BLASTX nr result

ID: Coptis25_contig00012672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012672
         (1441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282899.1| PREDICTED: NAC domain-containing protein 68 ...    95   5e-17
ref|XP_002327163.1| NAC domain protein, IPR003441 [Populus trich...    89   2e-15
emb|CAN83344.1| hypothetical protein VITISV_042275 [Vitis vinifera]    72   3e-10
ref|XP_002510187.1| transcription factor, putative [Ricinus comm...    70   1e-09
ref|XP_004169662.1| PREDICTED: uncharacterized LOC101204608 [Cuc...    61   6e-07

>ref|XP_002282899.1| PREDICTED: NAC domain-containing protein 68 [Vitis vinifera]
          Length = 302

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 90/306 (29%), Positives = 127/306 (41%), Gaps = 28/306 (9%)
 Frame = +2

Query: 59  MGEEEDPKNKP--LPPGFRFNPTEQQLFSFYLAXXXXXXXXXXXXXXX---DVIPEIDSI 223
           MG++ + +  P  LPPG RF+P+E+QL  +YL                   + I E+D +
Sbjct: 1   MGDQNNSQTTPFQLPPGCRFHPSEEQLIRYYLTGKNTTGALSSSDHNVFGFNAIGELD-L 59

Query: 224 YNYDPYDLPEIDSFPXXXXXXXXXXXXFTLXXXXXXXXXXXXX-FWKRKCRXXXXXXXXX 400
           Y Y+P++LP+   F             +T               FWKR  R         
Sbjct: 60  YGYEPFNLPDTACFGFGHGGRRRHWYCYTARVLKEKGRRKAGGGFWKRTGRVRDVVVGKD 119

Query: 401 XXXXXX---FVFYKRDYEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMK 571
                    F FY  +  K     RTDW+M EYALVDH    FVLCRV++KS S N    
Sbjct: 120 KVTLGRRTTFAFYLGNSSKS--AVRTDWVMFEYALVDHLKASFVLCRVFVKSPSGNNASD 177

Query: 572 VGLNSHTEDSFAAKNN---NVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSLGVVRSDQ 742
             ++S  E+S +A  +     DG + S I E  V  DN V  +         L     DQ
Sbjct: 178 HVISSCGEESVSAVRHVGIQHDGTATSDIVEANVHGDNSVDTKNEIPKISARLLSELDDQ 237

Query: 743 LIGNSNRLIVSGYTF-------DDVDMDELKTNTI---------FLEGDYLELDDLVGPL 874
           ++  ++R  V+ + F       + V      T  +          LE D++ELDDLV PL
Sbjct: 238 VM--THRGFVADFNFPLGIQAHNPVMSTSGSTRFVDGTTQGLMSILEEDFIELDDLVYPL 295

Query: 875 LAFGSS 892
           L    S
Sbjct: 296 LGIDQS 301


>ref|XP_002327163.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222835478|gb|EEE73913.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 288

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 84/281 (29%), Positives = 120/281 (42%), Gaps = 23/281 (8%)
 Frame = +2

Query: 92  LPPGFRFNPTEQQLFSFYLAXXXXXXXXXXXXXXX-DVIPEIDSIYNYDPYDLPEIDSFP 268
           LPPG RF P+++QLF +YL                 D+I E+D +Y+Y+P+DLPE   + 
Sbjct: 15  LPPGCRFYPSDEQLFCYYLKNKNRTVPNDTDDVNGYDLIKELD-LYDYEPFDLPENACYA 73

Query: 269 XXXXXXXXXXXXFTLXXXXXXXXXXXXXFWKRKCRXXXXXXXXXXXXXXX----FVFYKR 436
                       +T              FW+   R                   FVFY  
Sbjct: 74  YGYKARKRHWYCYTKEQVGVPRRKAKGGFWRISGRVRDVVVGLGGEAVMGTRTRFVFYMG 133

Query: 437 DYEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNSHTEDSFAAKN 616
           +  K     RT W++ EYALVDH    FVLCRV++KS   N + +  ++S  E+S +A  
Sbjct: 134 NSVKS--AVRTGWVLYEYALVDHAKASFVLCRVFVKSRGGNSISENVVSSCAEESVSALP 191

Query: 617 N---------NVDGASASGIGEV------VVRQ-DNQVAVRPFSDNGVGSLGVVRSDQLI 748
           +           D A A G  ++      + R+ D+QV  RP S   + S       Q  
Sbjct: 192 SIGAQHDEFLTPDIAEAKGPNDLSRYSARLDRELDDQVTTRPLS---ISSFQFPSDSQC- 247

Query: 749 GNSNRLIVSGYTFDD--VDMDELKTNTIFLEGDYLELDDLV 865
            N      SG T  +  VD +  +     LEGD++ELDDLV
Sbjct: 248 -NEAVRRTSGPTGGNMYVDAETSQQLQSILEGDFIELDDLV 287


>emb|CAN83344.1| hypothetical protein VITISV_042275 [Vitis vinifera]
          Length = 382

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 82/297 (27%), Positives = 116/297 (39%), Gaps = 18/297 (6%)
 Frame = +2

Query: 56  LMGEEEDPKNKP--LPPGFRFNPTEQQLFSFYLA---XXXXXXXXXXXXXXXDVIPEIDS 220
           LMG++ + +  P  LPPG RF+P+E+QL  +YL                   + I E+D 
Sbjct: 100 LMGDQNNSQTTPFQLPPGCRFHPSEEQLIRYYLTGKNTTGALSSSDHNVFGFNAIGELD- 158

