BLASTX nr result

ID: Coptis25_contig00012706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012706
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15946.3| unnamed protein product [Vitis vinifera]              150   3e-37
ref|XP_002279055.2| PREDICTED: uncharacterized protein LOC100263...   150   3e-37
ref|XP_002527824.1| structural constituent of ribosome, putative...   146   4e-35
ref|XP_002528843.1| structural constituent of ribosome, putative...   144   2e-34
ref|XP_004143160.1| PREDICTED: uncharacterized protein LOC101213...   133   4e-30

>emb|CBI15946.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  150 bits (379), Expect(2) = 3e-37
 Identities = 84/136 (61%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDE 228
           KLD LEKA      GS      SG  F D L D+   TLSD MDGKLKK A YF+F+ DE
Sbjct: 122 KLDRLEKAHDIYRLGSKPN-GGSGSQFLDGL-DESFNTLSDGMDGKLKKEATYFEFNPDE 179

Query: 227 VTQEDYSFRPDVRFRGGTTYDIKDLDLTKPA-TGNFVGQEFEVTTEEVLRKADFRNVKFL 51
           + QEDY+FRPDV F+ G TY+ KDLDLTKP    ++   EFEVTTEEVLRKADFRNV+FL
Sbjct: 180 IDQEDYAFRPDVAFKPGMTYEPKDLDLTKPGIRKSYKRPEFEVTTEEVLRKADFRNVRFL 239

Query: 50  SNFLTEAGIVIKRSQT 3
           ++F+TEAGI+IKRS+T
Sbjct: 240 AHFITEAGIIIKRSKT 255



 Score = 30.8 bits (68), Expect(2) = 3e-37
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -2

Query: 574 NNKTTESNSFDSAESLEKMIF---SGNNQENNPFYQ 476
           N+   + NSF+SA+  E  IF   SG+N  ++ FYQ
Sbjct: 86  NDDNQKKNSFESADDFEHRIFAGTSGSNPNSDSFYQ 121


>ref|XP_002279055.2| PREDICTED: uncharacterized protein LOC100263805 [Vitis vinifera]
          Length = 273

 Score =  150 bits (379), Expect(2) = 3e-37
 Identities = 84/136 (61%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDE 228
           KLD LEKA      GS      SG  F D L D+   TLSD MDGKLKK A YF+F+ DE
Sbjct: 73  KLDRLEKAHDIYRLGSKPN-GGSGSQFLDGL-DESFNTLSDGMDGKLKKEATYFEFNPDE 130

Query: 227 VTQEDYSFRPDVRFRGGTTYDIKDLDLTKPA-TGNFVGQEFEVTTEEVLRKADFRNVKFL 51
           + QEDY+FRPDV F+ G TY+ KDLDLTKP    ++   EFEVTTEEVLRKADFRNV+FL
Sbjct: 131 IDQEDYAFRPDVAFKPGMTYEPKDLDLTKPGIRKSYKRPEFEVTTEEVLRKADFRNVRFL 190

Query: 50  SNFLTEAGIVIKRSQT 3
           ++F+TEAGI+IKRS+T
Sbjct: 191 AHFITEAGIIIKRSKT 206



 Score = 30.8 bits (68), Expect(2) = 3e-37
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -2

Query: 574 NNKTTESNSFDSAESLEKMIF---SGNNQENNPFYQ 476
           N+   + NSF+SA+  E  IF   SG+N  ++ FYQ
Sbjct: 37  NDDNQKKNSFESADDFEHRIFAGTSGSNPNSDSFYQ 72


>ref|XP_002527824.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223532748|gb|EEF34527.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 258

 Score =  146 bits (369), Expect(2) = 4e-35
 Identities = 81/136 (59%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDE 228
           KLD +EKAR R G   N  + ++     D L ++   TLSD MDGKLKKAA+YF+FD +E
Sbjct: 63  KLDRIEKARDRPGSRMNEGISSN----LDGLYEN---TLSDGMDGKLKKAARYFEFDPEE 115

