BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012776
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinif...   446   e-122
ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]...   418   e-114
ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114
ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycin...   412   e-113
ref|XP_002519085.1| pentatricopeptide repeat-containing protein,...   404   e-110

>ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinifera]
            gi|297744710|emb|CBI37972.3| unnamed protein product
            [Vitis vinifera]
          Length = 426

 Score =  446 bits (1146), Expect = e-122
 Identities = 220/351 (62%), Positives = 279/351 (79%)
 Frame = -3

Query: 1536 GVARNVAECMSKLGAKPFMISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNL 1357
            GVARN+AECMSKLG KP+MIS +G DMAGN+L+E+WKSA LS EGI K  DI T VVC++
Sbjct: 77   GVARNIAECMSKLGTKPYMISALGLDMAGNMLLEHWKSARLSMEGIRKHHDIQTSVVCHI 136

Query: 1356 FDTNGELTAAVASVEAIEKYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAES 1177
            FD +GEL A VASVEAIE +LT +WI++F C+I SAPVLM+DANL+P +LEASC++AAES
Sbjct: 137  FDGDGELAAGVASVEAIENFLTSDWIRQFKCNICSAPVLMVDANLSPSALEASCQMAAES 196

Query: 1176 NIPVWFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQS 997
            + PVWFEPVSV KS+RVAS+A Y+TF SPNEDELIAMANA+S +D F P+Q    G+K S
Sbjct: 197  STPVWFEPVSVIKSRRVASVAKYITFASPNEDELIAMANALSCKDVFHPIQRDYVGTKCS 256

Query: 996  IEGLFHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLF 817
            IE LF MLKPA+LVLLEKG+K+VV+TLG+DGVF+C+K+GPGF+ N L+ TKP   G +L+
Sbjct: 257  IESLFQMLKPAILVLLEKGIKVVVLTLGSDGVFLCSKEGPGFMNNVLKGTKPQGFGSQLY 316

Query: 816  EMVTVNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPIVRLTGAGDCLVGGTVASICAGLD 637
            E++T +CPSN F  +      K+  +AVH P+LP  + RLTGAGDCLVGGT+AS+CAGLD
Sbjct: 317  EIITESCPSNLF-LNIATSSSKTYPFAVHLPALPASVARLTGAGDCLVGGTLASMCAGLD 375

Query: 636  VMQSMAVGIXXXXXAIQVETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 484
            V+QS+A GI     A++ ETNVPS Y L+ +A+DAR + S AKV+    +L
Sbjct: 376  VLQSVAAGIAAAKAAVEGETNVPSEYSLAKIADDARRVCSSAKVISHRSML 426


>ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]
            gi|85719355|gb|ABC75360.1| Carbohydrate kinase, PfkB
            [Medicago truncatula] gi|355508944|gb|AES90086.1| Sugar
            kinase, putative [Medicago truncatula]
          Length = 421

 Score =  418 bits (1074), Expect = e-114
 Identities = 209/351 (59%), Positives = 272/351 (77%)
 Frame = -3

Query: 1536 GVARNVAECMSKLGAKPFMISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNL 1357
            GVARNVAECMSKLGAKP+MIS +G DMAGNLL+E+WK+AGLSTEGI K +DI TPVVCN+
Sbjct: 72   GVARNVAECMSKLGAKPYMISALGFDMAGNLLLEHWKTAGLSTEGILKNKDIETPVVCNI 131

Query: 1356 FDTNGELTAAVASVEAIEKYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAES 1177
            FD NGE+ A VASVEA+EKYLT +WI  F  ++  APVLM+DANL+  SLEASCK+AA++
Sbjct: 132  FDVNGEVAAGVASVEALEKYLTPDWILCFKSTLLYAPVLMVDANLSGPSLEASCKMAADT 191

Query: 1176 NIPVWFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQS 997
              PVWFEPVSVTKS+R+ S+A YVTF SPNEDELIAMANA+S  + F P++        S
Sbjct: 192  GCPVWFEPVSVTKSQRIRSVAKYVTFASPNEDELIAMANALSGSNEFRPLKEDHKKDNLS 251

