BLASTX nr result

ID: Coptis25_contig00012661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012661
         (1557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308897.1| predicted protein [Populus trichocarpa] gi|2...   361   3e-97
ref|XP_002323256.1| predicted protein [Populus trichocarpa] gi|2...   349   1e-93
ref|NP_566370.1| uncharacterized protein [Arabidopsis thaliana] ...   347   6e-93
gb|AAF02817.1|AC009400_13 unknown protein [Arabidopsis thaliana]      343   9e-92
ref|XP_002884785.1| hypothetical protein ARALYDRAFT_478351 [Arab...   341   3e-91

>ref|XP_002308897.1| predicted protein [Populus trichocarpa] gi|222854873|gb|EEE92420.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  361 bits (927), Expect = 3e-97
 Identities = 193/325 (59%), Positives = 234/325 (72%), Gaps = 3/325 (0%)
 Frame = -1

Query: 1410 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1231
            MSSG  R+VS  DIQ+VQNLIERCLQLYMN+ EV++TLLAQAKIEPGFTELVWQKLEEEN
Sbjct: 1    MSSGPVRRVSPKDIQVVQNLIERCLQLYMNQNEVVETLLAQAKIEPGFTELVWQKLEEEN 60

Query: 1230 REFFKAYHVRLMVKHQITVFNRLLDRQMELMRTMYPAGVAPLSIPNGSH-SSMHQGQAPF 1054
            REFF+AY++RL VK QI  FN+LL +Q  LMR +   GV  +   NGSH  SMHQ  A  
Sbjct: 61   REFFRAYYLRLKVKQQIEEFNKLLVQQAHLMRDLNSTGVVSMPTSNGSHIPSMHQNTA-C 119

Query: 1053 FVAEHAVPLPRTESIHHPIGPPTT--FSNGRPSIHGNMQSVDDTALHVGRMDVSSNMHSA 880
            +  +H  P  + ES+HHPIG   T  ++NG  S+H +M +  + A    R+D   NM S 
Sbjct: 120  YGPDHTGPALKPESMHHPIGSSLTNAYTNGGSSLHSSMHAAVEIAARSSRIDAPPNMLSM 179

Query: 879  QNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPTIGDTAVPSFGSVEPGPQP 700
            Q+S++ ++ GMNG +IKSE GY   S + FGADGNVL   P+I D +V SF SVE   Q 
Sbjct: 180  QSSNIGLLQGMNGGMIKSEAGYSGTSPYMFGADGNVLEARPSIADASVASFSSVESSSQA 239

Query: 699  LNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESYSRSPFLGTDVGDFFNSPG 520
            LN S+LD DTS FGFL QIPRNFSLSD+ ADF+QSSEILE+Y RSP+L  D  +F +S  
Sbjct: 240  LNESILDADTSSFGFLSQIPRNFSLSDLTADFTQSSEILENYPRSPYLAADNDNFPDSQE 299

Query: 519  RDCQGDNRRLDTISEGLSYDDFCSE 445
            R+  GDNRRLDTISEG+SYDDF SE
Sbjct: 300  REHPGDNRRLDTISEGMSYDDFGSE 324


>ref|XP_002323256.1| predicted protein [Populus trichocarpa] gi|222867886|gb|EEF05017.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  349 bits (895), Expect = 1e-93
 Identities = 187/325 (57%), Positives = 232/325 (71%), Gaps = 3/325 (0%)
 Frame = -1

Query: 1410 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1231
            MSSG  R+V   DIQ+VQNLIERCLQLYMN+ EV++TLLAQAKIEPGFTELVWQKLEEEN
Sbjct: 1    MSSGPVRRVLPKDIQVVQNLIERCLQLYMNQTEVVETLLAQAKIEPGFTELVWQKLEEEN 60

Query: 1230 REFFKAYHVRLMVKHQITVFNRLLDRQMELMRTMYPAGVAPLSIPNGSH-SSMHQGQAPF 1054
             EFF+AY++RL VK QI  FN+LL +Q  LM  +   GVAP+   NG H S +HQ  A  
Sbjct: 61   GEFFRAYYLRLKVKQQIEEFNKLLVQQAHLMHDLNSTGVAPMPPSNGFHISPLHQNTA-C 119

