BLASTX nr result

ID: Coptis25_contig00012760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012760
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277744.1| PREDICTED: red chlorophyll catabolite reduct...   315   1e-83
emb|CAJ80766.1| red chlorophyll catabolite reductase [Solanum ly...   305   2e-80
emb|CAN61781.1| hypothetical protein VITISV_028662 [Vitis vinifera]   298   1e-78
ref|XP_003544619.1| PREDICTED: red chlorophyll catabolite reduct...   295   1e-77
gb|ACU23013.1| unknown [Glycine max]                                  295   1e-77

>ref|XP_002277744.1| PREDICTED: red chlorophyll catabolite reductase, chloroplastic [Vitis
            vinifera] gi|296082425|emb|CBI21430.3| unnamed protein
            product [Vitis vinifera]
          Length = 322

 Score =  315 bits (808), Expect = 1e-83
 Identities = 164/322 (50%), Positives = 220/322 (68%), Gaps = 11/322 (3%)
 Frame = -2

Query: 1142 MVVLVPQFLQPPFSSYAPPSRRSNFKMVR--------TCISSSSSSMDAQTK--RPGFLE 993
            M V+   FL PP     P SR ++   V            SSS S  D Q    R  F+E
Sbjct: 1    MAVVASHFLLPPLCLPPPSSRTASHYSVSPKRPPPIMAASSSSPSLTDPQYGGGRSRFME 60

Query: 992  FPYLSTPHRNLMLELVSKIETXXXXXXXXXXXXPDVQYFQNESGSSQGTIHIQSGNEDSM 813
            FP++S PHR+LM+ELVS +E             PDVQY++N+SG++Q T+H++SG++ S 
Sbjct: 61   FPHVSAPHRDLMVELVSAVEARLDSYLLPCTLPPDVQYYENQSGTAQATLHVRSGHDSSP 120

Query: 812  VDFILGSWIHSKLPTG-ELNITTLTAYLNKKTDAPRFLLEFIQSSPTSLILLLDLPHRKD 636
            +DF+LGSWIH +LP+G  LNIT+L+ YLN  TDAP FL+E I+SSPTSL+L+LDLP RKD
Sbjct: 121  IDFVLGSWIHCQLPSGGALNITSLSTYLNPSTDAPNFLIELIRSSPTSLVLILDLPPRKD 180

Query: 635  LILNPNYLTTFYMDTQLDHLRQQLEKIPETRPYLPSSLYIRCALSPTAVSIRIDCGPTGS 456
            L L+P+YL TFY DT+L+  RQ LEKIPE++PY  SSLYIRC +SPTA+  RI+    G 
Sbjct: 181  LALHPDYLQTFYEDTKLESRRQLLEKIPESQPYFSSSLYIRCIVSPTAIMTRIETEAGGV 240

Query: 455  GRIDEVIRDHVSPVAKQMLDIWLYKCAYGKRELMEEEIIDLEKRDALVNKKTLDIDLASG 276
             R++E+++ HV PVA ++L IWL +CA+G+RE+ + EI  LEKRD L+  KT++IDL S 
Sbjct: 241  ERMEEILQSHVGPVAMEVLGIWLDQCAFGEREVGDSEISYLEKRDRLIRSKTIEIDLGSS 300

Query: 275  LPRLFGQDVANRVIEPLEKYFK 210
            LPRLFG + A RV+E +   FK
Sbjct: 301  LPRLFGPETAGRVLEAMRGVFK 322


>emb|CAJ80766.1| red chlorophyll catabolite reductase [Solanum lycopersicum]
          Length = 313

 Score =  305 bits (780), Expect = 2e-80
 Identities = 156/297 (52%), Positives = 205/297 (69%), Gaps = 2/297 (0%)
 Frame = -2

Query: 1091 PPSRRSNFKM-VRTCISSSSSSMDAQTKRPGFLEFPYLSTPHRNLMLELVSKIETXXXXX 915
            P S   +F +  R C SSSS+SM+    +  F EFPY S PHR LM+ELVS +E      
Sbjct: 19   PSSSSRSFSVGKRFCCSSSSTSMEHHESK--FKEFPYASVPHRELMVELVSTVENRLGES 76

Query: 914  XXXXXXXPDVQYFQNESGSSQGTIHIQSGNEDSMVDFILGSWIHSKLPTG-ELNITTLTA 738
                     VQYF+NES ++  +++++SGN  S VDFILGSW+H  LPTG  LNIT+L+ 
Sbjct: 77   LLPCTLPSHVQYFENESATAHASLYVRSGNSSSQVDFILGSWVHCNLPTGGALNITSLSV 136

