BLASTX nr result
ID: Coptis25_contig00012682
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012682
(1191 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511544.1| abc transporter, putative [Ricinus communis]... 111 6e-35
ref|XP_003525471.1| PREDICTED: ABC transporter A family member 7... 110 1e-34
ref|XP_002511543.1| abc transporter, putative [Ricinus communis]... 112 2e-34
ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7... 113 6e-34
emb|CBI15253.3| unnamed protein product [Vitis vinifera] 113 6e-34
>ref|XP_002511544.1| abc transporter, putative [Ricinus communis]
gi|223550659|gb|EEF52146.1| abc transporter, putative
[Ricinus communis]
Length = 984
Score = 111 bits (277), Expect(2) = 6e-35
Identities = 51/67 (76%), Positives = 59/67 (88%)
Frame = +2
Query: 989 STKGFSLALPQGECFGMLGPNGAGKSTSISMMIGLTLPTSGTAFIQGLDIRTEMNRIYTS 1168
+ +G SLALP GECFGMLGPNGAGK++ ISMMIGLT PTSG A++QGLDI+T M+ IYTS
Sbjct: 682 AVRGLSLALPPGECFGMLGPNGAGKTSFISMMIGLTKPTSGAAYVQGLDIQTRMDWIYTS 741
Query: 1169 MGVCPQH 1189
MGVCPQH
Sbjct: 742 MGVCPQH 748
Score = 63.9 bits (154), Expect(2) = 6e-35
Identities = 25/35 (71%), Positives = 34/35 (97%)
Frame = +1
Query: 886 RKKVEQLLLSPSTSYAVICDNLEKIYPGKDGNPEK 990
R+KVEQLLL P+T++A++CDNL+K+YPG+DGNPEK
Sbjct: 646 REKVEQLLLEPNTTHAIVCDNLKKVYPGRDGNPEK 680
Score = 100 bits (249), Expect(3) = 2e-24
Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = +1
Query: 619 FLNSDKNNFNVNIWINSTYRKKE---EITRLHAPRLVNVVSNAYLDFLRGAGVMTLFDFV 789
FLNS++NNFNV+IW NSTYR E + + PR VN+VSNA+L F +G G L +FV
Sbjct: 309 FLNSNRNNFNVSIWYNSTYRDGEIQGQFNFVRVPRAVNLVSNAFLQFFQGPGTKMLLEFV 368
Query: 790 KEMPQDPPKELVDPASFVGALFYTWFILNLFP 885
KEMP+ K VD AS +G LF++W IL LFP
Sbjct: 369 KEMPKAASKINVDLASLLGTLFFSWVILQLFP 400
Score = 30.0 bits (66), Expect(3) = 2e-24
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 483 EARCLPDLLLWRKSSSVINLEVFRG 557
E C+ L LWR SSS +N E+++G
Sbjct: 266 EVACVQGLNLWRNSSSEVNEELYKG 290
Score = 29.3 bits (64), Expect(3) = 2e-24
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 560 RGYIDRNAEKKVNEIVTAYDF 622
+GY N E K+NEI++AYDF
Sbjct: 289 KGYRRGNLEGKINEILSAYDF 309
>ref|XP_003525471.1| PREDICTED: ABC transporter A family member 7-like [Glycine max]
Length = 949
Score = 110 bits (274), Expect(2) = 1e-34
Identities = 49/67 (73%), Positives = 60/67 (89%)
Frame = +2
Query: 989 STKGFSLALPQGECFGMLGPNGAGKSTSISMMIGLTLPTSGTAFIQGLDIRTEMNRIYTS 1168
+ +G L++PQGECFGMLGPNGAGK++ I+MMIGLT PTSG AF+QGLDIRT+M+ IYT+
Sbjct: 647 AVRGLFLSVPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGMAFVQGLDIRTQMDGIYTT 706
Query: 1169 MGVCPQH 1189
MGVCPQH
Sbjct: 707 MGVCPQH 713
Score = 63.9 bits (154), Expect(2) = 1e-34
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Frame = +1
Query: 667 STYRKKEEITRLHAPRLVNVVSNAYLDFLRGAGVMT--LFDFVKEMPQDPPKELVDPASF 840