Query: 1053 FVAEHAVPLPRTESIHHPIGPPTT--FSNGRPSIHGNMQSVDDTALHVGRMDVSSNMHSA 880
            +  +H  P  + ES+HHPIG   T  ++NG  S+H +M +  + +    R+D   NM S 
Sbjct: 120  YGPDHTGPTLKPESMHHPIGSSLTNAYTNGGSSLHSSMHAAVEISARANRIDAPPNMLSM 179

Query: 879  QNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPTIGDTAVPSFGSVEPGPQP 700
            Q+S++ ++ GMNG +IKSE GY   S + FGADGNVL   P+I D +V SF SV+   Q 
Sbjct: 180  QSSNIGLLQGMNGGMIKSEAGYSGTSPYMFGADGNVLEARPSIADASVASFSSVDSSSQA 239

Query: 699  LNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESYSRSPFLGTDVGDFFNSPG 520
            LN S+LD DTS FGFL QIP+ FSLSD+ ADF+QSSEILE+YSRSPFL  D  +F +S  
Sbjct: 240  LNESILDADTSSFGFLSQIPQVFSLSDLTADFTQSSEILENYSRSPFLAADNDNFPDSRE 299

Query: 519  RDCQGDNRRLDTISEGLSYDDFCSE 445
            R+  GDNRRLD+ISEG+SYDDF SE
Sbjct: 300  REHPGDNRRLDSISEGMSYDDFGSE 324


>ref|NP_566370.1| uncharacterized protein [Arabidopsis thaliana]
            gi|42572351|ref|NP_974271.1| uncharacterized protein
            [Arabidopsis thaliana] gi|15809982|gb|AAL06918.1|
            AT3g10250/F14P13_15 [Arabidopsis thaliana]
            gi|18958054|gb|AAL79600.1| AT3g10250/F14P13_15
            [Arabidopsis thaliana] gi|21536630|gb|AAM60962.1| unknown
            [Arabidopsis thaliana] gi|222423631|dbj|BAH19784.1|
            AT3G10250 [Arabidopsis thaliana]
            gi|332641356|gb|AEE74877.1| uncharacterized protein
            [Arabidopsis thaliana] gi|332641357|gb|AEE74878.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 324

 Score =  347 bits (889), Expect = 6e-93
 Identities = 188/326 (57%), Positives = 237/326 (72%), Gaps = 4/326 (1%)
 Frame = -1

Query: 1410 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1231
            MSSG  R+VSR DIQLVQNLIERCLQLYMN+KEV+DTLL QAKIEPGFTELVWQKLEEEN
Sbjct: 1    MSSGTVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60

Query: 1230 REFFKAYHVRLMVKHQITVFNRLLDRQMELMRTMYPAGVAPLSIPNGSH-SSMHQGQAPF 1054
            REFFKAY++RLMVKHQI  FN+LL++Q+  MR M+P GVA +   NGSH  SM+Q Q   
Sbjct: 61   REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHLQSMNQKQL-C 119

Query: 1053 FVAEHAVPLPRTESIHHPIGP--PTTFSNGRPSIHGNMQSVDDTALHVGRMDVSSNMHSA 880
            + +EH     ++ES HHP+       F NG  +++ N+ S  + + H  R+D S NM S+
Sbjct: 120  YPSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNMLSS 179

Query: 879  QNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPTIGDTAVPSFGSVEPGPQP 700
            Q ++M M+ GMNG +IKSE  + + ++F +G + N L     +GDT++P+F S E   QP
Sbjct: 180  QTTNMPMMQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSIPNF-SNESNNQP 238

Query: 699  LNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESYSRSPFLGTDVGDFFNSPG 520
            L+  LL+ + S FGFLGQIPRNFSLSD+ ADFSQSSEILESY RSPFL  +  +F +S  
Sbjct: 239  LSDPLLEAEASTFGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVPNAENFLDSRD 298

Query: 519  R-DCQGDNRRLDTISEGLSYDDFCSE 445
            R + QGDN+RLDTISEG SYD+  SE
Sbjct: 299  RGEYQGDNKRLDTISEGFSYDNIGSE 324


>gb|AAF02817.1|AC009400_13 unknown protein [Arabidopsis thaliana]
          Length = 327

 Score =  343 bits (879), Expect = 9e-92
 Identities = 185/328 (56%), Positives = 235/328 (71%), Gaps = 6/328 (1%)
 Frame = -1