Query: 996  IEGLFHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLF 817
               LF +LKPAVLVLL KG+K+V+VTLG++GVF+C+K GP   K  + KT  +  G +L+
Sbjct: 252  PGSLFQILKPAVLVLLGKGIKVVLVTLGSNGVFLCSKGGPSCYKFPVAKTNRTGFGGQLY 311

Query: 816  EMVTVNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPIVRLTGAGDCLVGGTVASICAGLD 637
            + V  NCP N ++  ++ +   ++L+AVH PSLP  +VRLTGAGDCLVGGT+ SICAGLD
Sbjct: 312  KSVMQNCPPNCYSGFSELD-ISNRLFAVHLPSLPASVVRLTGAGDCLVGGTLTSICAGLD 370

Query: 636  VMQSMAVGIXXXXXAIQVETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 484
            +MQS++VGI     A++VETNVPS + L+++A+DAR ++  AKV+  + ++
Sbjct: 371  IMQSVSVGIAVAKAAVEVETNVPSAFSLASIADDARSVFCHAKVLLQQSMM 421


>ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|222849054|gb|EEE86601.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  417 bits (1071), Expect = e-114
 Identities = 211/352 (59%), Positives = 273/352 (77%), Gaps = 1/352 (0%)
 Frame = -3

Query: 1536 GVARNVAECMSKLGAKPFMISIIGHDMAGNLLMEYWKSAGLSTE-GIEKRQDIGTPVVCN 1360
            GVARN+AECMSKLG KP+MIS +G+DMAG LL+E+W SA LSTE GI K QDI TPV+CN
Sbjct: 36   GVARNIAECMSKLGTKPYMISALGNDMAGKLLLEHWNSASLSTEVGIMKHQDIKTPVICN 95

Query: 1359 LFDTNGELTAAVASVEAIEKYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAE 1180
            +FDT GEL AAVASVEA+EK+LT  WIQ+   +I  APV+M+DANL+  +LEASC++AAE
Sbjct: 96   IFDTEGELAAAVASVEAVEKFLTSSWIQQSKQNIFCAPVMMVDANLSLPALEASCQLAAE 155

Query: 1179 SNIPVWFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQ 1000
            SN PVWFEPVSV KS+R+ S+A YVTF SPNEDELIAMANA+S ++ F  ++     S+ 
Sbjct: 156  SNTPVWFEPVSVAKSRRIVSVAKYVTFASPNEDELIAMANALSHENMFRHIERD-SNSRC 214

Query: 999  SIEGLFHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRL 820
            S+E LF  LKPA+LVLLEKG+KIV VTLGADGVF+C++ GP  ++  L +TK      +L
Sbjct: 215  SVESLFQFLKPAILVLLEKGIKIVAVTLGADGVFLCSR-GPNVVRFSLDRTKKYGVSGQL 273

Query: 819  FEMVTVNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPIVRLTGAGDCLVGGTVASICAGL 640
            ++ V  +CPS++F+   + E R S L++VHFP+LP  +VRLTGAGDCLVGGT+AS+C+GL
Sbjct: 274  YDKVVSSCPSSRFSGALQIE-RSSHLFSVHFPALPASVVRLTGAGDCLVGGTLASLCSGL 332

Query: 639  DVMQSMAVGIXXXXXAIQVETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 484
            D+MQS+AVGI     A++ E NVPS + L+T+ +DAR IYS AK+   + +L
Sbjct: 333  DIMQSIAVGIAAAKSAVEGEANVPSEFSLATITDDARSIYSAAKIPFHQSML 384


>ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycine max]
          Length = 390

 Score =  412 bits (1060), Expect = e-113
 Identities = 209/351 (59%), Positives = 264/351 (75%)
 Frame = -3

Query: 1536 GVARNVAECMSKLGAKPFMISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNL 1357
            GVARNVAECMSKLGAKP+MIS +G DMAGNLL+  WKSAGLS EGI K +DI TPVVCN+
Sbjct: 42   GVARNVAECMSKLGAKPYMISALGFDMAGNLLLNQWKSAGLSIEGILKDKDIETPVVCNI 101

