BLASTX nr result
ID: Coptis25_contig00012712
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012712
(1079 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264435.1| PREDICTED: probable FKBP-type peptidyl-proly... 197 2e-84
ref|XP_004137860.1| PREDICTED: peptidyl-prolyl cis-trans isomera... 194 6e-80
gb|AFK33664.1| unknown [Lotus japonicus] 193 1e-79
ref|XP_003542563.1| PREDICTED: LOW QUALITY PROTEIN: probable FKB... 193 3e-78
ref|XP_002322904.1| predicted protein [Populus trichocarpa] gi|2... 197 4e-78
>ref|XP_002264435.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
1, chloroplastic isoform 1 [Vitis vinifera]
gi|297740022|emb|CBI30204.3| unnamed protein product
[Vitis vinifera]
Length = 233
Score = 197 bits (501), Expect(2) = 2e-84
Identities = 94/103 (91%), Positives = 100/103 (97%)
Frame = -2
Query: 601 IHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGDSGRGAVLKGLDLGVEGMRVGGQRLLVV 422
+HYVAKWKGITFMTSRQGLGVGGGTPYGFDVG S RG+VLKGLDLGVEGM+VGGQRLL+V
Sbjct: 131 VHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGQSERGSVLKGLDLGVEGMKVGGQRLLIV 190
Query: 421 PPELAYGSKGVQEIPPNATIEVDVELLAIKQSPFGTGVKIVEG 293
PPELAYGSKGVQEIPPNATIE+DVELLAIKQSP GTGVKI+EG
Sbjct: 191 PPELAYGSKGVQEIPPNATIELDVELLAIKQSPLGTGVKIIEG 233
Score = 142 bits (359), Expect(2) = 2e-84
Identities = 75/108 (69%), Positives = 87/108 (80%), Gaps = 7/108 (6%)
Frame = -1
Query: 965 IPISR-----RNLTVVPCRCSSEVSSTNVAPP--SLRFDGRRALMGCFLAAAAGIYICDV 807
+PI+R RN +V+ C+CS S + P SL+ +GRRALMGC L AAAGIY+CDV
Sbjct: 23 LPITRKRSFKRNSSVLFCQCSFSSSDDSAKPATLSLQREGRRALMGCVLVAAAGIYVCDV 82
Query: 806 AGSVSTSRRALRGAKIPESEFTTLPNGLKYYDLKVGGGTKAVKGSRVA 663
AG+VSTSRRALRGAKIPES++TTLPNGLKYYDLKVGGG KAVKGSRVA
Sbjct: 83 AGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGGGLKAVKGSRVA 130
>ref|XP_004137860.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4,
chloroplastic-like [Cucumis sativus]
gi|449501004|ref|XP_004161251.1| PREDICTED:
peptidyl-prolyl cis-trans isomerase FKBP16-4,
chloroplastic-like [Cucumis sativus]
Length = 231
Score = 194 bits (493), Expect(2) = 6e-80
Identities = 93/103 (90%), Positives = 99/103 (96%)
Frame = -2
Query: 601 IHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGDSGRGAVLKGLDLGVEGMRVGGQRLLVV 422
+HYVAKW+GITFMTSRQGLGVGGGTPYGFDVG S RG VLKGLDLGV+GMRVGGQRLL+V
Sbjct: 129 VHYVAKWRGITFMTSRQGLGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIV 188
Query: 421 PPELAYGSKGVQEIPPNATIEVDVELLAIKQSPFGTGVKIVEG 293
PPELAYGSKGVQEIPPNATIE+DVELL+IKQSPFGT VKIVEG
Sbjct: 189 PPELAYGSKGVQEIPPNATIELDVELLSIKQSPFGTPVKIVEG 231
Score = 130 bits (328), Expect(2) = 6e-80
Identities = 68/102 (66%), Positives = 79/102 (77%), Gaps = 3/102 (2%)
Frame = -1
Query: 959 ISRRNLTVVPCRCS---SEVSSTNVAPPSLRFDGRRALMGCFLAAAAGIYICDVAGSVST 789
I +R ++ PCRCS S+ S+ A SL +GRRAL+G L+ A GIY C+VA +VST
Sbjct: 27 IGKRRPSLFPCRCSLSSSQEESSEQAKESLGCEGRRALIGSLLSTATGIYFCNVAEAVST 86
Query: 788 SRRALRGAKIPESEFTTLPNGLKYYDLKVGGGTKAVKGSRVA 663
SRRALR +KIPESEFTTLPNGLKYYDLKVGGGTKAV GSRVA
Sbjct: 87 SRRALRASKIPESEFTTLPNGLKYYDLKVGGGTKAVNGSRVA 128
>gb|AFK33664.1| unknown [Lotus japonicus]
Length = 229
Score = 193 bits (491), Expect(2) = 1e-79
Identities = 91/103 (88%), Positives = 99/103 (96%)
Frame = -2
