BLASTX nr result

ID: Coptis25_contig00012741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012741
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [...   162   5e-38
emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]   160   1e-37
ref|XP_002521429.1| conserved hypothetical protein [Ricinus comm...   159   4e-37
ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|2...   158   7e-37
ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|2...   158   9e-37

>ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 295

 Score =  162 bits (410), Expect = 5e-38
 Identities = 81/117 (69%), Positives = 92/117 (78%)
 Frame = -2

Query: 353 MDFSSLNRGQIILLGTSSCXXXXXXXXXXXXLQHLSNWTNPKEQKAIVIIILMAPIYAVV 174
           MD S+++RGQ+ LLG++ C             QHL  W NPKEQKAI+II+LMAPIYAV 
Sbjct: 1   MDISTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIVLMAPIYAVD 60

Query: 173 SFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSFLNISISKNIVPDGIKGR 3
           SFVGL+DF GS  FF  LESIKECYEALVIAKFLAL+YS+LNISISKNIVPDGIKGR
Sbjct: 61  SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGR 117


>emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]
          Length = 295

 Score =  160 bits (406), Expect = 1e-37
 Identities = 81/117 (69%), Positives = 91/117 (77%)
 Frame = -2

Query: 353 MDFSSLNRGQIILLGTSSCXXXXXXXXXXXXLQHLSNWTNPKEQKAIVIIILMAPIYAVV 174
           MD S+++RGQ+ LLG++ C             QHL  W NPKEQKAI+II LMAPIYAV 
Sbjct: 1   MDJSTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIXLMAPIYAVD 60

Query: 173 SFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSFLNISISKNIVPDGIKGR 3
           SFVGL+DF GS  FF  LESIKECYEALVIAKFLAL+YS+LNISISKNIVPDGIKGR
Sbjct: 61  SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGR 117


>ref|XP_002521429.1| conserved hypothetical protein [Ricinus communis]
           gi|223539328|gb|EEF40919.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  159 bits (402), Expect = 4e-37
 Identities = 81/117 (69%), Positives = 91/117 (77%)
 Frame = -2

Query: 353 MDFSSLNRGQIILLGTSSCXXXXXXXXXXXXLQHLSNWTNPKEQKAIVIIILMAPIYAVV 174
           MD S+LNRGQ+ L+G++ C             QHL  W NPKEQKAI+IIILMAPIYA+ 
Sbjct: 1   MDISTLNRGQLTLMGSAFCTMLSMHFTVQLLSQHLFYWKNPKEQKAILIIILMAPIYAID 60

Query: 173 SFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSFLNISISKNIVPDGIKGR 3
           SFVGL+D  GS  FF FL+SIKECYEALVIAKFLALMYS+LNISISKNIVPD IKGR
Sbjct: 61  SFVGLLDIRGSKAFFMFLDSIKECYEALVIAKFLALMYSYLNISISKNIVPDEIKGR 117


>ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|222859714|gb|EEE97261.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  158 bits (400), Expect = 7e-37
 Identities = 79/117 (67%), Positives = 92/117 (78%)
 Frame = -2

Query: 353 MDFSSLNRGQIILLGTSSCXXXXXXXXXXXXLQHLSNWTNPKEQKAIVIIILMAPIYAVV 174
           MDFS+++RGQI LLG + C             QHL  W NPKEQKAI+IIILMAPIYAV 
Sbjct: 1   MDFSNMDRGQITLLGCAFCVLLTLLFTVQLLSQHLFYWKNPKEQKAIIIIILMAPIYAVD 60

Query: 173 SFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSFLNISISKNIVPDGIKGR 3
           SFVGL++F GS  FFTFL+S+KECYEALVIAKFL+L+YS+L ISISKNIVPD +KGR
Sbjct: 61  SFVGLLNFQGSEAFFTFLDSVKECYEALVIAKFLSLLYSYLKISISKNIVPDEVKGR 117


>ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|222848628|gb|EEE86175.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  158 bits (399), Expect = 9e-37
 Identities = 79/118 (66%), Positives = 90/118 (76%)
 Frame = -2

Query: 356 IMDFSSLNRGQIILLGTSSCXXXXXXXXXXXXLQHLSNWTNPKEQKAIVIIILMAPIYAV 177
           +MDFSS++RGQI LLG   C             QH+  W NPKEQKAI+IIILMAPIYA 
Sbjct: 1   MMDFSSMDRGQITLLGCGFCVLLSLHFTVQLLSQHIFYWKNPKEQKAIIIIILMAPIYAA 60

Query: 176 VSFVGLVDFMGSATFFTFLESIKECYEALVIAKFLALMYSFLNISISKNIVPDGIKGR 3
            S+VGL+D  GS  FFTFL+S+KECYEALVIAKFLALMYS+L ISISKNIVPD +KGR
Sbjct: 61  DSYVGLLDIQGSKAFFTFLDSVKECYEALVIAKFLALMYSYLKISISKNIVPDEVKGR 118


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