPHMTNFKPVQPTAP 299

Query: 543 ---VEQVCPICLTNPKDMAFGCGHLTCKECSITVSTCPICREPITTRLRLYS 689
              VE VCPICL NPKD+AFGCGH+TC++C  ++S CP+CR+PITTRLRL++
Sbjct: 300 TASVEPVCPICLANPKDLAFGCGHMTCRDCGASISACPLCRQPITTRLRLFT 351


>ref|XP_002309925.1| predicted protein [Populus trichocarpa] gi|118486339|gb|ABK95010.1|
           unknown [Populus trichocarpa]
           gi|222852828|gb|EEE90375.1| predicted protein [Populus
           trichocarpa]
          Length = 364

 Score =  330 bits (845), Expect = 5e-88
 Identities = 162/229 (70%), Positives = 185/229 (80%)
 Frame = +3

Query: 3   GPTSFAPVIDAAIDIVEKSSGQYHVLVIIADGQVTRNPDTPPGRVSHQEQATINSIVAAS 182
           GPTSFA +I+AAIDIVEKS GQYHVLVIIADGQVTR PDTPPGR+S QEQAT+NSIVAAS
Sbjct: 137 GPTSFAAIINAAIDIVEKS-GQYHVLVIIADGQVTRTPDTPPGRLSPQEQATVNSIVAAS 195

Query: 183 HYPLSIILVGVGDGPWDAMHQFDDNIPYRAFDNFQFVNFTKIMSENKDTSKKESEFALAA 362
            +PLSII VGVGDGPW+AM QFDDNIP R FDNFQFVNFTKIM +N + SKKE+ FALAA
Sbjct: 196 KHPLSIIFVGVGDGPWNAMQQFDDNIPQREFDNFQFVNFTKIMLDNTEASKKETAFALAA 255

Query: 363 LMEIPIQYKATQRLNILEGDNVGXXXXXXXXXXXEVIDHDNTVNMYPPMTSVQPVVDMAP 542
           LMEIP+QY+ATQRL   + D VG           EVIDHDN V   P +T+ + V     
Sbjct: 256 LMEIPLQYRATQRLQHTDHDLVGGPRTRPLPPPREVIDHDNAVKSIPHITNFETVQPSTS 315

Query: 543 VEQVCPICLTNPKDMAFGCGHLTCKECSITVSTCPICREPITTRLRLYS 689
           VE VCPICLTNPKDMAFGCGHLTC++C  ++STCPICR+PITTRL+L++
Sbjct: 316 VEPVCPICLTNPKDMAFGCGHLTCRDCGASLSTCPICRQPITTRLKLFT 364


>ref|XP_003525130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Glycine max]
          Length = 426

 Score =  324 bits (830), Expect = 3e-86
 Identities = 162/231 (70%), Positives = 179/231 (77%), Gaps = 2/231 (0%)
 Frame = +3

Query: 3   GPTSFAPVIDAAIDIVEKSSGQYHVLVIIADGQVTRNPDTPPGRVSHQEQATINSIVAAS 182
           GPTSFAPVIDAA+ IVE+S+GQYHVLVIIADGQVTRN DTP G+ S QEQATINSI+AAS
Sbjct: 196 GPTSFAPVIDAAVGIVERSNGQYHVLVIIADGQVTRNSDTPHGKFSPQEQATINSIIAAS 255

Query: 183 HYPLSIILVGVGDGPWDAMHQFDDNIPYRAFDNFQFVNFTKIMSENKDTSKKESEFALAA 362
           HYPLSIILVGVGDGPWD M  FDDNI  R FDNFQFVNFTKI SENKD SKKE+ FALAA
Sbjct: 256 HYPLSIILVGVGDGPWDEMQHFDDNITQRLFDNFQFVNFTKITSENKDASKKEAAFALAA 315

Query: 363 LMEIPIQYKATQRLNILEGDNVGXXXXXXXXXXXEVIDHDNTVNMYPPMTSVQPVVDMAP 542
           LMEIPIQY+ TQ L I   +              EVID DN V   P + + + V   AP
Sbjct: 316 LMEIPIQYRITQNLQIANENPTSHQRKRPLPPPKEVIDRDNAVLAVPHVPNFESVEPSAP 375