Query: 601 IHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGDSGRGAVLKGLDLGVEGMRVGGQRLLVV 422
+HYVAKW+GITFMTSRQG+GVGGGTPYGFDVG+S RG VLKGLDLGV+GMRVGGQRLL+V
Sbjct: 127 VHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDLGVQGMRVGGQRLLIV 186
Query: 421 PPELAYGSKGVQEIPPNATIEVDVELLAIKQSPFGTGVKIVEG 293
PPELAYG KGVQEIPPNATIEVD+ELL+IKQSPFGT VKIVEG
Sbjct: 187 PPELAYGKKGVQEIPPNATIEVDIELLSIKQSPFGTAVKIVEG 229
Score = 130 bits (327), Expect(2) = 1e-79
Identities = 63/94 (67%), Positives = 74/94 (78%), Gaps = 3/94 (3%)
Frame = -1
Query: 935 VPCRCSSEVSSTNVAPP---SLRFDGRRALMGCFLAAAAGIYICDVAGSVSTSRRALRGA 765
+PCRCS S+ A P SL+ +GRR L+ C + AG++ CDVAG+VSTSRRALRGA
Sbjct: 33 LPCRCSCSSSNKTAAEPVTESLQIEGRRELLSCLITTVAGVFACDVAGAVSTSRRALRGA 92
Query: 764 KIPESEFTTLPNGLKYYDLKVGGGTKAVKGSRVA 663
KIPES+FTTLPNGLKYYDLKVG G +AVKGSRVA
Sbjct: 93 KIPESDFTTLPNGLKYYDLKVGNGAEAVKGSRVA 126
>ref|XP_003542563.1| PREDICTED: LOW QUALITY PROTEIN: probable FKBP-type peptidyl-prolyl
cis-trans isomerase 1, chloroplastic-like [Glycine max]
Length = 233
Score = 193 bits (491), Expect(2) = 3e-78
Identities = 92/103 (89%), Positives = 99/103 (96%)
Frame = -2
Query: 601 IHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGDSGRGAVLKGLDLGVEGMRVGGQRLLVV 422
IHYVAKWKGITFMTSRQG+GVGGGTPYGFDVG S RG VLKGLDLGV+GMRVGGQRLL+V
Sbjct: 131 IHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIV 190
Query: 421 PPELAYGSKGVQEIPPNATIEVDVELLAIKQSPFGTGVKIVEG 293
PPELAYGSKGVQEIPPN+TIE+D+ELL+IKQSPFGT VKIVEG
Sbjct: 191 PPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 233
Score = 125 bits (315), Expect(2) = 3e-78
Identities = 62/94 (65%), Positives = 71/94 (75%), Gaps = 3/94 (3%)
Frame = -1
Query: 935 VPCRCSSEVSSTNVAPP---SLRFDGRRALMGCFLAAAAGIYICDVAGSVSTSRRALRGA 765
+PC CS +S A P SL +GRRAL+ C L AG+Y CDVAG+VSTSRRALRGA
Sbjct: 37 LPCHCSHSSTSKTAAEPVTVSLSXEGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGA 96
Query: 764 KIPESEFTTLPNGLKYYDLKVGGGTKAVKGSRVA 663
KIPES++TTLPNGLKYYDLKVG G +A GSRVA
Sbjct: 97 KIPESDYTTLPNGLKYYDLKVGNGAEAKMGSRVA 130
>ref|XP_002322904.1| predicted protein [Populus trichocarpa] gi|222867534|gb|EEF04665.1|
predicted protein [Populus trichocarpa]
Length = 237
Score = 197 bits (501), Expect(2) = 4e-78
Identities = 95/103 (92%), Positives = 100/103 (97%)
Frame = -2
Query: 601 IHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGDSGRGAVLKGLDLGVEGMRVGGQRLLVV 422
+HYVAKWKGITFMTSRQGLGVGGGTPYGFDVG S RGAVLKGLDLGVEGMRVGGQRLLVV
Sbjct: 135 VHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGQSERGAVLKGLDLGVEGMRVGGQRLLVV 194
Query: 421 PPELAYGSKGVQEIPPNATIEVDVELLAIKQSPFGTGVKIVEG 293
PPELAYGSKGVQEIPPNATIE+DVELLAIKQSPFG+ VK++EG
Sbjct: 195 PPELAYGSKGVQEIPPNATIELDVELLAIKQSPFGSPVKVIEG 237
Score = 121 bits (304), Expect(2) = 4e-78
Identities = 66/110 (60%), Positives = 80/110 (72%), Gaps = 8/110 (7%)
Frame = -1
Query: 968 NIPISRRNLT-----VVPCRCS---SEVSSTNVAPPSLRFDGRRALMGCFLAAAAGIYIC 813
+IPI++R L+ + CR S S+ +T P SL +GRRAL+ L+ A GIY+C
Sbjct: 25 SIPITKRRLSNGNSGALKCRSSPSSSDDETTKPTPLSLHQEGRRALVASLLSTAVGIYVC 84
Query: 812 DVAGSVSTSRRALRGAKIPESEFTTLPNGLKYYDLKVGGGTKAVKGSRVA 663
DVA + STSRRALR +KIPES+FTTL NGLKYYDLKVGGG KAVKGSRVA
Sbjct: 85 DVAEAASTSRRALRASKIPESDFTTLSNGLKYYDLKVGGGPKAVKGSRVA 134