BLASTX nr result

ID: Coptis25_contig00012756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012756
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272805.2| PREDICTED: uncharacterized calcium-binding p...   202   7e-50
emb|CAN73520.1| hypothetical protein VITISV_031604 [Vitis vinifera]   194   1e-47
emb|CBI28273.3| unnamed protein product [Vitis vinifera]              187   3e-45
ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|2...   180   3e-43
ref|XP_003522522.1| PREDICTED: uncharacterized calcium-binding p...   176   5e-42

>ref|XP_002272805.2| PREDICTED: uncharacterized calcium-binding protein At1g02270-like
           [Vitis vinifera]
          Length = 439

 Score =  202 bits (514), Expect = 7e-50
 Identities = 104/203 (51%), Positives = 138/203 (67%), Gaps = 2/203 (0%)
 Frame = -3

Query: 801 DSDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXKESFIEAVLGNIKTHLSEESVES 622
           D D D++KW+SHRNHRGN+C VDFIW           KESF+EA+LGNI   L + S  S
Sbjct: 240 DIDEDSHKWISHRNHRGNVCGVDFIWLLNPNKHRKPLKESFMEALLGNITNLLQKASTGS 299

Query: 621 ADQIHVLRTKFNNSNYITYSQFCQSLIKLGLTSNCPYGLSDEEIKDLWDYVDTDRDGVID 442
            D +H       + +YITYSQFCQ+L KLG+  +    L +E+ K LW+++DTDR+GVID
Sbjct: 300 VDPLHFFEM---DGSYITYSQFCQALAKLGVCGSSHSDLCNEDTKKLWEHLDTDRNGVID 356

Query: 441 LSQFNTMSS--PSFQQREDKSEDTEIQEEILPDKSKISTTIGFDVKNAVLFPPEVEHGMW 268
           L Q++   +  PS  Q+ED  E+    +E+  + S  +T IGF+VKNA+LFPPEVE GMW
Sbjct: 357 LLQYSRAENLHPSLLQKEDTEENGGQIKEMF-NTSTSTTMIGFNVKNAMLFPPEVEKGMW 415

Query: 267 PEYYSLSDHAHLTVEFAPMMIHC 199
           PE YSLSDHAHLTVEF+ + ++C
Sbjct: 416 PENYSLSDHAHLTVEFSLVEMNC 438


>emb|CAN73520.1| hypothetical protein VITISV_031604 [Vitis vinifera]
          Length = 435

 Score =  194 bits (494), Expect = 1e-47
 Identities = 102/203 (50%), Positives = 137/203 (67%), Gaps = 2/203 (0%)
 Frame = -3

Query: 801 DSDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXKESFIEAVLGNIKTHLSEESVES 622
           D D D++KW+SHRNHRGN+C VDFIW           KESF+EA+LGNI    ++ S  S
Sbjct: 240 DIDEDSHKWISHRNHRGNVCGVDFIWLLNPNKHRKPLKESFMEALLGNI----TKASTGS 295

Query: 621 ADQIHVLRTKFNNSNYITYSQFCQSLIKLGLTSNCPYGLSDEEIKDLWDYVDTDRDGVID 442
            D +H       + +YITYSQFCQ+L KLG+  +    L +E+ K LW+++DTDR+GVID
Sbjct: 296 VDPLHFFEM---DGSYITYSQFCQALAKLGVCGSSHSDLCNEDTKKLWEHLDTDRNGVID 352

Query: 441 LSQFNTMSS--PSFQQREDKSEDTEIQEEILPDKSKISTTIGFDVKNAVLFPPEVEHGMW 268
           L Q++   +  P   Q+ED  E+    +E+  + S  +T IGF+VKNA+LFPPEVE GMW
Sbjct: 353 LLQYSRAENLYPLLLQKEDTEENGGQIKEMF-NTSTSTTMIGFNVKNAMLFPPEVEKGMW 411

Query: 267 PEYYSLSDHAHLTVEFAPMMIHC 199
           PE YSLSDHAHLTVEF+ + ++C
Sbjct: 412 PENYSLSDHAHLTVEFSLVEMNC 434


>emb|CBI28273.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  187 bits (474), Expect = 3e-45
 Identities = 98/195 (50%), Positives = 127/195 (65%)
 Frame = -3

Query: 801 DSDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXKESFIEAVLGNIKTHLSEESVES 622
           D D D++KW+SHRNHRGN+C VDFIW           KESF+EA+LGNI   L + S  S
Sbjct: 240 DIDEDSHKWISHRNHRGNVCGVDFIWLLNPNKHRKPLKESFMEALLGNITNLLQKASTGS 299