Query: 227 VTQEDYSFRPDVRFRGGTTYDIKDLDLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVKFL 51
           +T+EDY+FRPD+ FR G TYD KDLDL KP       + EF+VTTEEVL KADFRNV+FL
Sbjct: 116 ITKEDYAFRPDMTFRHGMTYDTKDLDLRKPGVRKPPKRYEFQVTTEEVLEKADFRNVRFL 175

Query: 50  SNFLTEAGIVIKRSQT 3
           SNF+TEAGI+ KRS+T
Sbjct: 176 SNFITEAGIMHKRSKT 191



 Score = 27.7 bits (60), Expect(2) = 4e-35
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 568 KTTESNSFDSAESLEKMIFSGNNQENNPFYQ 476
           K   SN+ +S +  E+ IF G ++ + PF+Q
Sbjct: 32  KKDSSNTLESNDEFEQRIFGGISENSLPFFQ 62


>ref|XP_002528843.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223531694|gb|EEF33517.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 271

 Score =  144 bits (363), Expect(2) = 2e-34
 Identities = 80/136 (58%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDE 228
           KLD +EKAR R G   N  + ++     D L ++   TLSD MDGKLKKAA+YF+FD +E
Sbjct: 76  KLDRIEKARNRPGSRMNEGISSN----LDGLYEN---TLSDGMDGKLKKAARYFEFDPEE 128

Query: 227 VTQEDYSFRPDVRFRGGTTYDIKDLDLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVKFL 51
           +T+EDY+FRPD+ FR G TYD KDLDL KP       + EF+VTTEEVL KAD RNV+FL
Sbjct: 129 ITKEDYAFRPDMTFRRGMTYDTKDLDLRKPGVRKPPKRYEFQVTTEEVLEKADSRNVRFL 188

Query: 50  SNFLTEAGIVIKRSQT 3
           SNF+TEAGI+ KRS+T
Sbjct: 189 SNFITEAGIMHKRSKT 204



 Score = 27.7 bits (60), Expect(2) = 2e-34
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 577 TNNKTTESNSFDSAESLEKMIFSGNNQENNPFYQ 476
           ++ K   SN+ +S    E+ IF G ++ + PF+Q
Sbjct: 42  SHGKKDSSNTLESNNEFEQRIFGGISENSLPFFQ 75


>ref|XP_004143160.1| PREDICTED: uncharacterized protein LOC101213524 [Cucumis sativus]
           gi|449496565|ref|XP_004160167.1| PREDICTED:
           uncharacterized LOC101213524 [Cucumis sativus]
          Length = 273

 Score =  133 bits (335), Expect(2) = 4e-30
 Identities = 77/138 (55%), Positives = 94/138 (68%), Gaps = 3/138 (2%)
 Frame = -1

Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLD--DPSTTLSDEMDGKLKKAAKYFDFDN 234
           K D L K R R G       + SGG    +L D  D   TLSD MDGKLKKA+ YF FD 
Sbjct: 76  KFDRLGKPRERIGS------KLSGGNNFHALYDREDNFDTLSDGMDGKLKKASTYFKFDP 129

Query: 233 DEVTQEDYSFRPDVRFRGGTTYDIKDLDLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVK 57
           +E+ ++DY+FR D+ F  G+TY+IKDLDLTKP       + EF+VTTEE LRKADFRNV+
Sbjct: 130 EEIEKDDYTFRADMSFSPGSTYNIKDLDLTKPGFRKPPKRVEFQVTTEEALRKADFRNVR 189

Query: 56  FLSNFLTEAGIVIKRSQT 3
           FL+NF+TEAGI+ KRS T
Sbjct: 190 FLANFITEAGIINKRSNT 207



 Score = 23.9 bits (50), Expect(2) = 4e-30
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -2

Query: 580 FTNNKTTESNSFDSAESLEKMIFSGN---NQENNPFYQ 476
           F ++   + +SF++A+  E+ IF G    +  N+ F+Q
Sbjct: 38  FDDDNKGKFDSFETADDFERRIFGGGSMVDSGNDAFFQ 75


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