BLASTX nr result

ID: Coptis25_contig00012723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012723
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267234.1| PREDICTED: polynucleotide 5'-hydroxyl-kinase...    73   3e-11
emb|CAN74949.1| hypothetical protein VITISV_000264 [Vitis vinifera]    73   3e-11
ref|XP_002318622.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
gb|ABK93937.1| unknown [Populus trichocarpa]                           71   8e-11
emb|CAN65272.1| hypothetical protein VITISV_024535 [Vitis vinifera]    68   7e-10

>ref|XP_002267234.1| PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 [Vitis vinifera]
           gi|297734062|emb|CBI15309.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +3

Query: 132 IYIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFS 251
           IYIPEEWS AAE IAYDS+TSPPP+ ++CG KN GKTTFS
Sbjct: 14  IYIPEEWSEAAETIAYDSVTSPPPVALVCGAKNCGKTTFS 53


>emb|CAN74949.1| hypothetical protein VITISV_000264 [Vitis vinifera]
          Length = 286

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +3

Query: 132 IYIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFS 251
           IYIPEEWS AAE IAYDS+TSPPP+ ++CG KN GKTTFS
Sbjct: 14  IYIPEEWSEAAETIAYDSVTSPPPVALVCGAKNCGKTTFS 53


>ref|XP_002318622.1| predicted protein [Populus trichocarpa] gi|222859295|gb|EEE96842.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 4/51 (7%)
 Frame = +3

Query: 111 SMTETD----AIYIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFS 251
           S+TE +    +IYI EEWS AA+ +AYDS TSPPPI ++CGPKN GKTTFS
Sbjct: 3   SITEREEASPSIYISEEWSEAADSVAYDSTTSPPPIALVCGPKNCGKTTFS 53


>gb|ABK93937.1| unknown [Populus trichocarpa]
          Length = 375

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 4/51 (7%)
 Frame = +3

Query: 111 SMTETD----AIYIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFS 251
           S+TE +    +IYI EEWS AA+ +AYDS TSPPPI ++CGPKN GKTTFS
Sbjct: 3   SITEREEASPSIYISEEWSEAADSVAYDSTTSPPPIALVCGPKNCGKTTFS 53


>emb|CAN65272.1| hypothetical protein VITISV_024535 [Vitis vinifera]
          Length = 261

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +3

Query: 132 IYIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFS 251
           IYIPEEWS  AE IAYDS+TSPP + ++CG KN GKTTFS
Sbjct: 190 IYIPEEWSEGAETIAYDSVTSPPSVALVCGAKNCGKTTFS 229


Top