ST KE + + ++ + + Y+D + +G LF F+K + PP + +D
Sbjct: 536 STNGMKEVLIIMFVEWIMMLFAAFYVDQVLSSGSRKGPLF-FLKGFQKRPPFQKLDAQMP 594
Query: 841 VGALFYTWFILNLFPRK-KVEQLLLSPSTSYAVICDNLEKIYPGKDGNPEKY 993
V +F ++ K KVEQLLL P+ ++A++CD+L+K+YPG+DGNP+KY
Sbjct: 595 VSKVFSQMEKPDVIQEKEKVEQLLLEPTINHAIVCDDLKKVYPGRDGNPDKY 646
Score = 91.7 bits (226), Expect(3) = 4e-21
Identities = 43/92 (46%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Frame = +1
Query: 619 FLNSDKNNFNVNIWINSTYRKKEEITR---LHAPRLVNVVSNAYLDFLRGAGVMTLFDFV 789
FLNS++N +NV+IW NSTY++ + L PR +N++SN+YL FL G G LF+FV
Sbjct: 276 FLNSNRNRYNVSIWYNSTYKQGTGFSSNVLLRIPRSINLLSNSYLQFLLGPGTKMLFEFV 335
Query: 790 KEMPQDPPKELVDPASFVGALFYTWFILNLFP 885
KEMP+ ++ +S +G +F+TW IL LFP
Sbjct: 336 KEMPKPETSFRLEISSLLGTMFFTWVILQLFP 367
Score = 29.6 bits (65), Expect(3) = 4e-21
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 483 EARCLPDLLLWRKSSSVINLEVFRG 557
E +C L LWR SSS IN E+++G
Sbjct: 233 EIKCAQALNLWRNSSSEINGELYKG 257
Score = 27.3 bits (59), Expect(3) = 4e-21
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 560 RGYIDRNAEKKVNEIVTAYDF 622
+GY N + +VNEIV+A+DF
Sbjct: 256 KGYQTGNTDGQVNEIVSAFDF 276
>ref|XP_002511543.1| abc transporter, putative [Ricinus communis]
gi|223550658|gb|EEF52145.1| abc transporter, putative
[Ricinus communis]
Length = 902
Score = 112 bits (281), Expect(2) = 2e-34
Identities = 51/67 (76%), Positives = 61/67 (91%)
Frame = +2
Query: 989 STKGFSLALPQGECFGMLGPNGAGKSTSISMMIGLTLPTSGTAFIQGLDIRTEMNRIYTS 1168
+ +G +LALP GECFGMLGPNGAGK++ ISMM+GLT TSGTA+IQGLDIRT+M+RIYTS
Sbjct: 607 AVRGLTLALPPGECFGMLGPNGAGKTSFISMMVGLTKQTSGTAYIQGLDIRTQMDRIYTS 666
Query: 1169 MGVCPQH 1189
+GVCPQH
Sbjct: 667 IGVCPQH 673
Score = 60.8 bits (146), Expect(2) = 2e-34
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = +1
Query: 886 RKKVEQLLLSPSTSYAVICDNLEKIYPGKDGNPEK 990
R+KVEQLLL PS S+ +ICDNL+K+YPG+DGNP+K
Sbjct: 571 REKVEQLLLEPSISHLIICDNLKKLYPGRDGNPDK 605
Score = 85.5 bits (210), Expect(2) = 5e-18
Identities = 43/88 (48%), Positives = 55/88 (62%)
Frame = +1
Query: 619 FLNSDKNNFNVNIWINSTYRKKEEITRLHAPRLVNVVSNAYLDFLRGAGVMTLFDFVKEM 798
F NS+ N FNV+IW + +Y R VN+VSNAYL FL G+G LF+FVKEM
Sbjct: 244 FFNSNGNIFNVSIWYDPSYE-------FRVARSVNLVSNAYLQFLHGSGTKMLFEFVKEM 296
Query: 799 PQDPPKELVDPASFVGALFYTWFILNLF 882
P+ K +D +S +G LF+TW IL LF
Sbjct: 297 PRVATKSYLDVSSLLGVLFFTWIILRLF 324
Score = 32.7 bits (73), Expect(2) = 5e-18
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 483 EARCLPDLLLWRKSSSVINLEVFRG 557
EA+C+ L LWR SSS IN E ++G
Sbjct: 211 EAKCVQGLNLWRNSSSQINEETYKG 235
>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
Length = 949
Score = 113 bits (282), Expect(2) = 6e-34
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +2
Query: 989 STKGFSLALPQGECFGMLGPNGAGKSTSISMMIGLTLPTSGTAFIQGLDIRTEMNRIYTS 1168