Query: 221 IYNYDPYDLPEIDSFPXXXXXXXXXXXXFTL-XXXXXXXXXXXXXFWKRKCR---XXXXX 388
           +Y Y+P++LP+   F             +T               FWKR  R        
Sbjct: 159 LYGYEPFNLPDTACFGFGHGGRRRHWYCYTARVLKEKGRRKAGGGFWKRTGRVRDVVVGK 218

Query: 389 XXXXXXXXXXFVFYKRDYEKERRCFRTDWMMIEYALVDHQMDFFVLCRV-------YLKS 547
                     F FY  +  K     RTDW+M EYALVDH    F    V        L++
Sbjct: 219 DKVTLGRRTTFAFYLGNSSKS--AVRTDWVMFEYALVDHLKLLFCTSPVANFGMHYSLQT 276

Query: 548 CSDNKVMK--VGLNSHTEDSFAAKNNNVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSL 721
             D       V  N H ++S   K N +   SA  + E+    D  +  R F  +    L
Sbjct: 277 LHDGTATSDIVEANVHGDNSVDTK-NXIPKISARLLSEL---DDQVMTHRGFVADFNFPL 332

Query: 722 GVVRSDQLIGNSNRLIVSGYTFDDVDMDELKTNTIFLEGDYLELDDLVGPLLAFGSS 892
           G+   + ++  S         F D     L +    LE D++ELDDLV PLL    S
Sbjct: 333 GIQAHNPVMSTS-----GSTRFVDGTTQGLMS---ILEEDFIELDDLVYPLLGIDQS 381


>ref|XP_002510187.1| transcription factor, putative [Ricinus communis]
           gi|223550888|gb|EEF52374.1| transcription factor,
           putative [Ricinus communis]
          Length = 276

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 72/275 (26%), Positives = 111/275 (40%), Gaps = 19/275 (6%)
 Frame = +2

Query: 98  PGFRFNPTEQQLFSFYLAXXXXXXXXXXXXXXX---DVIPEIDSIYNYDPYDLPEIDSFP 268
           PG RF P+++QL  +YL                   D+I E+D +Y Y+P +LPE   + 
Sbjct: 6   PGCRFYPSDEQLLCYYLTSKTDEVGDGNNDKKINGYDLIKELD-LYEYEPSNLPENACYS 64

Query: 269 XXXXXXXXXXXXFTLXXXXXXXXXXXXX-------FWKRKCRXXXXXXXXXXXXXXX--- 418
                       +T                     +W+   R                  
Sbjct: 65  YGYKGRRRHWYCYTKKFRVWKGEGRRRRRRKAKGGYWRSSGRVRDVVDPGGKVVIGTRSK 124

Query: 419 FVFYKRDYEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNSHTED 598
           FVFY  +    +   RTDW++ EYAL+ H    +VLCRV++KS + N   +  L+   E 
Sbjct: 125 FVFYSGN--SVQSLIRTDWVLYEYALMHHVKASYVLCRVFVKSRAGNSNSENVLSCCAEQ 182

Query: 599 SFAAKNN---NVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSLGVVRSDQLIGNSNRLI 769
           + +A  +     DG     I E  V + N V     +D     LG+        +SN+L+
Sbjct: 183 NVSAVRHIGIQHDGFLTPDIVEAKVHRGNSVDAE--NDLSKYPLGLSTKLDAFPDSNKLV 240

Query: 770 -VSGYTFDDVDMDELKTNTI--FLEGDYLELDDLV 865
                  DD+ +D   T  +   LEGD++ELDDL+
Sbjct: 241 RTPELPGDDMLVDAGTTQELVSILEGDFIELDDLL 275


>ref|XP_004169662.1| PREDICTED: uncharacterized LOC101204608 [Cucumis sativus]
          Length = 301

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 72/296 (24%), Positives = 117/296 (39%), Gaps = 39/296 (13%)
 Frame = +2

Query: 92  LPPGFRFNPTEQQLFSFYLAXXXXXXXXXXXXXXXDVIPEIDSIYNYDPYDLPEIDSFPX 271
           LPPG RF P+++QL  FYL+               ++I +++  ++YDP+DLP+   F  
Sbjct: 25  LPPGCRFFPSDEQLLRFYLS------NKASGHNDSNLIKDLNP-FDYDPFDLPDSACFSY 77

Query: 272 XXXXXXXXXXXF--TLXXXXXXXXXXXXXFWKR--KCRXXXXXXXXXXXXXXXFVFYKRD 439
                      +  T              +W+R  K +               FVFY  +
Sbjct: 78  GSKARKKHWYYYALTAFRENGGWIRMKTGYWRRKGKVKEVTGRRGLVLGIKRTFVFYLGN 137

Query: 440 YEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNSHTEDSFAAKNN 619
                +  +T+W+M EYAL       FVL RV++ S   N++   GL+S+ + S +A  +
Sbjct: 138 --SINKSLKTNWIMYEYALDHRFKASFVLHRVFV-SGRGNRISGNGLSSYGDGSVSAVFH 194

Query: 620 NVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSLGVVRSDQL--IGNSNRLIVSGYTFDD 793
           N  G    GI     + +N V   P   + + +  V+ + ++    NSN L+++    D 
Sbjct: 195 N--GNQQDGI-----QVNNLVDAEPCEGDAMNTTNVISTHEMGRAENSNCLLIT----DP 243

Query: 794 VDMDELKTNTI---------------------------------FLEGDYLELDDL 862
           V      T  +                                  LEGD+LELDDL
Sbjct: 244 VSAPAATTLQVPSKAFPCEMMTSSPVTPPGTMPTHVIDKEQLISILEGDFLELDDL 299


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