BLASTX nr result
ID: Coptis25_contig00012706
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012706
(674 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15946.3| unnamed protein product [Vitis vinifera] 150 3e-37
ref|XP_002279055.2| PREDICTED: uncharacterized protein LOC100263... 150 3e-37
ref|XP_002527824.1| structural constituent of ribosome, putative... 146 4e-35
ref|XP_002528843.1| structural constituent of ribosome, putative... 144 2e-34
ref|XP_004143160.1| PREDICTED: uncharacterized protein LOC101213... 133 4e-30
>emb|CBI15946.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 150 bits (379), Expect(2) = 3e-37
Identities = 84/136 (61%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Frame = -1
Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDE 228
KLD LEKA GS SG F D L D+ TLSD MDGKLKK A YF+F+ DE
Sbjct: 122 KLDRLEKAHDIYRLGSKPN-GGSGSQFLDGL-DESFNTLSDGMDGKLKKEATYFEFNPDE 179
Query: 227 VTQEDYSFRPDVRFRGGTTYDIKDLDLTKPA-TGNFVGQEFEVTTEEVLRKADFRNVKFL 51
+ QEDY+FRPDV F+ G TY+ KDLDLTKP ++ EFEVTTEEVLRKADFRNV+FL
Sbjct: 180 IDQEDYAFRPDVAFKPGMTYEPKDLDLTKPGIRKSYKRPEFEVTTEEVLRKADFRNVRFL 239
Query: 50 SNFLTEAGIVIKRSQT 3
++F+TEAGI+IKRS+T
Sbjct: 240 AHFITEAGIIIKRSKT 255
Score = 30.8 bits (68), Expect(2) = 3e-37
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = -2
Query: 574 NNKTTESNSFDSAESLEKMIF---SGNNQENNPFYQ 476
N+ + NSF+SA+ E IF SG+N ++ FYQ
Sbjct: 86 NDDNQKKNSFESADDFEHRIFAGTSGSNPNSDSFYQ 121
>ref|XP_002279055.2| PREDICTED: uncharacterized protein LOC100263805 [Vitis vinifera]
Length = 273
Score = 150 bits (379), Expect(2) = 3e-37
Identities = 84/136 (61%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Frame = -1
Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDE 228
KLD LEKA GS SG F D L D+ TLSD MDGKLKK A YF+F+ DE
Sbjct: 73 KLDRLEKAHDIYRLGSKPN-GGSGSQFLDGL-DESFNTLSDGMDGKLKKEATYFEFNPDE 130
Query: 227 VTQEDYSFRPDVRFRGGTTYDIKDLDLTKPA-TGNFVGQEFEVTTEEVLRKADFRNVKFL 51
+ QEDY+FRPDV F+ G TY+ KDLDLTKP ++ EFEVTTEEVLRKADFRNV+FL
Sbjct: 131 IDQEDYAFRPDVAFKPGMTYEPKDLDLTKPGIRKSYKRPEFEVTTEEVLRKADFRNVRFL 190
Query: 50 SNFLTEAGIVIKRSQT 3
++F+TEAGI+IKRS+T
Sbjct: 191 AHFITEAGIIIKRSKT 206
Score = 30.8 bits (68), Expect(2) = 3e-37
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = -2
Query: 574 NNKTTESNSFDSAESLEKMIF---SGNNQENNPFYQ 476
N+ + NSF+SA+ E IF SG+N ++ FYQ
Sbjct: 37 NDDNQKKNSFESADDFEHRIFAGTSGSNPNSDSFYQ 72
>ref|XP_002527824.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223532748|gb|EEF34527.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 258
Score = 146 bits (369), Expect(2) = 4e-35
Identities = 81/136 (59%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Frame = -1
Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDE 228