+ KG SLAL GECFGMLGPNGAGK++ ISMMIGLT+PTSGTAF++GLDIR +M+ IYTS
Sbjct: 647 AVKGLSLALSHGECFGMLGPNGAGKTSFISMMIGLTVPTSGTAFVEGLDIRIDMDGIYTS 706
Query: 1169 MGVCPQH 1189
MGVCPQH
Sbjct: 707 MGVCPQH 713
Score = 58.5 bits (140), Expect(2) = 6e-34
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1
Query: 886 RKKVEQLLLSPSTSYAVICDNLEKIYPGKDGNPEK 990
R+KVEQLLL ++A+ICDNL K+YPG+DGNPEK
Sbjct: 611 REKVEQLLLESGANHAIICDNLRKVYPGRDGNPEK 645
Score = 95.1 bits (235), Expect(3) = 1e-24
Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Frame = +1
Query: 619 FLNSDKNNFNVNIWINSTYRKK---EEITRLHAPRLVNVVSNAYLDFLRGAGVMTLFDFV 789
FLNS+ NNFNV+IW NSTY+ I + PR VN+ SNAYL ++G GV + DF+
Sbjct: 271 FLNSNGNNFNVSIWYNSTYKNDAGASSIALVRVPRSVNLASNAYLQLVQGDGVKMVLDFI 330
Query: 790 KEMPQDPPKELVDPASFVGALFYTWFILNLFP 885
KEMP+ + +D +S +G LF+TW IL LFP
Sbjct: 331 KEMPKPETQVRLDLSSVLGTLFFTWVILQLFP 362
Score = 32.7 bits (73), Expect(3) = 1e-24
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 468 TFLELEARCLPDLLLWRKSSSVINLEVFRG 557
T ++ E +C+ L LWR SSS IN E+F+G
Sbjct: 223 TNVQQEIQCVQGLHLWRNSSSEINDELFKG 252
Score = 32.7 bits (73), Expect(3) = 1e-24
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 560 RGYIDRNAEKKVNEIVTAYDF 622
+GY N+E+K+NEIV AYDF
Sbjct: 251 KGYHKGNSERKINEIVAAYDF 271
>emb|CBI15253.3| unnamed protein product [Vitis vinifera]
Length = 928
Score = 113 bits (282), Expect(2) = 6e-34
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +2
Query: 989 STKGFSLALPQGECFGMLGPNGAGKSTSISMMIGLTLPTSGTAFIQGLDIRTEMNRIYTS 1168
+ KG SLAL GECFGMLGPNGAGK++ ISMMIGLT+PTSGTAF++GLDIR +M+ IYTS
Sbjct: 626 AVKGLSLALSHGECFGMLGPNGAGKTSFISMMIGLTVPTSGTAFVEGLDIRIDMDGIYTS 685
Query: 1169 MGVCPQH 1189
MGVCPQH
Sbjct: 686 MGVCPQH 692
Score = 58.5 bits (140), Expect(2) = 6e-34
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1
Query: 886 RKKVEQLLLSPSTSYAVICDNLEKIYPGKDGNPEK 990
R+KVEQLLL ++A+ICDNL K+YPG+DGNPEK
Sbjct: 590 REKVEQLLLESGANHAIICDNLRKVYPGRDGNPEK 624
Score = 95.1 bits (235), Expect(3) = 1e-24
Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Frame = +1
Query: 619 FLNSDKNNFNVNIWINSTYRKK---EEITRLHAPRLVNVVSNAYLDFLRGAGVMTLFDFV 789
FLNS+ NNFNV+IW NSTY+ I + PR VN+ SNAYL ++G GV + DF+
Sbjct: 250 FLNSNGNNFNVSIWYNSTYKNDAGASSIALVRVPRSVNLASNAYLQLVQGDGVKMVLDFI 309
Query: 790 KEMPQDPPKELVDPASFVGALFYTWFILNLFP 885
KEMP+ + +D +S +G LF+TW IL LFP
Sbjct: 310 KEMPKPETQVRLDLSSVLGTLFFTWVILQLFP 341
Score = 32.7 bits (73), Expect(3) = 1e-24
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 468 TFLELEARCLPDLLLWRKSSSVINLEVFRG 557
T ++ E +C+ L LWR SSS IN E+F+G
Sbjct: 202 TNVQQEIQCVQGLHLWRNSSSEINDELFKG 231
Score = 32.7 bits (73), Expect(3) = 1e-24
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 560 RGYIDRNAEKKVNEIVTAYDF 622
+GY N+E+K+NEIV AYDF
Sbjct: 230 KGYHKGNSERKINEIVAAYDF 250