Query: 1410 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1231
            MSSG  R+VSR DIQLVQNLIERCLQLYMN+KEV+DTLL QAKIEPGFTELVWQKLEEEN
Sbjct: 1    MSSGTVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60

Query: 1230 REFFKAYHVRLMVKHQITVFNRLLDRQMELMRTMYPAGVAPLSIPNGSH---SSMHQGQA 1060
            REFFKAY++RLMVKHQI  FN+LL++Q+  MR M+P GVA +   NGSH   S +   + 
Sbjct: 61   REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHLQSSKILNQKQ 120

Query: 1059 PFFVAEHAVPLPRTESIHHPIGP--PTTFSNGRPSIHGNMQSVDDTALHVGRMDVSSNMH 886
              + +EH     ++ES HHP+       F NG  +++ N+ S  + + H  R+D S NM 
Sbjct: 121  LCYPSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNML 180

Query: 885  SAQNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPTIGDTAVPSFGSVEPGP 706
            S+Q ++M M+ GMNG +IKSE  + + ++F +G + N L     +GDT++P+F S E   
Sbjct: 181  SSQTTNMPMMQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSIPNF-SNESNN 239

Query: 705  QPLNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESYSRSPFLGTDVGDFFNS 526
            QPL+  LL+ + S FGFLGQIPRNFSLSD+ ADFSQSSEILESY RSPFL  +  +F +S
Sbjct: 240  QPLSDPLLEAEASTFGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVPNAENFLDS 299

Query: 525  PGR-DCQGDNRRLDTISEGLSYDDFCSE 445
              R + QGDN+RLDTISEG SYD+  SE
Sbjct: 300  RDRGEYQGDNKRLDTISEGFSYDNIGSE 327


>ref|XP_002884785.1| hypothetical protein ARALYDRAFT_478351 [Arabidopsis lyrata subsp.
            lyrata] gi|297330625|gb|EFH61044.1| hypothetical protein
            ARALYDRAFT_478351 [Arabidopsis lyrata subsp. lyrata]
          Length = 321

 Score =  341 bits (875), Expect = 3e-91
 Identities = 188/326 (57%), Positives = 235/326 (72%), Gaps = 4/326 (1%)
 Frame = -1

Query: 1410 MSSGENRKVSRDDIQLVQNLIERCLQLYMNRKEVIDTLLAQAKIEPGFTELVWQKLEEEN 1231
            MSSG  R+VSR DIQLVQNLIERCLQLYMN+KEV+DTLL QAKIEPGFTELVWQKLEEEN
Sbjct: 1    MSSGSVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60

Query: 1230 REFFKAYHVRLMVKHQITVFNRLLDRQMELMRTMYPAGVAPLSIPNGSH-SSMHQGQAPF 1054
            REFFKAY++RLMVKHQI  FN+LL++Q+  MR M+P GVA +   NGSH  SM+Q Q   
Sbjct: 61   REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHIQSMNQKQL-C 119

Query: 1053 FVAEHAVPLPRTESIHHPIGP--PTTFSNGRPSIHGNMQSVDDTALHVGRMDVSSNMHSA 880
            + +EH     ++ES HHP+       F NG  +++ N+ S  + + H  R+D S NM S 
Sbjct: 120  YPSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNMLS- 178

Query: 879  QNSHMRMIHGMNGVVIKSEPGYGDGSAFTFGADGNVLGMPPTIGDTAVPSFGSVEPGPQP 700
              SHM M+ GMNG +IKSE  + + ++F +G + N L     +GDT++ +F S E   QP
Sbjct: 179  --SHMPMVQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSISNF-SNESNNQP 235

Query: 699  LNGSLLDTDTSLFGFLGQIPRNFSLSDIAADFSQSSEILESYSRSPFLGTDVGDFFNSPG 520
            L+ +LL+ +TS  GFLGQIPRNFSLSD+ ADFSQSSEILESY RSPFL  +  +F +S  
Sbjct: 236  LSDTLLEAETSTIGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVANAENFLDSRE 295

Query: 519  R-DCQGDNRRLDTISEGLSYDDFCSE 445
            R + QGDN+RLDTISEG SYD+  SE
Sbjct: 296  RGEYQGDNKRLDTISEGFSYDNIGSE 321


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