KLD +EKAR R G N + ++ D L ++ TLSD MDGKLKKAA+YF+FD +E
Sbjct: 63 KLDRIEKARDRPGSRMNEGISSN----LDGLYEN---TLSDGMDGKLKKAARYFEFDPEE 115
Query: 227 VTQEDYSFRPDVRFRGGTTYDIKDLDLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVKFL 51
+T+EDY+FRPD+ FR G TYD KDLDL KP + EF+VTTEEVL KADFRNV+FL
Sbjct: 116 ITKEDYAFRPDMTFRHGMTYDTKDLDLRKPGVRKPPKRYEFQVTTEEVLEKADFRNVRFL 175
Query: 50 SNFLTEAGIVIKRSQT 3
SNF+TEAGI+ KRS+T
Sbjct: 176 SNFITEAGIMHKRSKT 191
Score = 27.7 bits (60), Expect(2) = 4e-35
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 568 KTTESNSFDSAESLEKMIFSGNNQENNPFYQ 476
K SN+ +S + E+ IF G ++ + PF+Q
Sbjct: 32 KKDSSNTLESNDEFEQRIFGGISENSLPFFQ 62
>ref|XP_002528843.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223531694|gb|EEF33517.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 271
Score = 144 bits (363), Expect(2) = 2e-34
Identities = 80/136 (58%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Frame = -1
Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDE 228
KLD +EKAR R G N + ++ D L ++ TLSD MDGKLKKAA+YF+FD +E
Sbjct: 76 KLDRIEKARNRPGSRMNEGISSN----LDGLYEN---TLSDGMDGKLKKAARYFEFDPEE 128
Query: 227 VTQEDYSFRPDVRFRGGTTYDIKDLDLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVKFL 51
+T+EDY+FRPD+ FR G TYD KDLDL KP + EF+VTTEEVL KAD RNV+FL
Sbjct: 129 ITKEDYAFRPDMTFRRGMTYDTKDLDLRKPGVRKPPKRYEFQVTTEEVLEKADSRNVRFL 188
Query: 50 SNFLTEAGIVIKRSQT 3
SNF+TEAGI+ KRS+T
Sbjct: 189 SNFITEAGIMHKRSKT 204
Score = 27.7 bits (60), Expect(2) = 2e-34
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 577 TNNKTTESNSFDSAESLEKMIFSGNNQENNPFYQ 476
++ K SN+ +S E+ IF G ++ + PF+Q
Sbjct: 42 SHGKKDSSNTLESNNEFEQRIFGGISENSLPFFQ 75
>ref|XP_004143160.1| PREDICTED: uncharacterized protein LOC101213524 [Cucumis sativus]
gi|449496565|ref|XP_004160167.1| PREDICTED:
uncharacterized LOC101213524 [Cucumis sativus]
Length = 273
Score = 133 bits (335), Expect(2) = 4e-30
Identities = 77/138 (55%), Positives = 94/138 (68%), Gaps = 3/138 (2%)
Frame = -1
Query: 407 KLDDLEKARRRTGFGSNWTVRNSGGAFSDSLLD--DPSTTLSDEMDGKLKKAAKYFDFDN 234
K D L K R R G + SGG +L D D TLSD MDGKLKKA+ YF FD
Sbjct: 76 KFDRLGKPRERIGS------KLSGGNNFHALYDREDNFDTLSDGMDGKLKKASTYFKFDP 129
Query: 233 DEVTQEDYSFRPDVRFRGGTTYDIKDLDLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVK 57
+E+ ++DY+FR D+ F G+TY+IKDLDLTKP + EF+VTTEE LRKADFRNV+
Sbjct: 130 EEIEKDDYTFRADMSFSPGSTYNIKDLDLTKPGFRKPPKRVEFQVTTEEALRKADFRNVR 189
Query: 56 FLSNFLTEAGIVIKRSQT 3
FL+NF+TEAGI+ KRS T
Sbjct: 190 FLANFITEAGIINKRSNT 207
Score = 23.9 bits (50), Expect(2) = 4e-30
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -2
Query: 580 FTNNKTTESNSFDSAESLEKMIFSGN---NQENNPFYQ 476
F ++ + +SF++A+ E+ IF G + N+ F+Q
Sbjct: 38 FDDDNKGKFDSFETADDFERRIFGGGSMVDSGNDAFFQ 75