BLASTX nr result

ID: Coptis25_contig00012770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012770
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335142.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
gb|AFK39872.1| unknown [Lotus japonicus]                               95   7e-18
ref|XP_003625112.1| hypothetical protein MTR_7g091060 [Medicago ...    92   3e-17
ref|XP_002535277.1| conserved hypothetical protein [Ricinus comm...    92   4e-17
gb|AFK39184.1| unknown [Medicago truncatula]                           91   7e-17

>ref|XP_002335142.1| predicted protein [Populus trichocarpa] gi|222832945|gb|EEE71422.1|
           predicted protein [Populus trichocarpa]
          Length = 62

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/61 (78%), Positives = 54/61 (88%), Gaps = 3/61 (4%)
 Frame = +2

Query: 77  FASLAPKTKNIVVAGALTSFVFGVYFYTMRAVGGTDELQIAIDKFEDQKSKTES---LPS 247
           F+SLAPKTKN+VVAG L++FVFGVYFYTMRAVGGTDELQ AIDKFE QKSK ES   +PS
Sbjct: 2   FSSLAPKTKNLVVAGGLSAFVFGVYFYTMRAVGGTDELQTAIDKFEQQKSKEESEATIPS 61

Query: 248 R 250
           +
Sbjct: 62  K 62


>gb|AFK39872.1| unknown [Lotus japonicus]
          Length = 68

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/63 (74%), Positives = 50/63 (79%)
 Frame = +2

Query: 59  MSTFLSFASLAPKTKNIVVAGALTSFVFGVYFYTMRAVGGTDELQIAIDKFEDQKSKTES 238
           M+  L FASL PK KN VVAG LT+FVFG YFYTMRAVGGTDELQ+AIDKFE  KSK E 
Sbjct: 1   MAGVLGFASLPPKAKNFVVAGGLTAFVFGTYFYTMRAVGGTDELQVAIDKFEADKSKQEG 60

Query: 239 LPS 247
            PS
Sbjct: 61  EPS 63


>ref|XP_003625112.1| hypothetical protein MTR_7g091060 [Medicago truncatula]
           gi|355500127|gb|AES81330.1| hypothetical protein
           MTR_7g091060 [Medicago truncatula]
          Length = 78

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 3/70 (4%)
 Frame = +2

Query: 53  SRMSTFLSFASLAPKTKNIVVAGALTSFVFGVYFYTMRAVGGTDELQIAIDKFEDQKSKT 232
           ++M+  L ++ LAPKTKN +VAG LT+FVFG YFYTMRAVGGTDELQ+AIDKFE  KS  
Sbjct: 9   TKMAGVLGYSGLAPKTKNFIVAGGLTTFVFGAYFYTMRAVGGTDELQVAIDKFEADKSTK 68

Query: 233 E---SLPSRS 253
           E   S+PS++
Sbjct: 69  EGESSIPSKA 78


>ref|XP_002535277.1| conserved hypothetical protein [Ricinus communis]
           gi|223523580|gb|EEF27106.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/54 (77%), Positives = 50/54 (92%)
 Frame = +2

Query: 77  FASLAPKTKNIVVAGALTSFVFGVYFYTMRAVGGTDELQIAIDKFEDQKSKTES 238
           + +LAPKTKN++VAG LT+FVFGVYFYTMRAVGGTDELQ+AIDK+E QKSK E+
Sbjct: 7   YRNLAPKTKNLIVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDKYEGQKSKQEA 60


>gb|AFK39184.1| unknown [Medicago truncatula]
          Length = 68

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 3/68 (4%)
 Frame = +2

Query: 59  MSTFLSFASLAPKTKNIVVAGALTSFVFGVYFYTMRAVGGTDELQIAIDKFEDQKSKTE- 235
           M+  L ++ LAPKTKN +VAG LT+FVFG YFYTMRAVGGTDELQ+AIDKFE  KS  E 
Sbjct: 1   MAGVLGYSGLAPKTKNFIVAGGLTTFVFGAYFYTMRAVGGTDELQVAIDKFEADKSTKEG 60

Query: 236 --SLPSRS 253
             S+PS++
Sbjct: 61  ESSIPSKA 68


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