BLASTX nr result

ID: Coptis25_contig00012729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012729
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...   102   2e-19
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                  97   8e-18
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-17
ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    93   8e-17
ref|XP_002301549.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16

>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score =  102 bits (253), Expect = 2e-19
 Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
 Frame = -3

Query: 941 KCVRLVATKLGGYAQVWWDEYQRGRTVKGKKLVQRWSKMKRALRKEFVLNNYERDLFNRL 762
           K V LVA KL   A  WWD+ +  R   GK+ V+ W KMK+ L+  F+  NYE+ L+N+ 
Sbjct: 278 KKVHLVALKLRAGASAWWDQLEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQTLYNQY 337

Query: 761 HNLQQNLSTVQEYTEAFNLLCTRLNITETEEFKVHRYVNGLQKRIQADLSFVDIQTMANA 582
            N +Q + TV EY E F+ L  R N++E E+ +V R+V GL+  I+  +     + ++ A
Sbjct: 338 QNCRQGVRTVAEYIEEFHRLSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEA 397

Query: 581 FTYAR--------KSEDLHKXXXXXXXXXXXXXXXXXST--------------------- 489
            ++A         +S++L++                 ST                     
Sbjct: 398 ISFAETVEEMIAIRSKNLNRRSAWETNSTKSKTNDQPSTSTKAKGKEIDNQEVAVERKKE 457

Query: 488 -IVHPVSAFSASR----KCFECGVIGHIAAECPKKKALFYSQEKEMT 363
               P    S SR    KCF CG  GH++  CP++K +  ++E   T
Sbjct: 458 QTFKPSGQNSYSRSSLGKCFRCGQTGHLSNNCPQRKTIAIAEEGGQT 504


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
 Frame = -3

Query: 965 EYKSISGVKCVRLVATKLGGYAQVWWDEYQRGRTVKGKKLVQRWSKMKRALRKEFVLNNY 786
           EYK+ + VK  ++   KL GYA +W+D  +  R  +GK  ++ WSK+K+ +  +FV  +Y
Sbjct: 118 EYKNYNDVKACKVAVLKLKGYASLWYDNLKHQRLKEGKDPLRSWSKLKKKMLAKFVTKDY 177

Query: 785 ERDLFNRLHNLQQNLSTVQEYTEAFNLLCTRLNITETEEFKVHRYVNGLQKRIQADLSFV 606
            +DLF +L NL+Q   TV+ Y   F  L  +  I E  E ++ R++ GL K I A++   
Sbjct: 178 TQDLFIKLSNLKQKEKTVEAYLREFEQLTLQCEINEKSEQRIARFLEGLDKNIAAEVRMQ 237

Query: 605 DIQTMANAFTYARKSEDLHKXXXXXXXXXXXXXXXXXSTIVHPVSAFSASR--------- 453
            + +  +    + + E + K                   I  P      S          
Sbjct: 238 PLWSYDDVVNLSLRVEKMGKTKPVATRPKPVFRPYSSVKINDPPKTTPQSTVDKGKAPMN 297

Query: 452 ------------KCFECGVIGHIAAECPKKKAL 390
                       KCF+C   GH   +CP  + L
Sbjct: 298 PKINPPLSRDKIKCFQCQGFGHFRKDCPSARTL 330


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 51/136 (37%), Positives = 80/136 (58%)
 Frame = -3

Query: 965 EYKSISGVKCVRLVATKLGGYAQVWWDEYQRGRTVKGKKLVQRWSKMKRALRKEFVLNNY 786
           E+K +   + V LVAT+L G A  WW + ++ RT++GK  +  W KMK+ +R  F+  NY
Sbjct: 115 EFKQVPEDRRVALVATRLRGRAGAWWQQVKKTRTLQGKGKITCWDKMKKNMRSAFLPYNY 174

Query: 785 ERDLFNRLHNLQQNLSTVQEYTEAFNLLCTRLNITETEEFKVHRYVNGLQKRIQADLSFV 606
            R L+ RL NL+Q   +V +YT  F  L +R  I E EE +V RY+  L+ + Q  L+  
Sbjct: 175 TRTLYQRLQNLRQGNRSVDDYTTEFYQLVSRDAIAEDEESRVVRYIGRLRIQFQDVLNMF 234

Query: 605 DIQTMANAFTYARKSE 558
           D+ ++++A   A + E
Sbjct: 235 DVLSVSDAHQRAVQLE 250


>ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101214124 [Cucumis sativus]
          Length = 586

 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 46/129 (35%), Positives = 75/129 (58%)
 Frame = -3

Query: 941 KCVRLVATKLGGYAQVWWDEYQRGRTVKGKKLVQRWSKMKRALRKEFVLNNYERDLFNRL 762
           K VRLVA KL G    WWD+ Q  R + GK+ ++ W KM R ++K F+  NY++ L+N+ 
Sbjct: 128 KKVRLVALKLQGGTSAWWDQLQNNRRLFGKQSIRSWPKMLRLMKKRFLPINYQQLLYNQY 187

Query: 761 HNLQQNLSTVQEYTEAFNLLCTRLNITETEEFKVHRYVNGLQKRIQADLSFVDIQTMANA 582
               Q   ++ +YTE F  L  R N+ ETE  ++ R+++GL+  I+  +    +  +++A
Sbjct: 188 QQCHQGSRSIMDYTEEFYRLGARNNLLETEHQQISRFIHGLRDEIKDIVHLHPLTFLSDA 247

Query: 581 FTYARKSED 555
            + A K ED
Sbjct: 248 ISLASKIED 256


>ref|XP_002301549.1| predicted protein [Populus trichocarpa] gi|222843275|gb|EEE80822.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 49/128 (38%), Positives = 77/128 (60%)
 Frame = -3

Query: 941 KCVRLVATKLGGYAQVWWDEYQRGRTVKGKKLVQRWSKMKRALRKEFVLNNYERDLFNRL 762
           K V+LVA +L G A  WW++ Q  R  + K +VQ W+KM+R LR +++  +YE+ LF + 
Sbjct: 7   KKVKLVAYRLMGGASAWWEQLQLTRMRQRKGMVQTWAKMRRLLRAKYLPLDYEQILFQQY 66

Query: 761 HNLQQNLSTVQEYTEAFNLLCTRLNITETEEFKVHRYVNGLQKRIQADLSFVDIQTMANA 582
            + +Q   TVQ Y E F+ L +R N++ET+  +V R+V GL   +Q  +S   I ++  A
Sbjct: 67  QDCRQGNRTVQTYVEEFHRLSSRNNLSETDAQQVSRFVGGLCLTVQDRVSMQTIYSLTEA 126

Query: 581 FTYARKSE 558
              A K+E
Sbjct: 127 INLATKAE 134


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