BLASTX nr result

ID: Coptis25_contig00012648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012648
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309119.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
gb|ABK96465.1| unknown [Populus trichocarpa x Populus deltoides]      126   2e-27
emb|CBI30424.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002274014.1| PREDICTED: uncharacterized protein LOC100242...   110   9e-23
ref|XP_002533892.1| conserved hypothetical protein [Ricinus comm...   106   2e-21

>ref|XP_002309119.1| predicted protein [Populus trichocarpa] gi|222855095|gb|EEE92642.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  126 bits (317), Expect = 2e-27
 Identities = 72/110 (65%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
 Frame = -2

Query: 324 MNTLKAIQNCFPPSKHVFLKSQKLPS--RNSIQLLCKXXXXXXXXXXXEGDIKKQDLLVK 151
           M +LKAI   F P+ H F  ++K PS  +NSI  LCK           EGD KKQ+LL K
Sbjct: 1   MFSLKAINTSFAPTNHGFFHTRK-PSNTKNSILFLCKSNDSDSEAPPPEGDTKKQELLAK 59

Query: 150 IAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIGEDTLKGLDEAEAR 1
           IAMLQAQKVRLTDYLDER  YLTQFAEEANAEFD+IGED LKGLDEA AR
Sbjct: 60  IAMLQAQKVRLTDYLDERSDYLTQFAEEANAEFDKIGEDALKGLDEAGAR 109


>gb|ABK96465.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  126 bits (317), Expect = 2e-27
 Identities = 72/110 (65%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
 Frame = -2

Query: 324 MNTLKAIQNCFPPSKHVFLKSQKLPS--RNSIQLLCKXXXXXXXXXXXEGDIKKQDLLVK 151
           M +LKAI   F P+ H F  ++K PS  +NSI  LCK           EGD KKQ+LL K
Sbjct: 1   MFSLKAINTSFAPTNHGFFHTRK-PSNTKNSILFLCKSNDSDSEAPPPEGDTKKQELLAK 59

Query: 150 IAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIGEDTLKGLDEAEAR 1
           IAMLQAQKVRLTDYLDER  YLTQFAEEANAEFD+IGED LKGLDEA AR
Sbjct: 60  IAMLQAQKVRLTDYLDERSDYLTQFAEEANAEFDKIGEDALKGLDEAGAR 109


>emb|CBI30424.3| unnamed protein product [Vitis vinifera]
          Length = 1454

 Score =  119 bits (297), Expect = 3e-25
 Identities = 69/133 (51%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
 Frame = -2

Query: 384  SILSFLSFSVHS--TPTYKKKRMNTLKAIQNCFPPSKHVFLKSQKLPSRNSIQLLCKXXX 211
            +ILS L+F V+      Y  K+M  LKA Q  F  +K+V   +++LP + S   LCK   
Sbjct: 1175 AILSLLNFLVYLWIAKWYTYKKMIALKATQTSFTSTKYVLFHTRRLPKKRSTLSLCKSND 1234

Query: 210  XXXXXXXXE---GDIKKQDLLVKIAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIG 40
                        GD +KQ+LL +IAMLQAQKVRLTDYLDER  YLTQFAEEANAEFD+IG
Sbjct: 1235 DDSSPSDGSLPEGDSRKQELLARIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDQIG 1294

Query: 39   EDTLKGLDEAEAR 1
            E+ LK L+EA  R
Sbjct: 1295 ENALKELEEAGTR 1307


>ref|XP_002274014.1| PREDICTED: uncharacterized protein LOC100242508 [Vitis vinifera]
          Length = 258

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/111 (54%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
 Frame = -2

Query: 324 MNTLKAIQNCFPPSKHVFLKSQKLPSRNSIQLLCKXXXXXXXXXXXE---GDIKKQDLLV 154
           M  LKA Q  F  +K+V   +++LP + S   LCK               GD +KQ+LL 
Sbjct: 1   MIALKATQTSFTSTKYVLFHTRRLPKKRSTLSLCKSNDDDSSPSDGSLPEGDSRKQELLA 60

Query: 153 KIAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIGEDTLKGLDEAEAR 1
           +IAMLQAQKVRLTDYLDER  YLTQFAEEANAEFD+IGE+ LK L+EA  R
Sbjct: 61  RIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDQIGENALKELEEAGTR 111


>ref|XP_002533892.1| conserved hypothetical protein [Ricinus communis]
           gi|223526156|gb|EEF28492.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  106 bits (264), Expect = 2e-21
 Identities = 59/117 (50%), Positives = 74/117 (63%), Gaps = 9/117 (7%)
 Frame = -2

Query: 324 MNTLKAIQNCFPPSKHVFLKSQKLPS-RNSIQLLCKXXXXXXXXXXXE--------GDIK 172
           M  LKAI   F P+KH    +++  + +N+I  LCK                    GD +
Sbjct: 1   MIALKAIHTSFTPTKHALFHTRRPTNQKNTIWCLCKPNNNNSDSNSNSDSEASPPEGDTR 60

Query: 171 KQDLLVKIAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIGEDTLKGLDEAEAR 1
           KQ+LL +IAMLQ +KVRLTDY+DER  YL+QF EEA+AEFD+IGED LKGLDEA AR
Sbjct: 61  KQELLARIAMLQTEKVRLTDYIDERSSYLSQFTEEASAEFDKIGEDALKGLDEAGAR 117


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