Query: 543 --VEQVCPICLTNPKDMAFGCGHLTCKECSITVSTCPICREPITTRLRLYS 689
             VE VCPICLTNPKDMAFGCGH TCKEC +T+S+CP+CR+ ITTRLRLY+
Sbjct: 376 AAVESVCPICLTNPKDMAFGCGHTTCKECGVTLSSCPMCRQEITTRLRLYT 426


>ref|XP_003602643.1| E3 ubiquitin-protein ligase mib1 [Medicago truncatula]
           gi|355491691|gb|AES72894.1| E3 ubiquitin-protein ligase
           mib1 [Medicago truncatula]
          Length = 432

 Score =  321 bits (822), Expect = 2e-85
 Identities = 158/231 (68%), Positives = 178/231 (77%), Gaps = 2/231 (0%)
 Frame = +3

Query: 3   GPTSFAPVIDAAIDIVEKSSGQYHVLVIIADGQVTRNPDTPPGRVSHQEQATINSIVAAS 182
           GPTSFAPVIDAAIDIVE+++GQYHVLVIIADGQVTRNP TP G++S QEQATI SI+AAS
Sbjct: 202 GPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQVTRNPGTPHGKLSPQEQATITSIIAAS 261

Query: 183 HYPLSIILVGVGDGPWDAMHQFDDNIPYRAFDNFQFVNFTKIMSENKDTSKKESEFALAA 362
           HYPLSIILVGVGDGPWD M  FDDNI  R FDNFQFVNFTKIMSEN + SKKE+EFALAA
Sbjct: 262 HYPLSIILVGVGDGPWDEMKHFDDNITGRVFDNFQFVNFTKIMSENTEASKKETEFALAA 321

Query: 363 LMEIPIQYKATQRLNILEGDNVGXXXXXXXXXXXEVIDHDNTVNMYPPMTSVQPVVDMAP 542
           LMEIP QY+A Q + +   + V            E+IDHDN     P +T+   +   AP
Sbjct: 322 LMEIPFQYRAAQNIQLANSEPVHYQHKRPLPPPKEIIDHDNAFIATPRITNFDSIEPTAP 381

Query: 543 --VEQVCPICLTNPKDMAFGCGHLTCKECSITVSTCPICREPITTRLRLYS 689
              E VCPICLTNPKDMAFGCGH TCKEC  T+S CP+CR+ ITTRLRLY+
Sbjct: 382 ASAEPVCPICLTNPKDMAFGCGHTTCKECGATLSLCPMCRQQITTRLRLYT 432


>ref|XP_003523218.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Glycine max]
          Length = 432

 Score =  317 bits (813), Expect = 2e-84
 Identities = 157/231 (67%), Positives = 180/231 (77%), Gaps = 2/231 (0%)
 Frame = +3

Query: 3   GPTSFAPVIDAAIDIVEKSSGQYHVLVIIADGQVTRNPDTPPGRVSHQEQATINSIVAAS 182
           GPTSFAPVIDAAIDIVE+++GQYHVLVIIADGQVTRNPD P G++S QEQATINSI+AAS
Sbjct: 202 GPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQVTRNPDVPYGKLSPQEQATINSIIAAS 261

Query: 183 HYPLSIILVGVGDGPWDAMHQFDDNIPYRAFDNFQFVNFTKIMSENKDTSKKESEFALAA 362
           HYPLSIILVGVGDGPWD M  +DDNI  R FDNFQFVNFTKIMSEN + SKKE+ FALAA
Sbjct: 262 HYPLSIILVGVGDGPWDEMKYYDDNITERLFDNFQFVNFTKIMSENTEASKKEATFALAA 321

Query: 363 LMEIPIQYKATQRLNILEGDNVGXXXXXXXXXXXEVIDHDNTVNMYPPMTSVQPVVDMAP 542
           LMEIP+QY+A Q + + + ++V            EVI HDN     P M +++     AP
Sbjct: 322 LMEIPLQYRAAQNIQLNDRESVLHQHKRPLPPPNEVIHHDNARMAIPHMPNLESAESTAP 381

Query: 543 --VEQVCPICLTNPKDMAFGCGHLTCKECSITVSTCPICREPITTRLRLYS 689
              E VCPICLTNPKDMAFGCGH TCKEC  T+S+CP+CR  ITTRLRLY+
Sbjct: 382 AAAEPVCPICLTNPKDMAFGCGHTTCKECGSTLSSCPMCRHQITTRLRLYT 432