Query: 1356 FDTNGELTAAVASVEAIEKYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAES 1177
            FD NGE+ A VASVEA EKYLT +WI +F  ++ SAPVLM+DANL+  SLEA+CK+A + 
Sbjct: 102  FDVNGEVAAGVASVEAFEKYLTPDWIFRFKNTLLSAPVLMVDANLSHPSLEAACKMAIDM 161

Query: 1176 NIPVWFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQS 997
              PVWFEPVSVTKS+R++SI  YVTF SPNEDELIAMANA+S  D F P++ S+     S
Sbjct: 162  ECPVWFEPVSVTKSRRISSIVEYVTFASPNEDELIAMANALSGSDEFHPLKESQ-KKNIS 220

Query: 996  IEGLFHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLF 817
            +  LF MLKPA+ VLLEKG+K+V+VT G++GVF+C K  P   K    KT       +LF
Sbjct: 221  VLSLFQMLKPAIWVLLEKGIKVVLVTFGSNGVFLCNKGWPRQFKMPAEKTNQCGFRGQLF 280

Query: 816  EMVTVNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPIVRLTGAGDCLVGGTVASICAGLD 637
            + V   CP ++++  ++ + R S L+AVHFPSLP  +VRLTGAGDCLVGGT+ SICAGLD
Sbjct: 281  KTVMQKCPPSRYSGFSELD-RSSHLFAVHFPSLPASVVRLTGAGDCLVGGTLTSICAGLD 339

Query: 636  VMQSMAVGIXXXXXAIQVETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 484
            +MQS++VGI      ++VE NVPST+ LS + +DA+ +YS AKV+  + +L
Sbjct: 340  IMQSVSVGIAVAKAVVEVEANVPSTFSLSAITDDAKSVYSGAKVLFPQSML 390


>ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541748|gb|EEF43296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1157

 Score =  404 bits (1039), Expect = e-110
 Identities = 205/337 (60%), Positives = 256/337 (75%)
 Frame = -3

Query: 1536 GVARNVAECMSKLGAKPFMISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNL 1357
            GVARN+AECMSKLG KP+MIS +G+DMAGNLL+E+W SAGLSTEGI+K Q I T V+ N+
Sbjct: 79   GVARNIAECMSKLGTKPYMISALGNDMAGNLLLEHWNSAGLSTEGIQKHQKIRTAVISNI 138

Query: 1356 FDTNGELTAAVASVEAIEKYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAES 1177
            FD +GE+ A VA VEA+EK+LT EWI +  C ISSA VL++DANL P +LEASC++AAE 
Sbjct: 139  FDAHGEVAAGVADVEAVEKFLTPEWILQCKCKISSASVLLVDANLTPPALEASCQVAAEY 198

Query: 1176 NIPVWFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQS 997
            NIPVWFEPVSV KS R+ASI S VTF SPNEDELIAMANA+S    F P+       K S
Sbjct: 199  NIPVWFEPVSVAKSTRIASIVSDVTFASPNEDELIAMANALSCASIFHPIDRD-SSKKYS 257

Query: 996  IEGLFHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLF 817
             E LF MLKPA+LVLLEKG+K V VTLGA+GVF+C+ + P F +  L +TK       L+
Sbjct: 258  TESLFQMLKPAILVLLEKGIKTVAVTLGANGVFLCSTE-PNFTRTRLERTKKYGYNGSLY 316

Query: 816  EMVTVNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPIVRLTGAGDCLVGGTVASICAGLD 637
            +++  +CPS+KF+ D       S L AVHFP+LP  +VRLTGAGDCLVGGT+AS+C+GLD
Sbjct: 317  DIIESSCPSSKFS-DALQTQGSSHLLAVHFPTLPASVVRLTGAGDCLVGGTLASLCSGLD 375

Query: 636  VMQSMAVGIXXXXXAIQVETNVPSTYCLSTVAEDARL 526
            +MQSMAVGI     A++ E NVPS + L+++++DARL
Sbjct: 376  IMQSMAVGIVVAKTAVETEGNVPSAFSLASISDDARL 412