Query: 621 ADQIHVLRTKFNNSNYITYSQFCQSLIKLGLTSNCPYGLSDEEIKDLWDYVDTDRDGVID 442
            D +H       + +YITYSQFCQ+L KLG+  +    L +E+ K LW+++DTDR+G + 
Sbjct: 300 VDPLHFFEM---DGSYITYSQFCQALAKLGVCGSSHSDLCNEDTKKLWEHLDTDRNGNLH 356

Query: 441 LSQFNTMSSPSFQQREDKSEDTEIQEEILPDKSKISTTIGFDVKNAVLFPPEVEHGMWPE 262
                    PS  Q+ED  E+    +E+  + S  +T IGF+VKNA+LFPPEVE GMWPE
Sbjct: 357 ---------PSLLQKEDTEENGGQIKEMF-NTSTSTTMIGFNVKNAMLFPPEVEKGMWPE 406

Query: 261 YYSLSDHAHLTVEFA 217
            YSLSDHAHLTVEF+
Sbjct: 407 NYSLSDHAHLTVEFS 421


>ref|XP_002317830.1| predicted protein [Populus trichocarpa] gi|222858503|gb|EEE96050.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  180 bits (457), Expect = 3e-43
 Identities = 101/201 (50%), Positives = 129/201 (64%), Gaps = 1/201 (0%)
 Frame = -3

Query: 798 SDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXKESFIEAVLGNIKTHLSEESVESA 619
           +DADA+KWVSH NHRGNIC VDFIW           K S+ EAV G  K  L   S+   
Sbjct: 254 TDADAHKWVSHLNHRGNICGVDFIWLLNPNRYRKLLKTSWSEAVFGMFKYLLRRASLTEE 313

Query: 618 DQIHVLRTKFNNSNYITYSQFCQSLIKLGLTSNCPYGLSDEEIKDLWDYVDTDRDGVIDL 439
           D    L+   ++S+ ITYS FC++L +L LT +C YGLSDEE KDLW   D D +GV+D 
Sbjct: 314 DAFAFLKAD-SDSDCITYSGFCEALQQLNLTGHC-YGLSDEETKDLWVQADIDGNGVLDY 371

Query: 438 SQFNT-MSSPSFQQREDKSEDTEIQEEILPDKSKISTTIGFDVKNAVLFPPEVEHGMWPE 262
            +F   + +P++ + +D     EIQ++ L  K +   TIGF V+NAVLFPPEVE GMWPE
Sbjct: 372 KEFQQRIWNPTWSEEKDD----EIQDDNL--KGREEQTIGFSVENAVLFPPEVEKGMWPE 425

Query: 261 YYSLSDHAHLTVEFAPMMIHC 199
            YSLSDHA LTV F+P+ + C
Sbjct: 426 NYSLSDHARLTVVFSPIRMPC 446


>ref|XP_003522522.1| PREDICTED: uncharacterized calcium-binding protein At1g02270-like
           [Glycine max]
          Length = 450

 Score =  176 bits (446), Expect = 5e-42
 Identities = 101/207 (48%), Positives = 126/207 (60%), Gaps = 7/207 (3%)
 Frame = -3

Query: 798 SDADANKWVSHRNHRGNICAVDFIWXXXXXXXXXXXKESFIEAVLGNIKTHLSEESVESA 619
           +DADA+KWVSHRNHRGNICAVDFIW           K S+ EAV G  K  L    +  +
Sbjct: 252 TDADAHKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFKYLLRRAILTES 311

Query: 618 DQIHVLRTKFNNSNYITYSQFCQSLIKLGLTSNCPYGLSDEEIKDLWDYVDTDRDGVID- 442
           D    L  K +N + ITYS FC++L +L LT +C +GLSDEEIKDLW   D D +GV+D 
Sbjct: 312 DAFAFL--KVDNEDCITYSGFCEALKQLSLTGHC-HGLSDEEIKDLWVQADVDGNGVLDY 368

Query: 441 ---LSQFNTMSSPSFQQREDKSED---TEIQEEILPDKSKISTTIGFDVKNAVLFPPEVE 280
              L Q  + ++P     ++  +D    + QE+          TIGF VKNAVLFPPEVE
Sbjct: 369 KKFLQQIWSSTAPDIDDNKNGDQDDGSNDAQEQ----------TIGFSVKNAVLFPPEVE 418

Query: 279 HGMWPEYYSLSDHAHLTVEFAPMMIHC 199
            G WPE YSLSDHA LTV F+P+ + C
Sbjct: 419 KGRWPEDYSLSDHARLTVVFSPIRMPC 445


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