Query: 737  YLNKKTDAPRFLLEFIQSSPTSLILLLDLPHRKDLILNPNYLTTFYMDTQLDHLRQQLEK 558
            YL   TDAP FL+E IQSSPT+LIL+LDLP RKDL+ +P+YL TFY +TQLD  RQ LEK
Sbjct: 137  YLRPSTDAPNFLIEVIQSSPTTLILILDLPPRKDLVQHPDYLKTFYEETQLDKQRQLLEK 196

Query: 557  IPETRPYLPSSLYIRCALSPTAVSIRIDCGPTGSGRIDEVIRDHVSPVAKQMLDIWLYKC 378
            +PE +PY  SSLYIR  +SP+A+ + I+  P+ + RIDE+I+DH+SPVAK MLD WL  C
Sbjct: 197  LPEVKPYFSSSLYIRALVSPSAILVSIETDPSQAIRIDEIIQDHISPVAKVMLDTWLNLC 256

Query: 377  AYGKRELMEEEIIDLEKRDALVNKKTLDIDLASGLPRLFGQDVANRVIEPLEKYFKA 207
            A  +R L ++E  DL KRD ++  KT++IDL S  PRLFGQ VAN+V+  L + + +
Sbjct: 257  ACTERRLTDDESKDLAKRDQIIKNKTIEIDLESSFPRLFGQQVANQVLGVLREIYNS 313


>emb|CAN61781.1| hypothetical protein VITISV_028662 [Vitis vinifera]
          Length = 359

 Score =  298 bits (764), Expect = 1e-78
 Identities = 166/359 (46%), Positives = 220/359 (61%), Gaps = 48/359 (13%)
 Frame = -2

Query: 1142 MVVLVPQFLQPPFSSYAPPSRRSNFKMVR--------TCISSSSSSMDAQTK--RPGFLE 993
            M V+   FL PP     P SR ++   V            SSS S  D Q    R  F+E
Sbjct: 1    MAVVASHFLLPPLCLPPPSSRTASHYSVSPKRPPPIMAASSSSPSLTDPQYGGGRSRFME 60

Query: 992  FPYLSTPHRNLMLELVSKIETXXXXXXXXXXXXPDVQYFQNESGSSQGTIHIQSGNEDSM 813
            FP++S PHR+LM+ELVS +E             PDVQY++N+SG++Q T+H++SG + S 
Sbjct: 61   FPHVSAPHRDLMVELVSAVEARLDSYLLPCTLPPDVQYYENQSGTAQATLHVRSGXDSSP 120

Query: 812  V-------------------------------------DFILGSWIHSKLPTG-ELNITT 747
            V                                     DF+LGSWIH +LP+G  LNIT+
Sbjct: 121  VSIYSTTAIFIHLIVNIFAQDEQLGMELSEPGSTLNKIDFVLGSWIHCQLPSGGALNITS 180

Query: 746  LTAYLNKKTDAPRFLLEFIQSSPTSLILLLDLPHRKDLILNPNYLTTFYMDTQLDHLRQQ 567
            L+ YLN  TDAP FL+E I+SSPTSL+L+LDLP RKDL L+P+YL TFY DT+L+  RQ 
Sbjct: 181  LSTYLNPSTDAPNFLIELIRSSPTSLVLILDLPPRKDLALHPDYLQTFYEDTKLESRRQL 240

Query: 566  LEKIPETRPYLPSSLYIRCALSPTAVSIRIDCGPTGSGRIDEVIRDHVSPVAKQMLDIWL 387
            LEKIPE++PY  SSLYIRC +SPTA+  RI+    G  R++E+++ HV PVAK++L IWL
Sbjct: 241  LEKIPESQPYFSSSLYIRCIVSPTAJMTRIETEAGGVERMEEILQSHVGPVAKEVLGIWL 300

Query: 386  YKCAYGKRELMEEEIIDLEKRDALVNKKTLDIDLASGLPRLFGQDVANRVIEPLEKYFK 210
             +CA+G+RE+ + EI  LEKRD L+  KT++IDL S LPRLFG + A RV+E +   FK
Sbjct: 301  DQCAFGEREVGDSEISYLEKRDRLIRSKTIEIDLGSSLPRLFGPETAGRVLEAMRGVFK 359


>ref|XP_003544619.1| PREDICTED: red chlorophyll catabolite reductase, chloroplastic-like
            [Glycine max]
          Length = 322

 Score =  295 bits (756), Expect = 1e-77
 Identities = 151/322 (46%), Positives = 215/322 (66%), Gaps = 4/322 (1%)
 Frame = -2

Query: 1166 CELTKYTQMVVLVPQFLQPP---FSSYAPPSRRSNFKMVRTCISSSSSSMDAQTKRPGFL 996
            CE  +Y+ +  L   F  PP   +  Y P S  S+F +  +C    +        R  F+
Sbjct: 3    CEHFRYSPLSFL--SFSSPPSTRYHLYIPSSSSSSFSV--SCSLMENQETHNNQGRSKFM 58

Query: 995  EFPYLSTPHRNLMLELVSKIETXXXXXXXXXXXXPDVQYFQNESGSSQGTIHIQSGNEDS 816
            +FP++S+  +NLM++LVS +E              DVQY+Q+++ ++Q ++HI++ + DS
Sbjct: 59   DFPFVSSAQKNLMVDLVSTLENRFHTQLLPCTLPSDVQYYQSQTATAQASLHIRAAHNDS 118

Query: 815  MVDFILGSWIHSKLPTG-ELNITTLTAYLNKKTDAPRFLLEFIQSSPTSLILLLDLPHRK 639
             +DF+LGSW+HS+LPTG  L+IT+L+AYLN  TDAP F+ E I+SSPT L+L+LDLP RK
Sbjct: 119  PIDFVLGSWVHSELPTGGSLDITSLSAYLNSSTDAPNFVFEMIRSSPTMLLLILDLPPRK 178

Query: 638  DLILNPNYLTTFYMDTQLDHLRQQLEKIPETRPYLPSSLYIRCALSPTAVSIRIDCGPTG 459
            DL+L P+ L TFY DTQLD  RQ LE++PE +PY  SSLYIR   SPTA+ +R+     G
Sbjct: 179  DLVLWPDDLKTFYEDTQLDKHRQTLERVPEVQPYFSSSLYIRTVSSPTAIMVRVLTENGG 238

Query: 458  SGRIDEVIRDHVSPVAKQMLDIWLYKCAYGKRELMEEEIIDLEKRDALVNKKTLDIDLAS 279
              R++E+IRDH+ P++KQ+L IWL  CA  KRE+ E E   L+KRD L+  KT++IDL S
Sbjct: 239  VERMEEIIRDHLDPISKQVLGIWLDHCACAKREVGEAERAYLKKRDGLIRNKTIEIDLGS 298

Query: 278  GLPRLFGQDVANRVIEPLEKYF 213
              PRLFG +VANRV+E +++YF
Sbjct: 299  SFPRLFGPEVANRVLEAIKEYF 320


>gb|ACU23013.1| unknown [Glycine max]
          Length = 322

 Score =  295 bits (756), Expect = 1e-77
 Identities = 151/322 (46%), Positives = 215/322 (66%), Gaps = 4/322 (1%)
 Frame = -2

Query: 1166 CELTKYTQMVVLVPQFLQPP---FSSYAPPSRRSNFKMVRTCISSSSSSMDAQTKRPGFL 996
            CE  +Y+ +  L   F  PP   +  Y P S  S+F +  +C    +        R  F+
Sbjct: 3    CEHFRYSPLSFL--SFSSPPSTRYHLYIPSSSSSSFSV--SCSLMENQETHNNQGRSKFM 58

Query: 995  EFPYLSTPHRNLMLELVSKIETXXXXXXXXXXXXPDVQYFQNESGSSQGTIHIQSGNEDS 816
            +FP++S+  +NLM++LVS +E              DVQY+Q+++ ++Q ++HI++ + DS
Sbjct: 59   DFPFVSSAQKNLMVDLVSTLENRFHTQLLPCTLPSDVQYYQSQTATAQASLHIRAAHNDS 118

Query: 815  MVDFILGSWIHSKLPTG-ELNITTLTAYLNKKTDAPRFLLEFIQSSPTSLILLLDLPHRK 639
             +DF+LGSW+HS+LPTG  L+IT+L+AYLN  TDAP F+ E I+SSPT L+L+LDLP RK
Sbjct: 119  PIDFVLGSWVHSELPTGGSLDITSLSAYLNSSTDAPNFVFEMIRSSPTMLLLILDLPPRK 178

Query: 638  DLILNPNYLTTFYMDTQLDHLRQQLEKIPETRPYLPSSLYIRCALSPTAVSIRIDCGPTG 459
            DL+L P+ L TFY DTQLD  RQ LE++PE +PY  SSLYIR   SPTA+ +R+     G
Sbjct: 179  DLVLWPDDLKTFYEDTQLDKHRQTLERVPEVQPYFSSSLYIRTVSSPTAIMVRVLTENGG 238

Query: 458  SGRIDEVIRDHVSPVAKQMLDIWLYKCAYGKRELMEEEIIDLEKRDALVNKKTLDIDLAS 279
              R++E+IRDH+ P++KQ+L IWL  CA  KRE+ E E   L+KRD L+  KT++IDL S
Sbjct: 239  VERMEEIIRDHLDPISKQVLGIWLDHCACAKREVGEAERAYLKKRDGLITNKTIEIDLGS 298

Query: 278  GLPRLFGQDVANRVIEPLEKYF 213
              PRLFG +VANRV+E +++YF
Sbjct: 299  SFPRLFGPEVANRVLEAIKEYF 320


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